LOC122345089


Basic Information

Item Value
gene id LOC122345089
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31668017 ~ 31671608 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238915.1
GCTTATTTTACACTCATTTCATGGTCTGATAAAATGGAAATGGACGGCTCAGAAGAATACGTTCAAATGGAGATGGAGCGAGAACCAAAGAAATCATTTCAGAGAGgTCATCCCTGCGGCAGACAAACTGGCATACTTGTGTTTCTCGGAACAGCATGCACGATTATTTTCATGGTCATGACTTCTGTCATCTATTCACACCAAGAGCGAAAGTTCTCAGTGCTGCAGAGCTGGATGAACAGCCACACTTCTGATCTAACCTCAGTCAAATCTGATTTCCAGATCGCAGGTGGTGATCTAGAAAAGAAGATTGCTGAGCTGCAGACCTCAGTGGCCAGCTTGAGGTCATATTCGAACACATCTGGAGCAAGTAGGGaaatgcaaataaagaaGCTGTCCGCTATTGAGACTCTGATGACTGATCTTGGCTCTTCGCTGAGTTCACTCGCATCCAAACATGAAGAAAACCTACAAAAGCTGGAGCGCCAGCGGGACGTGTCACACACCGAAGTCAAGAGTTTGATGGACAGTTTGAGTTCTGCGGTGTCGGTTCTTAAGGATGAACTGGCGGAGGACAGCTTGGTGACATCTATTGTGGCTCTGCATTCTATtccacacacacagcagatcTTGATGGCCATGTCAAGATCACTGTCGGACATAAAGCATTCAGTAGCGGGACTGAGATCATCTATTCAAACTATTTCTTATAAACTATCATTTACAAatTTACTCACACACGGCTGTCCTGAACCTGACTGGATCCCGTTCAGAAACAGCTGTTACCTGTTCTCACAGGACGCGATGAACTGGACCAACGCAGAGGATTCCTGTGAAGAGAAGGGCGCATTGCTACTAAAAATCGAAGAAGGTTCCGAGAAGGAGTGGCAATTTGTTACCAATTTCGCCAAACCGCACGACTACTGGATTGGTCTCACTGACCAGAACACAGGGCAGTGGAGATGGACGGATGAAACTCCTTACATTATGAATAAAGAaCATTGGAGACCTGGGCAACCCCATGACTGGACCGAACACGGCCAGGGAGACGGAGGAGAGGACTGTGGGCAAATTTTACATGACGGGATGCTGAATGATGCCCACTGCTCTACTAAAATGAAGTATATatgtgaaatgcaaatgtgaaaGCGCAGCGTAAACGGGGCTTTGTTTCGACTGCGTTAAGTTTTTGTGTATTGCGTAAATTACAAATCACAATGTGTCGTTACTTAAATTAGTCTTTCTTTCCAAATTAAccaaattaattattaagttaaaaagattaGTTGTGTGTTAGCTGTTAATGAAGCTGTGTCACTCAACTAAATGcaatcaaacacagctggaccaaagggtctgaatacttatgaccatgtgacattttagtttttcttttttaataaatctgcaaaaat
>XM_043238916.1
GCTTATTTTACACTCATTTCATGGTCTGATAAAATGGAAATGGACGGCTCAGAAGAATACGTTCAAATGGAGATGGAGCGAGAACCAAAGAAATCATTTCAGAGAGgTCATCCCTGCGGCAGACAAACTGGCATACTTGTGTTTCTCGGAACAGCATGCACGATTATTTTCATGGTCATGACTTCTGTCATCTATTCACACCAAGAGCGAAAGTTCTCAGTGCTGCAGAGCTGGATGAACAGCCACACTTCTGATCTAACCTCAGTCAAATCTGATTTCCAGATCGCAGGTGGTGATCTAGAAAAGAAGATTGCTGAGCTGCAGACCTCAGTGGCCAGCTTGAGGTCATATTCGAACACATCTGGAGCAAAGCGCCAGCGGGACGTGTCACACACCGAAGTCAAGAGTTTGATGGACAGTTTGAGTTCTGCGGTGTCGGTTCTTAAGGATGAACTGGCGGAGGACAGCTTGGTGACATCTATTGTGGCTCTGCATTCTATtccacacacacagcagatcTTGATGGCCATGTCAAGATCACTGTCGGACATAAAGCATTCAGTAGCGGGACTGAGATCATCTATTCAAACTATTTCTTATAAACTATCATTTACAAatTTACTCACACACGGCTGTCCTGAACCTGACTGGATCCCGTTCAGAAACAGCTGTTACCTGTTCTCACAGGACGCGATGAACTGGACCAACGCAGAGGATTCCTGTGAAGAGAAGGGCGCATTGCTACTAAAAATCGAAGAAGGTTCCGAGAAGGAGTGGCAATTTGTTACCAATTTCGCCAAACCGCACGACTACTGGATTGGTCTCACTGACCAGAACACAGGGCAGTGGAGATGGACGGATGAAACTCCTTACATTATGAATAAAGAaCATTGGAGACCTGGGCAACCCCATGACTGGACCGAACACGGCCAGGGAGACGGAGGAGAGGACTGTGGGCAAATTTTACATGACGGGATGCTGAATGATGCCCACTGCTCTACTAAAATGAAGTATATatgtgaaatgcaaatgtgaaaGCGCAGCGTAAACGGGGCTTTGTTTCGACTGCGTTAAGTTTTTGTGTATTGCGTAAATTACAAATCACAATGTGTCGTTACTTAAATTAGTCTTTCTTTCCAAATTAAccaaattaattattaagttaaaaagattaGTTGTGTGTTAGCTGTTAATGAAGCTGTGTCACTCAACTAAATGcaatcaaacacagctggaccaaagggtctgaatacttatgaccatgtgacattttagtttttcttttttaataaatctgcaaaaat
>XM_043238917.1
GCGACTGCTTATTTTACACTCATTTCATGGTCTGATAAAATGGAAATGGACGGCTCAGAAGAATACGTTCAAATGGAGATGGAGCGAGAACCAAAGAAATCATTTCAGAGAGgTCATCCCTGCGGCAGACAAACTGGCATACTTGTGTTTCTCGGAACAGCATGCACGATTATTTTCATGGTCATGACTTCTGTCATCTAAAGCTGGGAAATGTTTGCGCGCTTGTCcttctgtttattttgcttcaaAGATTCACACCAAGAGCGAAAGTTCTCAGTGCTGCAGAGCTGGATGAACAGCCACACTTCTGATCTAACCTCAGTCAAATCTGATTTCCAGATCGCAGGTGGTGATCTAGAAAAGAAGATTGCTGAGCTGCAGACCTCAGTGGCCAGCTTGAGGTCATATTCGAACACATCTGGAGCAAGTAGGGaaatgcaaataaagaaGCTGTCCGCTATTGAGACTCTGATGACTGATCTTGGCTCTTCGCTGAGTTCACTCGCATCCAAACATGAAGAAAACCTACAAAAGCTGGAGCGCCAGCGGGACGTGTCACACACCGAAGTCAAGAGTTTGATGGACAGTTTGAGTTCTGCGGTGTCGGTTCTTAAGGATGAACTGGCGGAGGACAGCTTGGTGACATCTATTGTGGCTCTGCATTCTATtccacacacacagcagatcTTGATGGCCATGTCAAGATCACTGTCGGACATAAAGCATTCAGTAGCGGGACTGAGATCATCTATTCAAACTATTTCTTATAAACTATCATTTACAAatTTACTCACACACGGCTGTCCTGAACCTGACTGGATCCCGTTCAGAAACAGCTGTTACCTGTTCTCACAGGACGCGATGAACTGGACCAACGCAGAGGATTCCTGTGAAGAGAAGGGCGCATTGCTACTAAAAATCGAAGAAGGTTCCGAGAAGGAGTGGCAATTTGTTACCAATTTCGCCAAACCGCACGACTACTGGATTGGTCTCACTGACCAGAACACAGGGCAGTGGAGATGGACGGATGAAACTCCTTACATTATGAATAAAGAaCATTGGAGACCTGGGCAACCCCATGACTGGACCGAACACGGCCAGGGAGACGGAGGAGAGGACTGTGGGCAAATTTTACATGACGGGATGCTGAATGATGCCCACTGCTCTACTAAAATGAAGTATATatgtgaaatgcaaatgtgaaaGCGCAGCGTAAACGGGGCTTTGTTTCGACTGCGTTAAGTTTTTGTGTATTGCGTAAATTACAAATCACAATGTGTCGTTACTTAAATTAGTCTTTCTTTCCAAATTAAccaaattaattattaagttaaaaagattaGTTGTGTGTTAGCTGTTAATGAAGCTGTGTCACTCAACTAAATGcaatcaaacacagctggaccaaagggtctgaatacttatgaccatgtgacattttagtttttcttttttaataaatctgcaaaaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238915.1 False 1415 mRNA 0.43 10 31668017 31671602
XM_043238916.1 False 1304 mRNA 0.43 9 31668017 31671602
XM_043238917.1 True 1472 mRNA 0.43 10 31668017 31671608

