npas2 (npas2,LOC107672582,LOC107597247,LOC107741183,LOC107565421,LOC107680380)


Basic Information

Item Value
gene id npas2
gene name npas2,LOC107672582,LOC107597247,LOC107741183,LOC107565421,LOC107680380
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11527062 ~ 11573963 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238929.1
GCCCTGGAAGTCACTCATTGCCCACAGAAACGGTGCCGGTTATGTAACCCGATTGCATGTGTAAGGCAGGGAAGGCAAAAAACGCTCTCGGTGTGTCTCGTCGCTGGAGATTCCTAGCAACTTTTCTGTTGAAGTCGGGTTCTCGTTGCTGCCTGTCTGATTAGGTCCTTCTGTTTGTAACTTcatggagagagaaaacactTTTGCAAGTGTACATTAACAATTGTCGTCTGGATGTCAGTAGTCAAGATAAACACTATCTTGAGGTTTAAGCATTTAAGGACTGGCTAGCCATAGGAACATAACTACAATATCTATTGGCTGTCAGTCAATACCGGTGAATAGCCTTCAGAGATTTGTGAGTGGTGGCTAACCACAAGCATTAGGCAGTTAGCTTGTAGCGTCCATTAGAATTTCTGTGGGTGTTTCGAGCGTGGAAGACACGAATGGGACACTCTAGCCTTTCCAGACGGCCTGAATGGGAGAAGGAGTGAGCATGGACAACCTTTTGGAGTTTGGAGGCCTTTGTCCATCCACCCGGAGGGAATGGGAcacagggagctgtGTGGATGATTTAATGGATGAAGATGAGAAAGACAGAGCAAAAAGGGCGTCCCGTAataaatcagagaagaagagaagagaccAGTTCAATGTTCTCATTAAAGAGCTGTGTACGATGCTGCAGGGTCAAGGTCACCCCCGCAAGATGGACAAATCCACAATCCTGCAGAGAACCATTGACTTCCTGCAGAAACAGAAAGAAATCACAGCGCAAACAGAATCCTGTGAGGTCCGGCAGGACTGGAAGCCTTCTTTCCTCAGCAACGAGGAATTCACCCAGTTAATGCTGGAGGCATTGGATGGTTTCCTGATAGCGCTTACCACAGATGGGAACATCATATATGTATCTGACAGCGTCTCATCTCTTATTGGTCATCTGCCGTCAGATATGGTGGACCAGAACATTTTGAACTTCCTGCCAGAACGAGAACATGGAGAGGTGTATAAACTTCTGTCATCACACATGCTCCTGACAGAGCCTTCTGCTGTGGACCTACTCAACAGCAatgaGACACACGTTGAGTTCTGCTGTCATTTAGCAAGGGGGAACATTGACCCAAAAGAACCGCCCACTTACGAATATGTCAAATTTGTTGGAGATTTCAAGTTTCATAATAACGTGCCTCTGTCCTCATGTAACGGTTATGAGCTGGCATTTCCGCGCACACTGCAGTCTTCACTAGAGGAGCAGATCTGTCTCGTAGCCACAGTGAGACTTGTGACCCCTCAGTTCCTAAAGgaTCTGTGCAACGTGGAGGATGTGTGTGATGAATTCACATCAAGACACAGTCTGGAATGGAAATTTCTCTTCTTAGATCATAGggCCTCGCCTATCATTGGGTACCTGCCGTTTGAGGTTTTAGGGACCTCGGGTTACGATTATTACCATGTGGACGACCTGGAGTTGATTGCTCAGTGTCACAAACAATtgaTGCAGTGTGGGAAAGGAAAATCCTGTTACTATCGGTTTCTGACTAAAGGGCAGCAGTGGATCTGGCTACAAACACACTATTACATCACATACCACCAGTGGAACTCCAAACCAGAGTTTATCGTCTGCACACACAGTGTGGtcagCTATGCTGAAGTCCGAGcagaaagaaggagagagatTGGATTGGAGGAAAGCTCATCTGATATGGCAACATCCTCAATTAAGgGGCAGGAGGTGTTTTTGGACATGTGTCCTCCTTTGGAAACTACACGAGAAAGAATCAGCAGCGCTCGATCAGTGTCGTCACAGAGTTCTAGGAAATCTTCACACACAGCGCTGTCTGACTCGGCGTCGAACTCATCGGTAAGGTACACAGAGGCATGCACGTCGTCACGACAATCCGCTTCTATTGGTCCTGAGAAGAGTTCCAACAGAATGCCACATAGTGGATCAAAGAGCCTGATTCAGAGGCAGAGCTCCTCTGAGCCCACATCACTCTCCCCCTCCTGCAGTCAGCATTCCACTATGACACAGTCTCTGTACGGATTCCAGCAGCCTCAGTTAGGCGTCATGCATCAGCTGAAAGAACAGCTAGAAGAGCGGACGCGCATCCTACAGGCCGACatcaaaacacaacaacaagAGCTGCACGACATTAAAGAGAAACTACAACTTGCTAATCTACAGATGTTACTTCAGCAGCCGATACAGGGAGAATTTGCCGGTTCTGGTCCTCAGCAGCAGGGTCCAGGCAGGCCGTCCCAACACAGCACCCAGCCCAAACCTCAACACTGTGTTTCACATTCATCGCACACACTACTCAGAGAACAGCCCAGTAGCTCATCTGCTCAGGGCCAGCAGAGACTGGTTCAGACTGGACACATGCAGGCCGTCAGCGTTCCAATGCAGACACACACCAGTCTCACCACACCCTTCTATAGCAACCCAATGATGTTCTCACCTAACCACGGACACCGAACCCAACATGACACACACTgccaaagacacacacacactgactacAGCCAGGACGGACAGCTACGGATGCTACTAAACCAACCAATGCAGACGCTTGTACCAGACAGCAATGGGGGGGCCCAGTCTTCCCAGTGCAGCTCAACTATTCAACAAAccaaATATCCTCTGGACCAGCAGATGATGGCTCCTTCCTTCCCTGTGCAGCAGGTGAACTGTAACGCTGTGCTTGTCCCTTCCCCCGTCTTCACCTCACCAATCATGATCCCACATAACAGTTTCATCACCCATCAGGCCACGCCCGCCTATACGCCTCACCCATCAGCCGCCCCACAAAGTTTACCACTACAACAAACTCAGCAGTTCTTTCAGATGCAGCCTCAGGGTCTGATTCACAGTGCTCCCACTCAGGCCTTATTCCACACCCCTAGCGTTCCGCAGCAAAGCACTGTGGGATACGTACAGccacaacagcagcagcaacagcatcATCACTCACAGTCCGGCAACCTGTCGGACTACAGAAACATGCTCCCACGGTAGCCCCGCCACCTGGGGGAAAAAGCCAAGAGATTGCTGGAAAAGCGCATTGAGCATTTAGCTCTGAAAGGCATGATGGGAAGGGACTCTCTCGGCTCAGGGGAAGGCTCGCTCCCGAGCCAAACCAAAATCGAGAAAGCCAAAGTCCCTCAAAGTTCCCATGACAGCAAATGATGGTGATAACGCCACAAGGCCCAAGGACTGTGCCTGGCCTGGACTGCACGCAGGGGATGCTGGGATACGTAGGAGGAGCCCGCAGGCGTGTGACCTGTCATGGAGACAGAGGTCACAGAGCAGTCAAGCAGGCGCTTTGATCGACACGTAAAGGACAGAAAGCCGTAGAGGGTTTTTGGTACTGTAATGTTACAGTTATCTAGActtttcaaaacacaaacatacaaaaataagacaaaatcaACAAATCAAGTAATGCCTTGACAGAGCGTAAACTCTTCTGCGTGTGTTCTGTCCTCAACCGCTACTAAAATAGTAACTAAAAGAGAAACCGCCCCaccaagaagaagaaaaatacatgAACTGATCATATTTCATGTGCGTGTGCTGATGAGAGGAGCTGGGCATAATTCAGCGAAGAcccaaatatatttgaaaaacatttggcTTCCTGTTATCATGTGCAGAGCAGGTTCGGCCCCCTCCTGTAGTTATGTTAACACTAACGTAAAGAAACTTGAATCACGCtgtatatttctaatatttaagaGCAAGTTCGCATTAGGGCAAACCTTCCTATTGCTCAGCTCAACTCAATCCCtgttactctttattttttgaTCCACTGTACTGTACCTAGGGTTTCTCCACATGTTGAGTTCCGAAATATCATATTTcagtactttttatttcattttacggTTATAAACCTAGCTCGTCAGGAGAAGCATGTTGGTTTCACTGATCAAACAGTTCTTTGAGTTTTCAGATGTGCATGTGGTCTGCCTGTTCATACAGAAATCTAAATTTGATTTGATGTCAATGTAAGCAGGACAGATGTGCTTCAATATTTAGTTTCAGTGTTACACAGGGATGAAGCTCTGTTTAATTTATGCTTCGTAGTAGAGGGACTGTGTTGATTGTTTTATGGTGGTGGGGCGCGAGTGGTGCAGCAGTTAAACTGCGAAAATgaagatgtaaaataaaacggTAATGCATGTGGAATGATTGAAGACAATCACAACGTCATGGCTGCAGAAATGGAAATGTTCTCATCTGCCTGTCACTTTGGGCAAAATGTTTGGCAAATACAACtcaaatattagtaaaaaaaaaaataccccattattattatttttttttttgtattattatttttgaggaATTGTTGTAGACATGGAAGTGTTTAGATGTTATGAAAAATCACAGACAAAAATCTGACAATCGGGGAAACTTCAAGCTTGCACTTTCCTCCATCCTGTCACGCATAGCACATTTAAAGGCTGGTGCtggttatattattttttttaaaactaagaCGATTCTGTTCAAGACAGTTTAGATCATGTGCCCTTCTGTATGTCGTGCAATGCAAATCGAAAAACAAGAATGTGTGTAATTTATACTTATCGAAGAGATTTCTGTTTTTCGTCAGGTATGTTTTCTTGTATTAGCAAGAAATGCTTCGTATTAGTAAAAGCCAACGTGCTGTTTGAATGAAAACCGAAAGTATTTTTGTACTAAAATCTCCTCGACATTCCTTCAGTCATGTGTAGAAAGCGTGAAACTCCCCGACTCTCTCAGGTGTGACATCTCCACGCAGGTGTCTAGCTTGTTAGTACGCTGTTGCTGGTCTAAGCCGGTTACTAGGTGGTCATTAGCTGCTCCAACCATCTGGGACCAGCAACAAACCAGACGGAGGAGCTATAAAACACCAACTTCAAAACGAGTAGGACAAATAAATCCAAAGGTTCTGACTTACGCCAGTTGCCACTGTGATGGCCATTTAGTGTGTGCATCGCCCCCTGAACAAAACGAGCTGTTTCATCCTTCATTTATTGCCCATTTGTGGtgttttcatgaaatattttgcCAGCTAGGCTCGAACATTTCGtctcaaatgtttcttgagttaAAGGTTTGATTGTTTTgcagatgtgtttgtgttcattgGGTTGTGAGTGGTAGATGGAAACTGTACCGACTCTCTCATCTTTGTTCTCTTTCTCTATGAAACTATGCTCTTGTGGAGACTGCACTTTATTCTTTATCCCTTCTTTAAGTCTTTTGCtttgtgctctctctctctctctctctctctctctctctcttttctctctggcCTAAATTTCACCCCAAAAGTGTCTGTTCTGATGAGGTTTTAGGCCTCATGGATTCGTGAGcgtgtgttttatgtgtgtgttgtgagtgTATGTGTTATCTGTGTTACCTGAACTGGTGACATCGtcaatgcatttatattctaCCAGGTGAGGGGAAGAGACAGAAAGTGACACCTGGTTTAAACAGCCATCTCTGCTGATACTCTGCAGAAAATACACGGAAGATATTGTAATATAAGATATACAGAAAATGTCTAGAAAAATatagttgtttattttataagatGTCAAATAGattgaaataaatttatatGCAGTGTATGATTTGAAAGTAAAAACAGAGGTATTTTGTAACAGATTAATTATTGAAGTGTCTTACTTTGGGGGGACGTAAAGCTTTCTGTTTGTCGGTTCAGCGAGTTGATGTTGCACAGTCAATGTATGGCTtgtttttcccccttttattCTTCTGTGTACATATACCATCACAACAAGCTTTAAcatattgttaatattgttttaaaagaaattaataataaaaaaaaagtttacattctGAAA
