poli (poli)


Basic Information

Item Value
gene id poli
gene name poli
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 5388819 ~ 5393629 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238771.1
ttttattcaattgcgTTTTTATTCGCATTGACTACGAATATTTAACCGTATTTGAAACTGATTTCAAATCCGTCCTTAAATAACAATTGTGTTTTATGCAATTAATTCTAAACGTTTCCATATTTacctcatatttattttatgattactATTTATTGTTTCGTTTTGCTCCAGACCTATAGATGGCAGTAAAGTGTCACGAGCGGCGGACTTATGTTTTGATTACGGTGGCGGCACGTTTTGCTGTTGATAATCAaaagtagtattttattttgcttggaCGTGTCATATCCACGCATCTGTTTCTTGTATCAAAGATGGACACGGACGAAGAGGGAGACAATGACTGGCATCGCAGTTTAGAGTCAGACATGCTGGACACAGAAGGATGCTCCACTGAAAGGCTTGCATCCGTGTCCCAGAGAGTGATCCTGCACTTTGACCTGGACTGCTTCTATGCACAAGTCGAGATGATCCGAAACCCAGCACTCCGGGCCAAACCTCTTGGAATACAGCAGAAGTACATTATTGTGACGTGCAATTATGTGGCAAGAGAGCATGGCGTAAATAAACTGATGTCAGTGACTGATGCGGTGGAGAAGTGCCCTCAGCTGGTGCTAGTGAAAGGAGAAGATCTCACGCATTACAGAGAGATGTCCTACAAAGTCACGGAATTGCTGATGTCCCACTGTCCTCTAGTGGAGAGGCTGGGCTTTGACGAAAACTTCATGGACGTTACAGAAATGGTGGAGAGAAGACTTAAGCAAACCAGCATTTCAGATCTCTCCTTCATTGGacacatatacaaacatgaACCTCTGGCGGTCGATGAGGAGAACGCCCGGCTTGCTGTAGGATCCGTGATAGCATCTGAGATGAGGCAGGCCATCTTCAGGACGCTGGGACTGACCGGCTGTGCTGGCGTCGCTGACAACAAGCTCCTAGCCAAACTGGCGTCTGGAACGTTTAAGCCAAACCAGCAGACCACCCTCCTGCCGCGCAGCACCGCCGAGCTCATGAGCAGCCTCGCGGGACTCATCAAAGTGCCTGGGATCGGTTACAAGACGCGGGAGAAGCTAAAGGCTCTGGGTCTGGTCGGTGTGAGAGATCTACAGTTATGTCCTCTGCCTGACCTGGCGAAGGAGTTCGGCGAAGTGGCTGCTAAAAGGATTCAAAACCTGGCCTGGGGCATCGATGACTCTCCAGTCACGCCGGCCGGTCCTCCTCAGTCTCTCAGCGATGAGGACTCATTCAAGAAGATTTCCACTCTAgaggaagttcaaaagaaaaccGAAGAACTGCTTACCAACCTAACTGAGAGGATGCGCAAAGATGGCAGGCAGCCGCATACGTTCAGACTGACGATTCGCCGATATACCGTCACCAACCGCTGGTTCAACCGAGAGAGCCGGCAGTGTCCTATACCCAGCCACACCGGGCTCAAGATCGCATGCGGAAGCAGTGAGGCTGTGCCCCAGTTACTGTCTCTGTCGGAGAAGCTCTTCCATAAAATGGTGGACACGCGCGAGCCGTTCCATCTGACCCTGCTGAACGTGTGTTTTAGTAACCTGCAGGCTAAAAGCTCCAGCAGAGGCTCCATCGCCTCTTTCTTTCAGAAATCTCCTACAACGCAAACGACATGTCAGCGGCAGGTGGATCCTGATGACTTTGAGCCTGCTGCAAATTCCCAGGTCACTCGAGCGGATGTTTTACGTAAAGGtgataaaacatggaaacacacgTCAACCCAAGAATTACAAACACAGCCACCTTTAATCAACGCCACATCTCCCAGGAAGCCTGTTTCGGAGCCCTCACAAGTCACGAGCATCATCATAAGAGAGCCTGAGAAAACGGTGTGCTTCAAACCGCCCCGAGGCGTCGATCCAGAAGTATTCAAACTGCTCCCTGAACGCATTCAGATGGAGGTGATTTCCAGTTATCAGCATGAAGACTCCGCGCGGCTCAATTACGGAGCCGCTGACACGTCTTCGGCCGACGGCGACCCAGCAGGCCGTTCCACGCTGGCTTTTAAACAGCCGGCACCGAAGACTTCGTCATCCGCTCAGTCCGAGGAATCTGAGGAAAAAGTTCAAGAAAGTCAAATCCTACCGGCCGCTCAGGCACCTCGGTACGATGTCCCTGCAAACGTGGACGCTTATGTGTTCTCGCAGCTTCCTTCTGACGTGCAAAGAGAGTTACTGACTGAGTGGAGACAACAGAAGCCGGTCCTAAAAATCCCAACCAAACACTCGCATAAAACCTCCAATACCAAAGACAGGAAGAGTGCGGCTAAAGGCAGCCGGTGTAACATACTGAAATACTTCAAACCCAACTGAGGGTGGAAACGGTGcctgtttataaaaaaacagatgaaaaatgtaaaccatATCACTGTAAATCAGCCTTTCAGTAGTTCACAGAAAAATGTTGATTCTGCCATTCACTCACCTTAATGTCAAACCTgtgtatgacttactttcttgcATTAATCACAAAAAGGGAtgaaacaaactattttattcaATTCGGGTGAGTACATCACCACCAAATTTTAAGATATgtgttattttgttaataaaccatatatgttattaaa
