cfap157 (cfap157,LOC107587652,LOC107672550,LOC107731015)


Basic Information

Item Value
gene id cfap157
gene name cfap157,LOC107587652,LOC107672550,LOC107731015
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 20035492 ~ 20040169 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238766.1
GCagagagtaatttttttttactttaaaaaattgtattaagcatttaaaatggcTAAACAACTAAACAAAGCACACTCTATAAGGCTAACACTGTTATAAACCTTATATGAAAATGTCACCCGCGCCAATAAAGCCTATACCTGGAGACTCTTTAAGAATATACAAACTTTAACATATGAATTGCTCATgactttgtaaataaaaatgggaCAGTTTAGGAAATTGCAACAGAGTAATGCAAACTCTGAGAAATATTTTAGGATGTGAACATGAACGATAACAACGAGTCAGTCTTTTTCATaatacatgcagtttttaaactGGTTCTTCATGTATCTTTATAATAACATCCGCTAACTGAAAACTATAAATCTTAAAGTTTacaataaagtcaaaataaagttaCAATATATATCTAAGCTCGAACTAACGCGTGTAAAGCAAACACGGACCTTATATTCAACATTAGAGAAGTGTGTGGAATTAGCAAATGACAGGATAAAGCTCAAGTTTCAGTCAAAAATGAAAGCGAAACGGTGGTTTAAACTCTTTGGATAATATTTTCCACTATTTTTTGGTTTGGAAAGAAGACGTGTGAAAAAGCACAACGCGCTCTCTCGCGCATGTCTGCGCGCGGCGCCTGAACTCAGACATCCATGGCAACAAGAAACAATTGCGTTTGAAAGTTTGTACTTGCGCCGTTTCGTTTAAAGTTGGCCATACGCAAAAGTTCAATGCCCCCTAAAAAGAATGGAAAAGGGACCGGAGATAAATCAGTTAAAAAGGAAAGTATGAATCCTGAGCAGAAAAAAGACGAAGATTTGACGGAGAGTGACAAAAACTTTTATCGGGCTCAAATACGCGATTTGGAGGAGCGACTGGAAAGGTACCAGCATAAATGCGATGAACTGGAGGTTCAGGAAAAGGATTTATACTCTAAGATCAATAATgtggagaaagagaagaaagacaTAGTCCTCTACCTAAAACGCACACTGGCTCAAAAAGAAGATGAACTGATTGATCTGACCGAGACGCtatcaaaacagcagcaagcTCAGGAGGCTGAGAGAGAGTCTTTTGAGTCACAGCTGAGCCTGCTTAGACACGAACTTCAGGAAAACAAGGAAAGGTTCACGTCTGAGAACATGGCACTTGCTGGTAAACTGGCATCTTTAGAGGAGTTTTCTATGCAGAGAGAGAAGCTTATGGCTGAACGCAGGTGTTTGGAAGAGCAGCTTCAAAAGCAAGAAGAAGAACATCAAGCGCAAATCTACAATCTGGAGAAAAAAGCTGTACTGGACAATGACAGgctaaagaaagaaatgctgCAACATGTTGCTGCTGTAGCAGCTGAATTTCGTCGGGTTTCAGATCAGAAGATGCCCGAGACAACAAAGAGAGCCATGCAAGAAAACCTGTCTGTGACAGCGCAACTTCAGCAGCTCTCAGACAAGACCAAGGAGCTGCTGAAGGAGAACAACGATCTGCGAGCGAGAGAAAAGCAACTCAAAATAGAGAACGCCATCAACGAACCGCTGCTACATGAGATAACCAAGAAAAGCGTTGCTAATCAAAAGGTAGTCCATCAGCTGGCAGAAAAGTGCGAGCAGATGCAGTCTGAAGTGGAGAAGTGTACCAAACTTAAAGCGGAGCACCGAGAGCTGCTTGACAGTCACTCTGCGATATGCACAGAGCTCGATGCTCTCAGAAAGAAACATGCAACAGTTACAGAAGTTCTAAACcaaacaaaagctgaaaccaaGACACAGAGAAAAGAGCTTGAGGAGGAAAGGCTGCAAGGACAACAGCTGAAAAAAGTTCTTGAGGAAGCAGCAGCAGCTTTAAAAGAGGCCCTGAGGGAGGTCCCTAAAGAGGAGGACTCACTTCTGAAGGTTACTGTCAGACGAAATCAGATGATGCAGAAACTGCTGGCTGTGTTGGATAGAGCTGCAGATTTAGGAAACGGTCTAGCGCTTGCTGAATTCACGCCGGAGGTGACTGGCAGGCATGATCTCAAAAAAGCCTGTGACATTAAAAGACCAAGCGAACGTCTGCGGAAATCTGCTTCACAGCTTTCTCACTTCAAAACCGGGGATCTGGGATTGGTCCCTCGCCAAACGCACACTACATCATCAAAGACAGGAAGCCTGTCTAAGAGTGCTTTTACCTATGCGCTTAAGAAACAATCAGGTGATAAATGACCGACCTTCTCATTGTCGTACTTGTGACAAGGCAGCTATGTTGATGTAGACCTGTGCCATTTCAATCTACATTGTGTTATGTCCATGTATTGTCACTAGGTGGCGTTGCCGTATCATTATGGACAGATacgtgaactgaaaaaaaagagaaaaaaaataaatgtttcccaTTCTTCGTTCACTAAGTTGTTGAATATCAAACgctaaaatgtttcattttatactAGAGTTATCATGGGGCAAGCATATGAGATTCTGCTTTTATACTACCTACTTAAatgttaatagtaataataattgtttgaaAGATTAGCTGGGTTAATACGGTCCTGTCACCCCTTGCTGGTAGGAGATGGTGTAAATATCCGAGCACGTTCAGGGGTGAACGATAAAAGACATCCCATTTCTCTTTTTGGGTCGCTGGGTGTTTATTTGAAGAAAAGCTTAGTAAAGGTCCGCAGTCCACGGTGCTGGGTAGTAACAGATAAtaagatttaaataattaagtacATGTAAATAGCttcaatcacattttaatatacgtGTAATTAGTCCACAGTTAAGTAcatgattatttattgttaacaCAATAGCGATAGATGATTCAGAATTCGAAAAGTTCCTTTCGAAAGTTGACCTACACTCGGAAATTCTTCCGGTTCTGGGAACTTTACACAAAGACCAGTCGTCAGTCAAGACTGCTTATTATAGTtggattatatattattaattattta