Neighbor

gene id symbol gene type direction distance location
si:ch211-283g2.2 NA coding downstream 402 31661478 ~ 31667615 (-)
si:ch211-283g2.1 si:ch211-283g2.1,LOC107734371,LOC107591505,LOC107654320,LOC107562197,LOC107667012,LOC108437645 coding downstream 8355 31651505 ~ 31659662 (-)
LOC122344717 LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201 coding downstream 54187 31600225 ~ 31613830 (-)
LOC122344719 c1qbp,LOC107725147,LOC107664384,LOC107654317,LOC107734359 coding downstream 69707 31594477 ~ 31598310 (-)
LOC122344718 LOC107725156,LOC107654314,LOC107591470,LOC107734345,LOC100535945,LOC107562196 coding downstream 77620 31568780 ~ 31590397 (-)
srrt srrt,LOC107665251,LOC107591506,LOC107725089,LOC107734366 coding upstream 2707 31674315 ~ 31683580 (-)
zgc:153704 zgc:153704,LOC107591480,LOC107562205,LOC107725160,LOC107665866,LOC107654290 coding upstream 61850 31733458 ~ 31735951 (-)
LOC122345662 ralgps1,LOC107666038,LOC107557582,LOC107725136,LOC107654291 coding upstream 88328 31759936 ~ 31857602 (-)
zbtb43 zbtb43,LOC107715540,LOC107668077,LOC107725105,LOC107654302 coding upstream 188288 31859896 ~ 31864890 (-)
lmx1ba lmx1b,lmx1ba,LOC107591520,LOC107668223,LOC107725103,LOC107654328,LOC107557569,LOC105902565 coding upstream 224195 31895803 ~ 31934473 (-)
G41034 NA non-coding downstream 19405 31646858 ~ 31648612 (-)
G40995 NA non-coding downstream 161920 31423085 ~ 31506097 (-)
LOC122345708 NA non-coding downstream 169923 31456500 ~ 31498094 (-)
G40996 NA non-coding downstream 172748 31435649 ~ 31495269 (-)
G40842 NA non-coding downstream 387586 31280177 ~ 31280431 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding upstream 12360 31683968 ~ 31684836 (-)
G41018 LOC107734365 non-coding upstream 20258 31691866 ~ 31695788 (-)
G41037 NA non-coding upstream 40743 31712351 ~ 31732259 (-)
G41047 NA non-coding upstream 52134 31723742 ~ 31904787 (-)
G41051 NA non-coding upstream 126101 31797709 ~ 31798268 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 317568 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 841659 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 875298 30789633 ~ 30792719 (-)
G40711 NA other downstream 934657 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 1054876 30590843 ~ 30613141 (-)
apooa apoo other upstream 30845 31702453 ~ 31711737 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 49662 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 442288 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 542423 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 611929 32283537 ~ 32314631 (-)

Expression


Co-expression Network