si:ch211-283g2.2


Basic Information

Item Value
gene id si:ch211-283g2.2
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31661478 ~ 31667615 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238913.1
ATTAATAAGGGTTTGTGTTATTAATAAGGGTTTGTGTTATGGACCCTCAGTAGGAAGCCAGTGACTGCAAAGATTGTTCTCATGATGCTGTATCAGAAAACGGATAGCTCTGAGGAAATTATGAGCATGGACATGGAATATGAACAGAAGAAGGTTCCCAAAGATCGCTGCCGCAAACAAACTGGCATCCTTATGATTCTGGGAGTCTGCGTTATTGTTTTCACGACGATGACTTTTTTAATCTTTTTGCACCAACAGAGTAAGTTCTCGATGTTGGAGAGCTGGATGAACAGTCACAGTTCCAACCTGACTTCAGTCAAACCCGATCTTCAGAGTACAGAGCGTCAGGATGAAGTGAAGAGTTTGGTGGTCAGTCTGTCTTCTGCAGTATCAGCGCTGACATCCAAACTGAACGAAGCAGTTAGCAGCCAGGAccagaaacagactgaaagtAAACAATTGCTGGACGCTTTGAGCTCATCTGTTACTTCTCTGCAGGCTGACCAACAAAACAAGCAGCGTGGCGTCGAGTCGCTGTCGAGCTCACTGAAGGACCTGAAGAGTTCAGTTTCAGATCTCACCTCATCTGTCACATCTCTTTCCTCTCAGCTATCAGTCAGCAAGCAGAATGATTCGCAAACTAACGCGAAGAGTTTAATGAACTTGAGTTCTTCGGTGTCTGCGCTGACGGCACAGCTGAATGATGCAGTTAACAAGCAGGACCAGAAACAGAGTGAAACAGAAAGATCGCTGGACAGCTTGAAGTCGTCTATCGAGtctgatcaacaaaacaaacaacgtGTCTtcGAGTCTCTGAAGAGCTCAGTGAGTGACCTGAAGAGTTCAGTATCAGATCTCACTTCTTCCGTCGCAGCTCTTTCCTCAAAACAACAAACCTCTGAGGAAAGAGTCCTGAACGCTCTGAAGGAGCTGATAGCCAATATGAGTGGAAAAACAGCAGacacaggCGACTCTGCGGTCACCTGTAAATCCGGCTGGATCTTATACAAAAACAGCTGTTTCTTGTTCTCTAATAATAAACTCAACTGGTCCGAGGCACGAGATCACTGCAAAGAGCAGGATGCTTTACTCCTGAAAATACAAGACGACGACGACGACTGGGCCTTTCTGAACAAACACAGCATACCCACATCCTACTGGGTGGGTCTAACGGATCAGAGCACCGGCCAGTGGAGATGGGCGGACGAAACTCCCTACATCATGAACAAAGAACGCTGGAATGCTGGTCAGCCGGACGACTGGAAAGAACACAGTaaaggagaaggaggagaggaCTGTGGACAGATAACCTACACCGGAAAACTGAATGACAACCACTGCTCTgtcaaaatgaaatttatttgcAGAGTGCAGTTCTGAACTTCAAAACGCCTGTGATGGAGCGGGAAGATTAAATatcttttagtttagttttctgCAGAGTGCATGACACTGTGTAACACCTGCGTGTGTGATTATACTACCTTTTtgatagaaataaaaaatatgtagttatagtata

Function

GO:

id name namespace
GO:0030246 carbohydrate binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238913.1 True 1522 mRNA 0.45 13 31661478 31667615

Neighbor

gene id symbol gene type direction distance location
si:ch211-283g2.1 si:ch211-283g2.1,LOC107734371,LOC107591505,LOC107654320,LOC107562197,LOC107667012,LOC108437645 coding downstream 1816 31651505 ~ 31659662 (-)
LOC122344717 LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201 coding downstream 47648 31600225 ~ 31613830 (-)
LOC122344719 c1qbp,LOC107725147,LOC107664384,LOC107654317,LOC107734359 coding downstream 63168 31594477 ~ 31598310 (-)
LOC122344718 LOC107725156,LOC107654314,LOC107591470,LOC107734345,LOC100535945,LOC107562196 coding downstream 71081 31568780 ~ 31590397 (-)
srrm3 srrm3,LOC107591468,LOC107734356,LOC107562180,LOC107725131,LOC107654313 coding downstream 93794 31506479 ~ 31567684 (-)
LOC122345089 NA coding upstream 402 31668017 ~ 31671608 (-)
srrt srrt,LOC107665251,LOC107591506,LOC107725089,LOC107734366 coding upstream 6700 31674315 ~ 31683580 (-)
zgc:153704 zgc:153704,LOC107591480,LOC107562205,LOC107725160,LOC107665866,LOC107654290 coding upstream 65843 31733458 ~ 31735951 (-)
LOC122345662 ralgps1,LOC107666038,LOC107557582,LOC107725136,LOC107654291 coding upstream 92321 31759936 ~ 31857602 (-)
zbtb43 zbtb43,LOC107715540,LOC107668077,LOC107725105,LOC107654302 coding upstream 192281 31859896 ~ 31864890 (-)
G41034 NA non-coding downstream 12866 31646858 ~ 31648612 (-)
G40995 NA non-coding downstream 155381 31423085 ~ 31506097 (-)
LOC122345708 NA non-coding downstream 163384 31456500 ~ 31498094 (-)
G40996 NA non-coding downstream 166209 31435649 ~ 31495269 (-)
G40842 NA non-coding downstream 381047 31280177 ~ 31280431 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding upstream 16353 31683968 ~ 31684836 (-)
G41018 LOC107734365 non-coding upstream 24251 31691866 ~ 31695788 (-)
G41037 NA non-coding upstream 44736 31712351 ~ 31732259 (-)
G41047 NA non-coding upstream 56127 31723742 ~ 31904787 (-)
G41051 NA non-coding upstream 130094 31797709 ~ 31798268 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 311029 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 835120 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 868759 30789633 ~ 30792719 (-)
G40711 NA other downstream 928118 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 1048337 30590843 ~ 30613141 (-)
apooa apoo other upstream 34838 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 53655 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 446281 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 546416 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 615922 32283537 ~ 32314631 (-)

Expression


Co-expression Network