dlb (dlb,LOC107746357,LOC107596148,LOC107683914,LOC108260005,LOC108444019)


Basic Information

Item Value
gene id dlb
gene name dlb,LOC107746357,LOC107596148,LOC107683914,LOC108260005,LOC108444019
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13465532 ~ 13470881 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238586.1
GCAGGAGAACGAAGACGACCGGTGCGCTTTCCCTCTGAAGACACAGTGGACTTTTATGGACCTGACGAGGAATTCGAACCAGGACACCGAATAGTTTTTTGCAAACACTTTGAAGCTTGGGAAGTAACGGATGAAGATACCTGTGTGCTATTGTAATAAAGTTTAGGATTAACTGAGCGAGATGGCGCATCTGTCTTTGTACTGCCTGCTGTCTGTGTCGCTTTTGCAGTCGGTGGCTTCCTCCGGTGTGTTTGAACTGAAAGTTCACTCGTTCAGCACGACGCGGCGCTTCTGCAGGAGGACGCGAGACTGCAACATCTTTTTCAGGATTTGCCTGAAGCATTCGGAAGACGTTATATCCGCTGAGCCTCCGTGCACCTTCGGAACCGGGCAGACAAACGTCCTGCGAGCGGATCAGAGCTCTATAGCCGGCAGCGCAGCCATTCGGGTGCCTTTCCACTTCAAGTGGCCGggaacaTTTTCTCTTATTATTGAAGCATGGAATGCTGAGTCTCCAAAAGAGCATCAGGACTACACAGAGAATCAAAACAACCTGATCAGTCGTTTAGCAACGCGAAGGCGCTCGGCGATTGGAGAAGACTGGTCTCAGGATGTTCATTTTGGAGACCAGAGCGAGCTCCGTTACTCGTATCATGTTTTCTGTGATGAGTTTTACTTCGGTGAGGCGTGTTCGGATTACTGCCGTCCTCGTGACGATACACTGGGACACTACACATGCGATGAGAACGGAAACAGGGAATGCCTGGAGGGATGGCAGGGAGACTACTGCTCTGACCCCATCTGCTCTTCGGACTGCAGCGAGCGGCACGGTTACTGCGAGTCACCTGGTGAGTGCAAGTGTCGCCTGGGATGGCAGGGGCCGTCCTGCAGCGAGTGTGTGCATTACCCGGGATGCCTACACGGGACCTGCTCACAGCCatggcagtgtgtgtgtaaagagggCTGGGGAGGCCTCTTCTGTAACCAGGACCTCAACTACTGCACCAACCACAAACCCTGTGCTAATGGCGCCACCTGCACCAACACAGGACAGGGCAGCTATACCTGCACCTGCCGGCCAGGATATGGGGGCACAAACTGTGAGCTGGAGATTAACGAGTGTGACTGCAACCCCTGCAAGAATGGTGGCAGTTGCAACGATTTGGAGAACGATTACTCTTGTACATGTCCTCAGGGATTCTATGGGAAGAACTGTGAGATCATTGCAATGACATGCGCAGATGACCCCTGCTTTAACGGAGGGACGTGTGAAGAAAAATTCACTGGTGGCTACGTCTGCCGCTGCCCCCCAACATTTACTGGATCCAACTGTGAGAAGAGACTGGACCGCTGCAGCCACAAACCTTGTGCTAACGGTGGTGAGTGCGTGGATCTGGGCGCTAGTGCTCTGTGCCGCTGTCGCCCTGGGTTCACCGGCCCTCGCTGTGAGATGAACATAGACGACTGTGCCCGCTACCCATGCCAAAATGCCGGAACATGCCAAGACGGCATTAATGATTATACCTGCACCTGCACACTAGGTTTCACTGGCAAAAACTGCAGCCTCAGAGCAGATGCTTGTCTCACAAACCCATGCCTCCACGGGGGAACGTGCTACACACACTTCTCCGGGCCAGTGTGCCAGTGTGTGCCTGGGTTTATGGGTCCAAACTGTGAGTTTCCCGTGCAGGGGGGTATGGAGATGATGGCGCCTCGCGTTGGACGGACCTCGCCTTCAGCGGTGGCGGTGTCATGTGTGTTAGGTGTGCTGGCTGTGTTTTTGGGAGTGTGTGTGGGACTGGTGGTGATCAGGAGGAGAAGGCATAGACTGCGAAGACAGCAGCTATGCGATTCTGTGTTTAATGATTTGGAGACAGTAAATAATTTAGACAGGCAGCACTATCCCTATGACAGAGACTACAGTCAGGTGAAACCCTGCAACACTGAAGGCAGAATTTCACTGGCGGCTTCTCACACACTGCCTGCTGGGCAGGACTTCCTGTGGAGTGCTGGAGGAGGACTCAGATAAGGCAACACTTCTACACTCATACACTCATGCATAGACTCATGTAGACAAGTGAGcgtaaacacagacacacaaactcacatgCAGGGATAAGAATTTGGATGTAGCACTTGCTTTTTGTCTTAAttattatgaatgaatgaatgaatgaagtatGTAAGACTGAATAAGGGATTGGACCTTTGCCATCTGTATAGGTGGGACACTGTAAACCAAAAACCAAGAGAAATAAACAAGCACATTGTTGTGCTGGGCTTTGTGAATCTGTATTTCCATATGAAGACAGACACAAGCCctgaaagctgaaaaaactTAGGTTGCAGAACTCACAGAGAACTGATATCTTTATACAAAGataaataagtgaaaataaCTCTATACAAAGAGagcttagtaaaaaaaaatacctctattgaaagagaaagaagttAAACTGAAGAGCAGGATTAGATGTTCTCTAGTCAAACTCTGGGCTTTGTATAGGActcattaaaaacctttttttcctcttataaGTATGAGAATATCACAACTGTTGATTTGCCAGGATGTTGCTAGCAACaggtgttttaataataataaaaaagtaataataaaaaaattcaagatGTGCAGCAACAGTCAGAAATATGATAAAACTGTGTTCTTAAGACCAAATGGTAAGATTTTGCTCCAGTTTTGTATTGCGTATTAAGCAGTGTGTTTTCTTCCTCGACTGATACGGGGAATTTTTTTCattggtttttaaatgttaaattacaaaaacttcTGATTTTCTTAAATGGGGTTTATGtctaatgaatgtttatttcttttgccaGAAGTTTCCTATTAATTTAATCCTAAGTTTACGCCTAAGtttctattttgcatttttgtactTTGCTTTCAATCATTGTCTTGTCTTTGTAAAgaatttatgttaatttattttgtatatgtcTTTGTTActtcaatgaaataaataaatta

