paip1 (paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649)


Basic Information

Item Value
gene id paip1
gene name paip1,LOC107725119,LOC107704219,LOC107658232,LOC107567649
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 278951 ~ 286298 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238854.1
TGGTGTTTCTGGAGAACGACTGAGGAAGTGATTAGTGCTTTTAACAGAGGGACAGATGCCAGAAACAGAAATAGTAAACATGAAAGTGAGAAGCAGGCTGTAGAGCGAAGCTGTCTGTGTAGCGTACAGCGGCCCACTGAGATCCGATCCGTGTGTTTATTCGCGTCTGACGACAGACAGTTGTGATCGGACGGGGGAGACCAGCGAGACGAAGATCatgtacaacaacaacaacagcggCAGCACACcgtcctcctcctcatcatccgAGGCTGGAGACATCAGAAGTTCAGTGTTTAACCCGGGCGAGCCGCTTAGACAGCCGCGCACGTCTCCTCCGGTGTCTGACAGCAGCGCAGAGAGCAGATCTCCCCTTCCTTCGGGGCACAATAGCAGCAGTGGCACAGATGCACTTGTGAAAAACTCCAAACTGTCTGCCGCTGCGCCTGAGTTTGTCCCGGGCTATTATGCATCATTCCAGGATGATGTATATTCCGATGGATCTGAAGGATACTATGCCGAACCCTCACTGGCTGATTTTGTTCAGGATTTTGTAAGCCATCTGAACTCATCTCCGGGGTCCTTCGAGTCAGAAATCGATTACATCACAGATACGCTGAACAGCTACGTCACTACGGAGGAGATTCTGCAGGAGCTGGTAGAGCTCATTTATGTACAGTCCACGTCTATCCCTAACTTCGCCTACACAGGGGCACGACTCTGTAACCATCTGTCTCATCACATCCGTCTCAGTCCAGTCAGCGGTAACTTCAGACAGCTTCTGCTGAAGAGGTGTCGAACCGAGTATGAGCAGAGGGAGCAGGCAGTAAGAGGAGAACCAGACACCCAGAAAAGGTTTCACTCTTATGTGCTGTTTCTGGGGGAGCTTTATCTTAACCTGGAGATAAAAAGCGGAAAGGACACACCTGGGCGAGCTATTGTTTTACTGGGAGCGCTAAGGGATCTTTTGAACGCTTTATTCTCTCACCCAGATGACCCCAACCTGATGTGTGCAGTCAAATTACTTAAGCTGAGTGGTTCCATTCTGGAAGACACATGGAAGGAGAGAGGCCAGTCAGACATGGATGAGGTAATCAAGAAGATTGAAGACGTTGTACTGGATGCCAAATGCAGCCGAGATGTCAAGCAGATGCTGTTGAAGCTGGTGGAGCTACGGTCCAGTAACTGGGGTCGCGTTCAGACAGCTGCTGTGTCCAGTGACGCTACGCCTGACAACGACCCCAACTACTTTATGAATGAACCAACCTTCTACACAGCAGATGGGACGCCTTTCACAGCAGCGGATCCTGAATACTCCGATAAATACCAGGAGATCCTAGACAGAGAAGACTACTTCCCTGATGCATATGAAGAGAATGGAAATGATTCCTTCTGCGGCGACGAAGATGAAATGGATCCGGAGATCGAGGAGGCGTTTGAGAGGTTTTGCATGGAGTCGGACGCAAGACGAAAGAAATGAGAGACTGTGAGATGGTCACGTTGACGTCACACCCGACCAGCTGGAATGTTTCAGAGCGGCAAAACCAAGAAAGTTTCGgttgattttctttttgatttctCAACAAGCACTTCTTGGCTACAATGTCACTGGATTTAATGGCTGGGATTACTGTTTAGTTGTAATGCAGCACAATTGGCGAGTCCGTCGGGCCATCGAATTTCCATCGGTTTGGCATTTGGGTTGTgaggtttattttaatgtgtgttctgattggtcaaaaaTCCCAAAAAAAGTTTGCAGTGAGATTTTAATATGAGCCGAAGAGTAGCATCATCAAATTTAAGTGTGGTTTGTTTGCAAACTAACTGCTCAGTATCCAACTAAGTGTAGGAGAAactgatttttgcattttactccTCGAGGCTTTGTCATGTAGAGTTAAAGAGCACAGGGATAAAGACGAAAACGTTTTAAGAatggtttttttcttcctttatcAGATTCTCCTCAAACCTTTTTAGATTTTATGCACATGTATGAAGAAAAAGGAGCCCTGACTTTATAGTCCGTTTGGTTTTTGGAATGCAGGAAGAACGTTGGCAAATGTTAAGTGTATCAATTTGGAGGAAAAGCTCGGCACAGGTTTATACAGATTCATCCGCCACTGTGATTTACAGAACCTTTCTCATCAACAACATCTCATGGAACCCATATAaaggaatgtttattttactatagttgtaaatattatttactgcATTGTTTGCCTGCAATAAAtctttataaaaacaca

