CI01000004_15687242_15691238


Basic Information

Item Value
gene id CI01000004_15687242_15691238
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15685262 ~ 15691277 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15687242_15691238.mRNA
GTATAAATAGCACACATGTTCTTGTATGAACCGGTCCCTTGTGTTCTTCTCTGCTCTTCTATTTAATACTCTATTTAATAATATACCTTGCTAATAAGTATGGCTTCAAAAGACTTTGAGTATAAAAGATGAGTTGAATGAATCTTATGATATTTTATGATACTTTTTTATGCTTCTATACTTTTTATGCACCCCCCTCCCCCCTTTTATTTGTTAATTTAAGTAATTTTGGAGCTCAACATCTCCTTTCCCTAATGATTTTTATTATACGGAAAAGAGTGGCTATTCTTCAGAATTTCTCCTTTAGTGTTCCACAGAAGAAAGAAAAACGGTATGGAACGTGATGGTGAGTACATGATGTCAGCATTCATATTTGGTGGATTATTTCAGAAAAGTCAAAGCAGGTAAGAGCAGGTAGTAGGGTGGGTGCTGAGACGTGAAAGTGTGTGATACACTTCCTCCACTCCTTCCTGCAATCTTCTTGCATGCTGTAGCCTGCAGGTTAGGAAAAAGAACCTTGAACTTTCATTAAAAATAAAGACATGAAGAAATTGGTGTGTTGAAATATTGGGAGGAGGAGGAGGATGGAGGGGCGGAGCAAATTTGAACAATATGTCAGAAGACTAGCAGTTTAGTAACAGAGAGAAGCAGTAGGGCAAGTTACAATTAAATAGTGCATATAAATTTGATAGAGTGAGATCACTGAACAACAATAAGAACTTAAGTAATTTAGGATAAGCTATGTGAAAGTTTATCTGAGAGACAGGGGAAAGAAATAGAGAGACCAACTTGGAGACCACACAACCTAACCAGGTCCATCTGGTCACTTCAGGGAAAATACATTTCAGCCATTCGGATCTAATCAAGTGTATTGGTGAGTTACAAGAAAACCCTCTTTGATTTTCAAACCAGGAATACATTACAGTCCATCTTATTTCTTATATTTTCCATCTCCAGTTTGTCCTTTCAGGCCACTTTCTGTTTGATGCAACTCTGTCCAGTTTCTCAATTTCATCTTTGCTGTTCAGAACCAATTGTAGTGATCACAATCAGACTGGACAATCTTATCTTCTTACACTGTAGGGATTGCAATACTGAATAGGTTCACAGTTCAATTTGTGAATATGTTTTTTCTTTAAATGCTTTGCTGTTCTTTTAACTTGACTTTAAATATGGTATTCTTTTCTTGACAATTGCTGTAAAATAAAGTTTATATAAGAGAACTTTTGGGATGAGGGTGAGGACGTGATCCTCTGATTGGTGGATATTACAGCATCTGAGTGCCTTTTTGTGATCAAGACCGCAGAGCAAGTTGTAGCACGTCTTTTCCATGTTGTTTTTCATTGATGGCAGATTACTGGCTGAATTTCAATAATTACATGGTTGCTGAGAGCCCATCCTTGATGCTGGCTCATACTTTATTTGCCCCTGAAGGAAACATTATTAAAGAAAAAATCCTCAATAATTCATAGTATATCATCTGAATTGGATAACATGGTCAAATATAATTGTTTTTCTTTTTCTCGACTGATCATGTGCTAATAATAGTTTCAAGTTAAAGTAAAAAGTTTAGATTTTTTCAGATATTTTTCAAGATTTTTATAGGCTACATTTTACAATTTCTTCTTTCTACTTCAAAATGTCATGCTTAATTCAATGTGTTACTTGCCATTTCTTTGTAATTATTTGTGAAATTTACTAGTAAAGTGAAAATAGTTTATAAAAAATAAAAAACAGCTGACAAATAAATAAATATATAAATAAATTATCTATACTATAAGCTAGTTTGCCTGTCTTAGCTGATTTTAGGATAGTCTGTCGGCTGGTTTTAAGAAAAATTTAATATTTTTTTTAGCAGGGTTATAGGGTTATGAAAGCATTTCCAGCTTCATAACATTGCTTTCTGATTCCATCAGTTCTTCTGACACCTTCCTGATGGAATCAGGAAATCAGAGCACCTCCACTGTGAACATGACAACAATGAATCCTGATAAGAGCACTGTGGGTAACAGTATTTCTGTTGCTTTTGGGGCCCTCATCCTCAGCGTCGTCTTCCTCCTGGGTGTTCCTGGCAACCTCTTCATTATCTGGAGCATCCTGGCACGTGCCCGCAAATGGTCGGTCACTACCCTGCTCATCCTCAACCTGGCGTGTGCAGACGGTTGTCTGATGTGTCTGACTATTTTCTTTATAATTTACCTAGCCAAGCAGAGCTGGATATTTGGAGGTGTCATGTGCAAGATGCTTTTCTATTTGTGCAACACAAACATGTACGCTTCTATTATGATCATTACGCTGATGAGTCTACACAGACTGGTGGCAGTGGTGTGGCCCAAATACTTGAAAGCCTGTACTCGTAGACGGACGGTATTACTTGTGCTCGGGGGCCTGTGGATTGTCGTATTTCTTTTGGCTCTTCCTGCTTTGAGATTCAGAGAAACGATGGACTATAGGAACGGACGCACATTGTGTGAAACTAATCACGGCCGTCCACAGCATGTGATACTCCAGTACACACTTGAGACAGTGGTGGGCTTCCTGGTACCGTATGTGATCATAGTCAGCAGTTATGCGTGTATCCTTCGCCGCCTCAGACAGACCATGTTCAAGAGAAGGATACGAAGCGAGAACCTCATTCAAGCCATCATTGTGGCATTCTGCATTTTTTGGCTTCCTTATCATATTATTAATGTAGTGCAAGTGGTGGCAGCACTTATACAAGAGGAATCAACCAAAAAAAGATTGGATCATATCTGGCAGTCCAGTCGTGCGGTTACATCCGCTCTGGCTTTTATCAGTAGTTGTGCCAATCCTATCCTCTACACCTTTGCCGGACGCTCCTACATCAAAGCTGATGGCCTGGCATTCATGGCCAGACTCTTTGAGGGCACGGTCCTGGACTATGGTGCCCGAAAAAGACCAAAAGACCAGACTTCAAACCTCACAGAGTGCACAACCATATGAAAAAATCTTGGACAATTTTTTTTTTTGATAGTGTAGGGA