>XM_043238772.1
ttttattcaattgcgTTTTTATTCGCATTGACTACGAATATTTAACCGTATTTGAAACTGATTTCAAATCCGTCCTTAAATAACAATTGTGTTTTATGCAATTAATTCTAAACGTTTCCATATTTacctcatatttattttatgattactATTTATTGTTTCGTTTTGCTCCAGACCTATAGATGGCAGTAAAGTGTCACGAGCGGCGGACTTATGTTTTGATTACGGTGGCGGCACGTTTTGCTGTTGATAATCAaaagtagtattttattttgcttggaCGTGTCATATCCACGCATCTGTTTCTTGTATCAAAGATGGACACGGACGAAGAGGGAGACAATGACTGGCATCGCAGTTTAGAGTCAGACATGCTGGACACAGGATGCTCCACTGAAAGGCTTGCATCCGTGTCCCAGAGAGTGATCCTGCACTTTGACCTGGACTGCTTCTATGCACAAGTCGAGATGATCCGAAACCCAGCACTCCGGGCCAAACCTCTTGGAATACAGCAGAAGTACATTATTGTGACGTGCAATTATGTGGCAAGAGAGCATGGCGTAAATAAACTGATGTCAGTGACTGATGCGGTGGAGAAGTGCCCTCAGCTGGTGCTAGTGAAAGGAGAAGATCTCACGCATTACAGAGAGATGTCCTACAAAGTCACGGAATTGCTGATGTCCCACTGTCCTCTAGTGGAGAGGCTGGGCTTTGACGAAAACTTCATGGACGTTACAGAAATGGTGGAGAGAAGACTTAAGCAAACCAGCATTTCAGATCTCTCCTTCATTGGacacatatacaaacatgaACCTCTGGCGGTCGATGAGGAGAACGCCCGGCTTGCTGTAGGATCCGTGATAGCATCTGAGATGAGGCAGGCCATCTTCAGGACGCTGGGACTGACCGGCTGTGCTGGCGTCGCTGACAACAAGCTCCTAGCCAAACTGGCGTCTGGAACGTTTAAGCCAAACCAGCAGACCACCCTCCTGCCGCGCAGCACCGCCGAGCTCATGAGCAGCCTCGCGGGACTCATCAAAGTGCCTGGGATCGGTTACAAGACGCGGGAGAAGCTAAAGGCTCTGGGTCTGGTCGGTGTGAGAGATCTACAGTTATGTCCTCTGCCTGACCTGGCGAAGGAGTTCGGCGAAGTGGCTGCTAAAAGGATTCAAAACCTGGCCTGGGGCATCGATGACTCTCCAGTCACGCCGGCCGGTCCTCCTCAGTCTCTCAGCGATGAGGACTCATTCAAGAAGATTTCCACTCTAgaggaagttcaaaagaaaaccGAAGAACTGCTTACCAACCTAACTGAGAGGATGCGCAAAGATGGCAGGCAGCCGCATACGTTCAGACTGACGATTCGCCGATATACCGTCACCAACCGCTGGTTCAACCGAGAGAGCCGGCAGTGTCCTATACCCAGCCACACCGGGCTCAAGATCGCATGCGGAAGCAGTGAGGCTGTGCCCCAGTTACTGTCTCTGTCGGAGAAGCTCTTCCATAAAATGGTGGACACGCGCGAGCCGTTCCATCTGACCCTGCTGAACGTGTGTTTTAGTAACCTGCAGGCTAAAAGCTCCAGCAGAGGCTCCATCGCCTCTTTCTTTCAGAAATCTCCTACAACGCAAACGACATGTCAGCGGCAGGTGGATCCTGATGACTTTGAGCCTGCTGCAAATTCCCAGGTCACTCGAGCGGATGTTTTACGTAAAGGtgataaaacatggaaacacacgTCAACCCAAGAATTACAAACACAGCCACCTTTAATCAACGCCACATCTCCCAGGAAGCCTGTTTCGGAGCCCTCACAAGTCACGAGCATCATCATAAGAGAGCCTGAGAAAACGGTGTGCTTCAAACCGCCCCGAGGCGTCGATCCAGAAGTATTCAAACTGCTCCCTGAACGCATTCAGATGGAGGTGATTTCCAGTTATCAGCATGAAGACTCCGCGCGGCTCAATTACGGAGCCGCTGACACGTCTTCGGCCGACGGCGACCCAGCAGGCCGTTCCACGCTGGCTTTTAAACAGCCGGCACCGAAGACTTCGTCATCCGCTCAGTCCGAGGAATCTGAGGAAAAAGTTCAAGAAAGTCAAATCCTACCGGCCGCTCAGGCACCTCGGTACGATGTCCCTGCAAACGTGGACGCTTATGTGTTCTCGCAGCTTCCTTCTGACGTGCAAAGAGAGTTACTGACTGAGTGGAGACAACAGAAGCCGGTCCTAAAAATCCCAACCAAACACTCGCATAAAACCTCCAATACCAAAGACAGGAAGAGTGCGGCTAAAGGCAGCCGGTGTAACATACTGAAATACTTCAAACCCAACTGAGGGTGGAAACGGTGcctgtttataaaaaaacagatgaaaaatgtaaaccatATCACTGTAAATCAGCCTTTCAGTAGTTCACAGAAAAATGTTGATTCTGCCATTCACTCACCTTAATGTCAAACCTgtgtatgacttactttcttgcATTAATCACAAAAAGGGAtgaaacaaactattttattcaATTCGGGTGAGTACATCACCACCAAATTTTAAGATATgtgttattttgttaataaaccatatatgttattaaa