Function

symbol description
cfap157 Predicted to enable microtubule binding activity. Predicted to be involved in sperm axoneme assembly. Predicted to act upstream of or within cell differentiation and spermatogenesis. Predicted to be located in cilium; cytoplasm; and cytoskeleton. Predicted to be active in ciliary basal body. Orthologous to human CFAP157 (cilia and flagella associated protein 157).

NR:

description
cilia- and flagella-associated protein 157 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238766.1 True 2942 mRNA 0.40 9 20035492 20040169

Neighbor

gene id symbol gene type direction distance location
LOC122345820 LOC107720235,LOC107699702,LOC107587551,LOC107756287,LOC107567124 coding downstream 272384 19759722 ~ 19763108 (-)
mymk tmem8c,LOC107587553,LOC107699700,LOC107672546,LOC107720238,LOC107756286,LOC107567143 coding downstream 295215 19738248 ~ 19740277 (-)
slc2a8 slc2a8,LOC107720220,LOC107699761,LOC107756328,LOC107672579 coding downstream 308936 19721746 ~ 19726556 (-)
lcn15 LOC107567131,LOC107756329,LOC107672532 coding downstream 316156 19715931 ~ 19719336 (-)
jak2b jak2b,LOC107720250,LOC107699758,LOC107587486,LOC107756327,LOC107672564 coding downstream 334278 19676084 ~ 19701214 (-)
ptrh1 ptrh1 coding upstream 18106 20058275 ~ 20061197 (-)
pmpca pmpca,LOC107672556,LOC107699775,LOC107731046 coding upstream 31113 20071282 ~ 20075708 (-)
ptgs1 ptgs1,LOC107720239,LOC107699776,LOC107672577,LOC107587657,LOC107731054,LOC108255976 coding upstream 55300 20095469 ~ 20109238 (-)
zgc:101858 zgc:101858,LOC107740831,LOC107699707,LOC107552635,LOC103359842 coding upstream 87718 20127887 ~ 20130221 (-)
ppil3 ppil3 coding upstream 90290 20130459 ~ 20131947 (-)
G38019 NA non-coding downstream 78830 19956428 ~ 19956662 (-)
G37928 NA non-coding downstream 331807 19703420 ~ 19703685 (-)
G37926 NA non-coding downstream 333149 19702069 ~ 19702343 (-)
G37877 NA non-coding downstream 525210 19505921 ~ 19510282 (-)
G37801 NA non-coding downstream 748644 19286627 ~ 19286848 (-)
G38147 NA non-coding upstream 115612 20155781 ~ 20160794 (-)
G38156 NA non-coding upstream 236499 20276668 ~ 20279101 (-)
G38158 NA non-coding upstream 244454 20284623 ~ 20286229 (-)
G38161 NA non-coding upstream 257139 20297308 ~ 20677930 (-)
LOC122345854 NA non-coding upstream 618925 20659094 ~ 20659471 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other downstream 99916 19865019 ~ 19935576 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other downstream 851514 19175463 ~ 19183978 (-)
LOC122344738 acsl1b,LOC107571490,LOC107678619,LOC107758469,LOC107552354,LOC108274927 other downstream 2685112 17346469 ~ 17350380 (-)
LOC122345693 NA other downstream 3175561 16787809 ~ 16859931 (-)
G37277 ncam1a,LOC107681081,LOC107548183,LOC107756101 other downstream 3322325 16687260 ~ 16713167 (-)
G38058 NA other upstream 11490 20051659 ~ 20055798 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other upstream 85420 20125589 ~ 20127390 (-)
LOC122345844 ppil3 other upstream 354562 20394731 ~ 20396734 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other upstream 865874 20906043 ~ 20936097 (-)
G38359 NA other upstream 1324069 21364238 ~ 21369048 (-)

Expression


Co-expression Network