Function

symbol description
paip1 Predicted to enable translation activator activity. Predicted to be involved in regulation of translational initiation. Orthologous to human PAIP1 (poly(A) binding protein interacting protein 1).

NR:

description
PREDICTED: polyadenylate-binding protein-interacting protein 1

GO:

id name namespace
GO:0003723 RNA binding molecular_function

KEGG:

id description
K14322 PAIP1; polyadenylate-binding protein-interacting protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238854.1 True 2255 mRNA 0.46 11 278951 286298

Neighbor

gene id symbol gene type direction distance location
c5h5orf34 LOC107750289,LOC107658216,LOC107567649 coding downstream 667 273168 ~ 278284 (-)
LOC122344789 LOC107704867,LOC107594577 coding downstream 6136 262368 ~ 272815 (-)
lifra LOC107594555,LOC107704172,LOC107658266,LOC107725078,LOC107750295,LOC107567645 coding downstream 56397 205102 ~ 222554 (-)
LOC122345224 spef2,LOC107704166,LOC107725157,LOC107573760 coding downstream 77342 185338 ~ 201609 (-)
LOC122346175 LOC107667871,LOC107707936,LOC107571030 coding downstream 197888 76028 ~ 81063 (-)
mybbp1a mybbp1a,LOC107658206,LOC107704885,LOC107594578,LOC107567654,LOC107750298 coding upstream 835 287133 ~ 299381 (-)
fgf10b fgf10,LOC107705049,LOC107725110,LOC107594591,LOC107658296,LOC107567653 coding upstream 15340 301638 ~ 313028 (-)
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding upstream 30543 316841 ~ 339731 (-)
LOC122345880 NA coding upstream 85373 371671 ~ 372818 (-)
si:ch211-12e13.10 NA coding upstream 112121 398419 ~ 399683 (-)
G32086 NA non-coding downstream 74415 162490 ~ 204536 (-)
G32102 NA non-coding downstream 253059 25514 ~ 25892 (-)
G32100 NA non-coding downstream 261436 16470 ~ 17515 (-)
G32099 NA non-coding downstream 263646 12703 ~ 15305 (-)
G32098 NA non-coding downstream 267082 11445 ~ 11869 (-)
G32150 NA non-coding upstream 64669 350967 ~ 352079 (-)
G32177 NA non-coding upstream 145332 431630 ~ 431890 (-)
G32186 NA non-coding upstream 169819 456117 ~ 482271 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding upstream 172182 458480 ~ 479881 (-)
G32191 NA non-coding upstream 178766 465064 ~ 470468 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 17280 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 242603 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 244234 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 255002 20139 ~ 23949 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other upstream 95754 382052 ~ 387878 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 270356 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 336216 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 1026306 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 1056308 1342606 ~ 1354414 (-)

Expression


Co-expression Network