si:dkey-125i10.3


Basic Information

Item Value
gene id si:dkey-125i10.3
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11330989 ~ 11336101 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238869.1
GCGAGCTATGTTTAGTTGTGTCTGTCTTTTGTTGGGGTGGAGGGAGGTGTAGGTGGTGTCTGTGTGTTCATATGTAGTGGTTGCAGTCTGGCTAGTTTTAAATCACTCTCACAGACTATACTGCACTGATTTCCACACGCAGACCTGACAGAAGAAGAGGATCTTGCCATGTCCAGTGCTGTTAACAGAGAAGCCGTATTCCAGGCGACAAAGGTTCGAAAGCATTTGAAACAAGATGGAAGCTGGATTAACAAATCTCAAGATGTTCACGACACAGAATCAGACGTAAAAGCATGTAAACCAATAAAGTTAAAACCTACAAATGTGTCATCACCTGAGAGCAGTTTGGCCTCTTCCTCCACCGTGCTATGTTCAGAGAGTGCTGCCGCCTCCTCCAGCTTGGACTCATCTACACCTCCTCAAAGCTCTAATGTCATGTCAGCCTTAAAGAAGTTTGAGCGACTGAACTCAACAGAAAACAAACCAGTCAAGAGTGGGTCCAGTGTGGCTAAAAGTGCACATCCTGTCCTCGAGGACTCAAGGGGAGCACATGTACAGAAAGCAGTGAAGACATCCATGGTCAAAGCCACAGAGCAACCACTGCAGACACCAGCAGATACTTCTGTAAAGGACGTATTGGAAAAACCAAACACCATACCTGCAGAGGAAGCATTGAAGACACATGCAGATGCTCCTAAAACAGACAAAGTGAAGAAACCTACAGAGGAGCCATTGAAGATGCATGCAGACACTCTTAAATTGGATGTAGTGGAGAAAcctatagttaaacctgtagaGGTGCCACTGAAGACACATGCAGATGCTCCTAAAACAGACAAAGTGGAGAAACCTACAGAGGAGCCATTGAAGATGCATGCGGACACTCCTAAATTGGATGTAGTGGAGAAAcctatagttaaacctgtagaGGTACCACTGAAGACACATGCAGACATTCCTAAAACAGACATAGTGGAGAAACCTGTAGAGGGACCACTGAAGATGCATGCAGATGCTCCTAAATCAAACATAGTGGAGAAACCTGTTGAAGAACCATTGAAGAGGCATGCTTACACTCCTAAAATGTATGTAGTGGATAAAGTTAAACCTGTAGAGGAACCTTTGAAGACACCTACATATGTTCCTGTAAAGAACATAGTGGAGAGCCCTGCAGAGGAATCAGTGAAAACACACTCAGAGACTCCTGTAGAGGGAACAAGGAAGACACCTGTAGATGGAGCTTCGACAGATCAGAACCCAGCAAAGCCTTCAGGTACACTGACagagaataaagaaaatgatacAGTTGAACACGTGTCAATGGCACATGCACCAGCTACAGAGTCATCAACTAGATCAACTACAGAACTGATCGAAGAACCCCGTGTGACAGCCCTGGAGGAGAACCACAGACTGAACAGTCAAGCTGAATTGAAAGTCAAAGGTAAAACCATGTGTTCCTTCTGCAAGCTGCCCATAGATGGAAATGTGAAAATCTCCATCAACATTCCTGCCATTTGCTGCCATCCGGATTGTTTTAagtgtaaTGGTTGCAGCAGTCCTCTGGGTGATCTCTCTTCATCTATGTACCACTGTGCTGGGAAAATCCTCTGCGAGAAATGCTTTGATCAAATCTTCCAGCTCTGATGACTCATCCTACAGCAGCTACTCCACTATAACTTACCACCATGACACCCAAGCACATCTACGAGCAAGTTTGCTGTGATTCAgcgctaattaaaaaaaatagtctttATCAGTAGAGGAACTGCTGTCGTAGGttcattttttcagaaaatggTCATGCTGTGTGCGCATGTCTTCCTATAAACTGACAAAATTCCCCATTGGGTTTAATAAagtatttctctctttctga

Function

GO:

id name namespace
GO:0044459 obsolete plasma membrane part cellular_component
GO:0042611 MHC protein complex cellular_component
GO:0042613 MHC class II protein complex cellular_component
GO:0098796 membrane protein complex cellular_component
GO:0098797 plasma membrane protein complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238869.1 True 1879 mRNA 0.44 8 11330989 11336101

Neighbor

gene id symbol gene type direction distance location
kat5a kat5a,LOC107597226,LOC107592273,LOC107680373,LOC107732605,LOC107687657 coding downstream 121548 11204478 ~ 11209441 (-)
gjb1a cx27.5,LOC107597344,LOC107687661,LOC107592389,LOC107680359,LOC107732608,LOC105893222 coding downstream 133785 11193469 ~ 11197204 (-)
gja2 cx39.9,LOC107597224,LOC107687660,LOC107747814,LOC107732602,LOC107680361,LOC107592390 coding downstream 138731 11189333 ~ 11192258 (-)
ercc6l ercc6l,LOC107687665,LOC107726361,LOC107592361 coding downstream 260220 11064771 ~ 11070769 (-)
ctdnep1a ctdnep1,LOC107672750,LOC107744461,LOC107599947,LOC107687669,LOC106577558 coding downstream 312147 11013727 ~ 11018842 (-)
agtr2 LOC107672423,LOC107597233,LOC107733228,LOC107680405,LOC107592269,LOC107732613 coding upstream 1765 11337866 ~ 11345096 (-)
tpcn1 tpcn1,LOC107732611,LOC107733226,LOC107672457,LOC107680394 coding upstream 12527 11348628 ~ 11361935 (-)
cfap73 LOC107680393,LOC107732615,LOC107592352,LOC107592387,LOC107578638 coding upstream 28977 11365078 ~ 11368614 (-)
tbx5b tbx5b,LOC107733219,LOC107592384,LOC107672879,LOC107748638,LOC107680353,LOC107597309 coding upstream 37701 11373802 ~ 11381783 (-)
prps1a prps1a,LOC107733231,LOC107672505,LOC103031347,LOC108443767,LOC105023901 coding upstream 46579 11382680 ~ 11388895 (-)
G35434 NA non-coding downstream 623 11304281 ~ 11330366 (-)
G35522 NA non-coding downstream 18159 11311549 ~ 11312830 (-)
G35450 NA non-coding downstream 80983 11249199 ~ 11250006 (-)
G35499 NA non-coding downstream 110098 11219968 ~ 11220891 (-)
G35501 fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227 non-coding downstream 117252 11212039 ~ 11213737 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding upstream 334856 11670957 ~ 11674817 (-)
G35594 NA non-coding upstream 356449 11692550 ~ 11694947 (-)
G35597 NA non-coding upstream 360090 11696191 ~ 11697674 (-)
G35599 NA non-coding upstream 361847 11697948 ~ 11699666 (-)
G35601 NA non-coding upstream 365132 11701233 ~ 11703708 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 361871 10960311 ~ 10969118 (-)
G35384 NA other downstream 404826 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 456925 10868364 ~ 10874064 (-)
G35122 NA other downstream 869280 10461208 ~ 10461709 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other downstream 995646 10324959 ~ 10335343 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other upstream 83854 11419955 ~ 11467122 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other upstream 247679 11583780 ~ 11652627 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 459555 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 829302 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 981702 12317803 ~ 12319685 (-)

Expression


Co-expression Network