LOC122344973


Basic Information

Item Value
gene id LOC122344973
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 30540497 ~ 30542440 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238653.1
AGCAGAAGAGAGCTGGTAAGCGGGGCGTTTCTGCTCTGGATTGCTTCACCGGGGAGGTCACCCTTTTACCTTTAAATATCCAGGAGAACGAGAGCTACATTAGATGCTGTCTCACGACCTGAAGAGCGTCTCTCATCCAGAAGCCTCTGACTGAAACGCTTGGGGTAACGAGAAACGGAAAGACCTTCTGTACCAGACTGAAATTTCCTCTTCTTTAGGATCCTAATATAAAGAACCATGTGGAGTGACATCTTCTACCCTGAAAATCCTTGGAGAAGGGAGCAGCTCATCCGTAGAAGTCAAGAGCTTCACGATCTGATGAAGAACAACTTCAGAGCCACCAACCAACTGATTGATGTCATGAACAAGTACTTGAGCTGCTCCTTCGAACACATCAAATTGAACGAGAGCGCGACTCTTCGAGAGAACTGTGACATGATCATTGGATCCATTCATAAGATACAGGCAGAAGTAGAGAGGATTGATGTAAAGCTGAAGGAGAAGTTGGAGCCCACTCTGTACGAGAAACTGAGAAACCTGCCTTCTCTGTCTTCTATAGATTTTAAAGCCATTTCAACTGCATTCACAGTGATTTGTGGCGTTGGAACTCTTGGAACCTCTgctttatttatccatttagtGAGGAATGGAACTATTCTGGCAAACGTATCACGTACGTTTCTTAAGATTGGAGCAACTACGTTAGGCACTATTGGGCTGGCGGTGGTGTTCTTGGGGATCGATATGATTATTGAGGCCATCAAGGGGAAAATTGAGGGAGATAAACTTAAGGCGGAGCTGGATCAGTATGACCAAGCTTTGCAGGAATTCAGACCGGCGTCTGAAAAATATCAGGATAACATTACCTATGTCCTAGCAAAAATtgagattttaaatgaatacaaaatgtTAGGTTGAAATGTTTGCTGCATTCATGCTTAAAACATTCAGGAATACAGGAGAATGGAAGTAATGTGAAATGATttgttgaaaaagaaaataatcatgaaataaaattcTTCTGATATGAAAA
>XM_043238655.1
AGCAGAAGAGAGCTGGTAAGCGGGGCGTTTCTGCTCTGGATTGCTTCACCGGGGAGGTCACCCTTTTACCTTTAAATATCCAGGAGAACGAGAGCTACATTAGATGCTGTCTCACGACCTGAAGAGCGTCTCTCATCCAGAAGCCTCTGACTGAAACGCTTGGGGTAACGAGAAACGGAAAGACCTTCTGTACCAGACTGAAAGATCCTAATATAAAGAACCATGTGGAGTGACATCTTCTACCCTGAAAATCCTTGGAGAAGGGAGCAGCTCATCCGTAGAAGTCAAGAGCTTCACGATCTGATGAAGAACAACTTCAGAGCCACCAACCAACTGATTGATGTCATGAACAAGTACTTGAGCTGCTCCTTCGAACACATCAAATTGAACGAGAGCGCGACTCTTCGAGAGAACTGTGACATGATCATTGGATCCATTCATAAGATACAGGCAGAAGTAGAGAGGATTGATGTAAAGCTGAAGGAGAAGTTGGAGCCCACTCTGTACGAGAAACTGAGAAACCTGCCTTCTCTGTCTTCTATAGATTTTAAAGCCATTTCAACTGCATTCACAGTGATTTGTGGCGTTGGAACTCTTGGAACCTCTgctttatttatccatttagtGAGGAATGGAACTATTCTGGCAAACGTATCACGTACGTTTCTTAAGATTGGAGCAACTACGTTAGGCACTATTGGGCTGGCGGTGGTGTTCTTGGGGATCGATATGATTATTGAGGCCATCAAGGGGAAAATTGAGGGAGATAAACTTAAGGCGGAGCTGGATCAGTATGACCAAGCTTTGCAGGAATTCAGACCGGCGTCTGAAAAATATCAGGATAACATTACCTATGTCCTAGCAAAAATtgagattttaaatgaatacaaaatgtTAGGTTGAAATGTTTGCTGCATTCATGCTTAAAACATTCAGGAATACAGGAGAATGGAAGTAATGTGAAATGATttgttgaaaaagaaaataatcatgaaataaaattcTTCTGATATGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238653.1 True 1033 mRNA 0.42 3 30540497 30542440
XM_043238655.1 False 1018 mRNA 0.42 3 30540497 30542440

Neighbor

gene id symbol gene type direction distance location
LOC122345715 LOC107687242,LOC107717337,LOC107558070 coding downstream 2582 30535834 ~ 30537915 (-)
LOC122345124 si:zfos-128g4.1,LOC107675886,LOC107577831 coding downstream 17078 30520606 ~ 30523419 (-)
mbd2 mbd2,LOC107717343,LOC107565141,LOC108438699,LOC108260323,LOC105902559 coding downstream 29218 30491031 ~ 30511279 (-)
trabd2a trabd2a,LOC107558059,LOC107570885,LOC107717329 coding downstream 376480 30122226 ~ 30164017 (-)
june LOC107687249,LOC107721038,LOC107563389,LOC107684195,LOC107735627 coding downstream 506285 30027830 ~ 30034212 (-)
LOC122344972 NA coding upstream 33848 30576288 ~ 30580328 (-)
ass1 ass1,LOC107740768,LOC107687233,LOC107689608 coding upstream 79764 30622204 ~ 30644747 (-)
surf4 surf4,LOC107740232,LOC107689610,LOC105890423,LOC103376134 coding upstream 103846 30646286 ~ 30652310 (-)
surf2 surf2,LOC107740795,LOC107581206,LOC107743090 coding upstream 110723 30653163 ~ 30655957 (-)
ciz1a ciz1a,LOC107687257,LOC107571633,LOC107740230,LOC107689607 coding upstream 117679 30660119 ~ 30672096 (-)
G40684 NA non-coding downstream 22042 30516065 ~ 30518455 (-)
G40680 NA non-coding downstream 27527 30504796 ~ 30512970 (-)
G40671 NA non-coding downstream 49619 30490514 ~ 30490878 (-)
G40677 NA non-coding downstream 56255 30484016 ~ 30484242 (-)
G40676 NA non-coding downstream 58271 30482021 ~ 30482226 (-)
G40670 ythdc2 non-coding upstream 21677 30564117 ~ 30564377 (-)
G40672 NA non-coding upstream 23244 30565684 ~ 30566156 (-)
G40698 NA non-coding upstream 24811 30567251 ~ 30570100 (-)
G40701 NA non-coding upstream 47757 30590197 ~ 30590640 (-)
LOC122345983 NA non-coding upstream 166333 30708773 ~ 30710678 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other downstream 446921 30087966 ~ 30093576 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other downstream 611822 29924702 ~ 29928675 (-)
eng LOC107562335,LOC107704777,LOC107741503 other downstream 885436 29614719 ~ 29655061 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 1050293 29460585 ~ 29490204 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other downstream 1214382 29323982 ~ 29326115 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other upstream 48403 30590843 ~ 30613141 (-)
G40711 NA other upstream 88588 30631028 ~ 30733360 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 247193 30789633 ~ 30792719 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other upstream 275292 30817732 ~ 30826358 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other upstream 788909 31331349 ~ 31350449 (-)

Expression


Co-expression Network