Function

symbol description
poli Predicted to enable DNA-directed DNA polymerase activity. Predicted to be involved in translesion synthesis. Predicted to act upstream of or within DNA biosynthetic process and DNA repair. Orthologous to human POLI (DNA polymerase iota).

NR:

description
DNA polymerase iota

GO:

id name namespace
GO:0006281 DNA repair biological_process
GO:0003887 DNA-directed DNA polymerase activity molecular_function
GO:0003684 damaged DNA binding molecular_function

KEGG:

id description
K03510 POLI; DNA polymerase iota

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238771.1 True 2599 mRNA 0.48 10 5388819 5393629
XM_043238772.1 False 2596 mRNA 0.48 10 5388819 5393629

Neighbor

gene id symbol gene type direction distance location
LOC122345752 bri3bp,LOC107684981,LOC107597359,LOC107672602,LOC107595913 coding downstream 494 5383555 ~ 5388325 (-)
aacs aacs,LOC107672615,LOC108255473,LOC107684991 coding downstream 8550 5351446 ~ 5380269 (-)
si:dkey-215k6.1 si:dkey-215k6.1,LOC107684990,LOC107741256,LOC107672621,LOC107707847,LOC107548916,LOC107600130 coding downstream 55315 5169712 ~ 5333504 (-)
rnf215 rnf215,LOC107707831,LOC107656805,LOC107741259,LOC107672611,LOC107548928,LOC107600132 coding downstream 374878 5008086 ~ 5013941 (-)
zdhhc8b zdhhc8b,LOC107600124,LOC107672609,LOC107707819,LOC107741283,LOC107548914 coding downstream 387763 4949084 ~ 5001056 (-)
ankle2 ankle2,LOC107597302,LOC107684979,LOC107672626,LOC107741250,LOC107595914,LOC107752143 coding upstream 5265 5398894 ~ 5410494 (-)
golga3 LOC107684982,LOC107595916,LOC107741281,LOC107672616 coding upstream 19040 5412669 ~ 5429468 (-)
ranbp1 ranbp1,LOC107684983,LOC107752129,LOC107597301,LOC107672632,LOC107741249 coding upstream 36937 5430566 ~ 5435131 (-)
LOC122346225 NA coding upstream 37635 5431264 ~ 5431394 (-)
LOC122345133 LOC107752131,LOC107684984,LOC107595918,LOC107672624,LOC107741247 coding upstream 42348 5435977 ~ 5454756 (-)
LOC122345808 NA non-coding downstream 219570 5142578 ~ 5169249 (-)
G33334 NA non-coding downstream 312785 5075761 ~ 5076034 (-)
G33333 NA non-coding downstream 334916 5034111 ~ 5053903 (-)
G33332 NA non-coding downstream 354865 5032563 ~ 5033954 (-)
G33330 NA non-coding downstream 361004 5024945 ~ 5027815 (-)
LOC122344984 LOC107597340,LOC107752133,LOC107684988,LOC107672606 non-coding upstream 180535 5574164 ~ 5597629 (-)
LOC122344983 LOC107684988,LOC107597340,LOC107752133,LOC107741245,LOC107672606 non-coding upstream 194416 5588045 ~ 5595174 (-)
G33409 LOC107684993,LOC107597297,LOC106585658 non-coding upstream 207780 5601409 ~ 5602204 (-)
G33423 acacb,LOC107752147,LOC107654593 non-coding upstream 224636 5618265 ~ 5620705 (-)
G33434 NA non-coding upstream 260451 5654080 ~ 5654764 (-)
G33175 NA other downstream 765761 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 1195738 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 1490241 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 1636055 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 2428642 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 1430542 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 1529217 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 1988717 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 2313341 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 2324936 7718565 ~ 7721758 (-)

Expression


Co-expression Network