Function

NR:

description
leukotriene B4 receptor 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15687242_15691238.mRNA True 3003 mRNA 0.39 4 15685262 15691277

Neighbor

gene id symbol gene type direction distance location
CI01000004_15645965_15650241 NA coding upstream 34988 15645965 ~ 15650274 (+)
CI01000004_15631508_15632389 NA coding upstream 52859 15631430 ~ 15632403 (+)
CI01000004_15444403_15453408 SPPL2, SPPL2B coding upstream 231085 15444403 ~ 15454177 (+)
CI01000004_15400244_15414139 NA coding upstream 270886 15400244 ~ 15414376 (+)
CI01000004_15325044_15326740 NA coding upstream 358475 15325044 ~ 15326787 (+)
CI01000004_15694735_15698103 SDR39U1 coding downstream 3458 15694735 ~ 15698421 (+)
CI01000004_15711867_15722470 PARP2 coding downstream 20590 15711867 ~ 15722582 (+)
CI01000004_15787382_15803133 NA coding downstream 96105 15787382 ~ 15803144 (+)
CI01000004_15825817_15827475 TEP1 coding downstream 134540 15825817 ~ 15827603 (+)
CI01000004_15859240_15861471 APOL1 coding downstream 167963 15859240 ~ 15863449 (+)
G33882 NA non-coding upstream 62942 15620079 ~ 15622320 (+)
G33834 NA non-coding upstream 90887 15586066 ~ 15594375 (+)
G34142 NA non-coding upstream 128478 15556405 ~ 15556784 (+)
G34141 NA non-coding upstream 129049 15555855 ~ 15556213 (+)
G34101 NA non-coding upstream 202947 15481920 ~ 15482315 (+)
G34181 NA non-coding downstream 57372 15748649 ~ 15748926 (+)
G34183 NA non-coding downstream 60386 15751663 ~ 15752548 (+)
G34186 NA non-coding downstream 64758 15756035 ~ 15756391 (+)
G34188 NA non-coding downstream 76475 15767752 ~ 15767991 (+)
G34192 NA non-coding downstream 84982 15776259 ~ 15776513 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 593293 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1648362 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3029551 12646838 ~ 12652570 (+)
G31865 NA other upstream 3490115 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 4017603 11666900 ~ 11667659 (+)
G34220 NA other downstream 248080 15939357 ~ 15939950 (+)
G33815 NA other downstream 372138 16063415 ~ 16066464 (+)
G34400 NA other downstream 1286051 16971995 ~ 17025976 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location