Function

symbol description
dlb Predicted to enable Notch binding activity. Acts upstream of or within diencephalon development and midbrain development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Is expressed in several structures, including adenohypophyseal placode; digestive system; ectoderm; nervous system; and neural plate. Human ortholog(s) of this gene implicated in dysostosis and spondylocostal dysostosis. Orthologous to human DLL1 (delta like canonical Notch ligand 1) and DLL3 (delta like canonical Notch ligand 3).

NR:

description
PREDICTED: delta-like protein B

GO:

id name namespace
GO:0021536 diencephalon development biological_process
GO:0007219 Notch signaling pathway biological_process
GO:0030154 cell differentiation biological_process
GO:0030901 midbrain development biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238586.1 True 2998 mRNA 0.46 7 13465532 13470881

Neighbor

gene id symbol gene type direction distance location
zgc:153990 LOC107548484,LOC107746356,LOC107700225,LOC107655905,LOC107757517,LOC107596149 coding upstream 5422 13454506 ~ 13460110 (+)
capns1a capns1a,LOC107655908,LOC107700232,LOC107548486,LOC107746417 coding upstream 11308 13447355 ~ 13454224 (+)
alkbh6 LOC107746424,LOC107548452,LOC107700897,LOC107655907,LOC107757515,LOC107596150 coding upstream 18332 13441448 ~ 13447200 (+)
nova1 nova1,LOC107757545,LOC107655909,LOC107700904,LOC107746355,LOC107548487,LOC103377877 coding upstream 27596 13419356 ~ 13437936 (+)
micu2 LOC107700905,LOC107746354,LOC107596152,LOC107655910,LOC107757544,LOC107548488 coding upstream 46564 13412620 ~ 13418968 (+)
ppp1r14aa ppp1r14aa,LOC107596215,LOC107746358,LOC107548483,LOC107655902,LOC107757548 coding downstream 119 13471000 ~ 13475009 (+)
exoc3l2a LOC107746360,LOC107700233,LOC107548482,LOC107757547,LOC107596146,LOC107700224 coding downstream 5297 13476178 ~ 13487943 (+)
mark4a mark4a,LOC107746361,LOC107596145,LOC107700234,LOC105006905,LOC107693438,LOC108444027 coding downstream 27303 13498184 ~ 13517184 (+)
nccrp1 nccrp1,LOC107548479,LOC107757518,LOC107693441,LOC107596142,LOC107700228,LOC107746425 coding downstream 57470 13528351 ~ 13530862 (+)
slc8a2a slc8a2a,LOC107757550,LOC107693442,LOC107596143 coding downstream 60396 13531277 ~ 13548200 (+)
G36109 NA non-coding upstream 141149 13324033 ~ 13324383 (+)
LOC122345423 NA non-coding upstream 152880 13299755 ~ 13312652 (+)
G36062 NA non-coding upstream 356679 13108632 ~ 13108853 (+)
G35905 NA non-coding upstream 579598 12885331 ~ 12885934 (+)
G35904 NA non-coding upstream 580248 12885005 ~ 12885284 (+)
G36140 NA non-coding downstream 49092 13519973 ~ 13521608 (+)
G36141 NA non-coding downstream 96096 13566977 ~ 13580798 (+)
G36168 NA non-coding downstream 177045 13647926 ~ 13648538 (+)
G36191 NA non-coding downstream 249904 13720785 ~ 13721566 (+)
G36198 NA non-coding downstream 261088 13731969 ~ 13732456 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 658181 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 760287 12703352 ~ 12705245 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other upstream 936742 12514013 ~ 12528790 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other upstream 1209860 12249138 ~ 12255672 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other upstream 1522422 11924228 ~ 11943110 (+)
ins ins,LOC107596207 other downstream 513216 13984097 ~ 13985706 (+)
G36495 NA other downstream 819539 14290420 ~ 14292500 (+)
LOC122345142 NA other downstream 829162 14300043 ~ 14305304 (+)
LOC122345214 NA other downstream 862142 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 876681 14347562 ~ 14349991 (+)

Expression


Co-expression Network