fgf10b (fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653)


Basic Information

Item Value
gene id fgf10b
gene name fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 301638 ~ 313028 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238651.1
GAGGGGTGAGGACAGCAGCATTTCTGTGAACCTCCCGGAGGTAGGAGATCACATCAGAAGACAGGATGCCACGAACAGGGTCGTTTTGACGCACGTTCCCAGGAAACGCAAGAGGAATAAGTGCTGCCATGATAATCACTCCCAAATGGGATTAATCAAGCGCTTTATCTCAGCATCAGAAGCTTCACAGACTCGCTCCTCAGCCTAATTCCACAACTTCATGCTTTCTTCACCGGTCTCGAGTGGAGTTCTCTGGAGCGAGAGGCATCCATGCACATTCACTGAGCAGCATGTTCCATGAGGAGTACCATGAGGAGATGGACAGTGAGTAAGAGTGTGTCTGCATGCTGGTCGGTGCGTGTCGTCTATCTTCTCGCCGTCTCCGTGATCTTCGCGTCCAGCGTCACCTGCCGCAGCGCATGTCCCGTGCATCGGGCGCTCAGGGTCGCCAACTCCTCATCcgcctccgcctccgcctccACCTCCGGGCGGCATGTGCGCAGCTACGTTCACCTCCAGGGAGACGTGCGCCAGAGGAAACTCTTCTCCTTCCAGAAGTTCTTCCTTAGGATCGGGAAAGACGGGAGAGTCAACGGCACCAAGAGCAAAGACGATCCCTTCAgTATTCTGGAGATCACGTCAGTGGATGTTGGGATCGTTGCCATCAGAGGAATCGGCAGTAACCTTTACCTGGCTATTAGTAAGAGAGGAGAACTGTATGGAGCGAGAAACTACGGCATAAACTGCCGTCTGAAGGAGCGCATCGAGGAGAACGGGTACAACACATACGCTTCTGCCGAGTGGAGGAACAAGAAGCGTCAGATGTTTGTGGGCCTGAGCGCTCACGGAAGACCCCTGCGTGGGAGAAAGACCCGCAGGAAGAACACAGCTACACACTTCTTACCCATACTGGTGTGACTTTCGTTCATAATGCCGACGGGGCCGGAGAGAGATCGGTGATGAAGACTGTCCACACGTGACTCTGTAGAGGCTGTGCTCCTTCACGGCGCTAGACGAAATAATATCCTCATGCCAGCTGACATTAAATTGTAAACATGCTCGAAAAGAGCAAAAAATGCGGGCTTTCGTTTCCATTGTGCATCATTCCAGTAATCTAAAATTATGGATTATGTGTGAAAGACCTTTCTTCAAACTCTCTTTGATAGGATCATGTGCTTAAGAATGTctgctttcatttctttctgaCGGACGTGAACATCCTGTGGGAGCAGCTCTTGTGGGAGGCTGCATGCGTCgcacagagaaagagatagTGGGGATGTATATGAGAAATTTGTATCTTCAGAAAACTGTTTTGGActgctttgaaataaataaattatttatttgtattgtatttaagtaaaatactctaaaaaaacatattaaaagcatataaaatgGATAACCTCTAATCCTgtgaaataaaatctattttgttA

Function

symbol description
fgf10 Enables heparin binding activity; receptor ligand activity; and type 2 fibroblast growth factor receptor binding activity. Involved in several processes, including animal organ development; positive regulation of cell population proliferation; and positive regulation of intracellular signal transduction. Acts upstream of or within several processes, including fibroblast growth factor receptor signaling pathway involved in mammary gland specification; lung development; and positive regulation of urothelial cell proliferation. Located in several cellular components, including cell surface; extracellular space; and nucleus. Colocalizes with collagen-containing extracellular matrix. Implicated in LADD syndrome and aplasia of lacrimal and salivary glands.

NR:

description
PREDICTED: fibroblast growth factor 10-like

GO:

id name namespace
GO:0008543 fibroblast growth factor receptor signaling pathway biological_process
GO:0005576 extracellular region cellular_component
GO:0005104 fibroblast growth factor receptor binding molecular_function
GO:0008083 growth factor activity molecular_function

KEGG:

id description
K04358 FGF; fibroblast growth factor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238651.1 True 1442 mRNA 0.48 3 301638 313028

Neighbor

gene id symbol gene type direction distance location
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding downstream 2257 287133 ~ 299381 (-)
paip1 paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649 coding downstream 15340 278951 ~ 286298 (-)
c5h5orf34 LOC107750289,LOC107658216,LOC107567649 coding downstream 23354 273168 ~ 278284 (-)
LOC122344789 LOC107704867,LOC107594577 coding downstream 28823 262368 ~ 272815 (-)
lifra LOC107594555,LOC107704172,LOC107658266,LOC107725078,LOC107750295,LOC107567645 coding downstream 79084 205102 ~ 222554 (-)
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding upstream 3813 316841 ~ 339731 (-)
LOC122345880 NA coding upstream 58643 371671 ~ 372818 (-)
si:ch211-12e13.10 NA coding upstream 85391 398419 ~ 399683 (-)
lrp13 LOC107725159,LOC107594583,LOC107704910 coding upstream 86964 399992 ~ 411093 (-)
gak gak,LOC107704343,LOC107667379 coding upstream 174016 487044 ~ 511879 (-)
G32086 NA non-coding downstream 97102 162490 ~ 204536 (-)
G32102 NA non-coding downstream 275746 25514 ~ 25892 (-)
G32100 NA non-coding downstream 284123 16470 ~ 17515 (-)
G32099 NA non-coding downstream 286333 12703 ~ 15305 (-)
G32098 NA non-coding downstream 289769 11445 ~ 11869 (-)
G32150 NA non-coding upstream 37939 350967 ~ 352079 (-)
G32177 NA non-coding upstream 118602 431630 ~ 431890 (-)
G32186 NA non-coding upstream 143089 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 145452 458480 ~ 479881 (-)
G32191 NA non-coding upstream 152036 465064 ~ 470468 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 39967 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 265290 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 266921 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 277689 20139 ~ 23949 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other upstream 69024 382052 ~ 387878 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 243626 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 309486 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 999576 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 1029578 1342606 ~ 1354414 (-)

Expression


Co-expression Network