>XM_043238930.1
ATGTTCAAGTGCGTTCCTGACATGTGTGTCTTTTCTCTGGCGCGTGTGTGTGAGGCTGCGGGCGGTTAGTGCTGTCGTTGGTTGAGTATTGAGCTCCAGTCTGACCTACTTTCGTACTTCGCATCAGCTCAGCGCTGTTTACAGGCGCTCGTCGGCAGAGGATGTGGACCCGGTAACGAAAACACGTCGCCGAAACGCCGAGTCGCGTGCTCTCCCGTGCCGCTTTTATCCTGGGGATCTTGACTTAGCGTGGTTAGTGCGTATTTTGTCCCGTGTCCCACTTCAGAGTGGCTCTTTCGTGGCTTGTTTGAGGTAAAGGCGAGCTCACTCGTGGATTCGGCGTAAGAGACGCGGACGAGGGCAAAAGTGAAGCGTGAACCTGTGACGTTAGTCCTTAACGCACGGTCCTTCTGTTTGTAACTTcatggagagagaaaacactTTTGCAAGTGTACATTAACAATTGTCGTCTGGATGTCAGTAGTCAAGATAAACACTATCTTGAGGTTTAAGCATTTAAGGACTGGCTAGCCATAGGAACATAACTACAATATCTATTGGCTGTCAGTCAATACCGGTGAATAGCCTTCAGAGATTTGTGAGTGGTGGCTAACCACAAGCATTAGGCAGTTAGCTTGTAGCGTCCATTAGAATTTCTGTGGGTGTTTCGAGCGTGGAAGACACGAATGGGACACTCTAGCCTTTCCAGACGGCCTGAATGGGAGAAGGAGTGAGCATGGACAACCTTTTGGAGTTTGGAGGCCTTTGTCCATCCACCCGGAGGGAATGGGAcacagggagctgtGTGGATGATTTAATGGATGAAGATGAGAAAGACAGAGCAAAAAGGGCGTCCCGTAataaatcagagaagaagagaagagaccAGTTCAATGTTCTCATTAAAGAGCTGTGTACGATGCTGCAGGGTCAAGGTCACCCCCGCAAGATGGACAAATCCACAATCCTGCAGAGAACCATTGACTTCCTGCAGAAACAGAAAGAAATCACAGCGCAAACAGAATCCTGTGAGGTCCGGCAGGACTGGAAGCCTTCTTTCCTCAGCAACGAGGAATTCACCCAGTTAATGCTGGAGGCATTGGATGGTTTCCTGATAGCGCTTACCACAGATGGGAACATCATATATGTATCTGACAGCGTCTCATCTCTTATTGGTCATCTGCCGTCAGATATGGTGGACCAGAACATTTTGAACTTCCTGCCAGAACGAGAACATGGAGAGGTGTATAAACTTCTGTCATCACACATGCTCCTGACAGAGCCTTCTGCTGTGGACCTACTCAACAGCAatgaGACACACGTTGAGTTCTGCTGTCATTTAGCAAGGGGGAACATTGACCCAAAAGAACCGCCCACTTACGAATATGTCAAATTTGTTGGAGATTTCAAGTTTCATAATAACGTGCCTCTGTCCTCATGTAACGGTTATGAGCTGGCATTTCCGCGCACACTGCAGTCTTCACTAGAGGAGCAGATCTGTCTCGTAGCCACAGTGAGACTTGTGACCCCTCAGTTCCTAAAGgaTCTGTGCAACGTGGAGGATGTGTGTGATGAATTCACATCAAGACACAGTCTGGAATGGAAATTTCTCTTCTTAGATCATAGggCCTCGCCTATCATTGGGTACCTGCCGTTTGAGGTTTTAGGGACCTCGGGTTACGATTATTACCATGTGGACGACCTGGAGTTGATTGCTCAGTGTCACAAACAATtgaTGCAGTGTGGGAAAGGAAAATCCTGTTACTATCGGTTTCTGACTAAAGGGCAGCAGTGGATCTGGCTACAAACACACTATTACATCACATACCACCAGTGGAACTCCAAACCAGAGTTTATCGTCTGCACACACAGTGTGGtcagCTATGCTGAAGTCCGAGcagaaagaaggagagagatTGGATTGGAGGAAAGCTCATCTGATATGGCAACATCCTCAATTAAGgGGCAGGAGGTGTTTTTGGACATGTGTCCTCCTTTGGAAACTACACGAGAAAGAATCAGCAGCGCTCGATCAGTGTCGTCACAGAGTTCTAGGAAATCTTCACACACAGCGCTGTCTGACTCGGCGTCGAACTCATCGGTAAGGTACACAGAGGCATGCACGTCGTCACGACAATCCGCTTCTATTGGTCCTGAGAAGAGTTCCAACAGAATGCCACATAGTGGATCAAAGAGCCTGATTCAGAGGCAGAGCTCCTCTGAGCCCACATCACTCTCCCCCTCCTGCAGTCAGCATTCCACTATGACACAGTCTCTGTACGGATTCCAGCAGCCTCAGTTAGGCGTCATGCATCAGCTGAAAGAACAGCTAGAAGAGCGGACGCGCATCCTACAGGCCGACatcaaaacacaacaacaagAGCTGCACGACATTAAAGAGAAACTACAACTTGCTAATCTACAGATGTTACTTCAGCAGCCGATACAGGGAGAATTTGCCGGTTCTGGTCCTCAGCAGCAGGGTCCAGGCAGGCCGTCCCAACACAGCACCCAGCCCAAACCTCAACACTGTGTTTCACATTCATCGCACACACTACTCAGAGAACAGCCCAGTAGCTCATCTGCTCAGGGCCAGCAGAGACTGGTTCAGACTGGACACATGCAGGCCGTCAGCGTTCCAATGCAGACACACACCAGTCTCACCACACCCTTCTATAGCAACCCAATGATGTTCTCACCTAACCACGGACACCGAACCCAACATGACACACACTgccaaagacacacacacactgactacAGCCAGGACGGACAGCTACGGATGCTACTAAACCAACCAATGCAGACGCTTGTACCAGACAGCAATGGGGGGGCCCAGTCTTCCCAGTGCAGCTCAACTATTCAACAAAccaaATATCCTCTGGACCAGCAGATGATGGCTCCTTCCTTCCCTGTGCAGCAGGTGAACTGTAACGCTGTGCTTGTCCCTTCCCCCGTCTTCACCTCACCAATCATGATCCCACATAACAGTTTCATCACCCATCAGGCCACGCCCGCCTATACGCCTCACCCATCAGCCGCCCCACAAAGTTTACCACTACAACAAACTCAGCAGTTCTTTCAGATGCAGCCTCAGGGTCTGATTCACAGTGCTCCCACTCAGGCCTTATTCCACACCCCTAGCGTTCCGCAGCAAAGCACTGTGGGATACGTACAGccacaacagcagcagcaacagcatcATCACTCACAGTCCGGCAACCTGTCGGACTACAGAAACATGCTCCCACGGTAGCCCCGCCACCTGGGGGAAAAAGCCAAGAGATTGCTGGAAAAGCGCATTGAGCATTTAGCTCTGAAAGGCATGATGGGAAGGGACTCTCTCGGCTCAGGGGAAGGCTCGCTCCCGAGCCAAACCAAAATCGAGAAAGCCAAAGTCCCTCAAAGTTCCCATGACAGCAAATGATGGTGATAACGCCACAAGGCCCAAGGACTGTGCCTGGCCTGGACTGCACGCAGGGGATGCTGGGATACGTAGGAGGAGCCCGCAGGCGTGTGACCTGTCATGGAGACAGAGGTCACAGAGCAGTCAAGCAGGCGCTTTGATCGACACGTAAAGGACAGAAAGCCGTAGAGGGTTTTTGGTACTGTAATGTTACAGTTATCTAGActtttcaaaacacaaacatacaaaaataagacaaaatcaACAAATCAAGTAATGCCTTGACAGAGCGTAAACTCTTCTGCGTGTGTTCTGTCCTCAACCGCTACTAAAATAGTAACTAAAAGAGAAACCGCCCCaccaagaagaagaaaaatacatgAACTGATCATATTTCATGTGCGTGTGCTGATGAGAGGAGCTGGGCATAATTCAGCGAAGAcccaaatatatttgaaaaacatttggcTTCCTGTTATCATGTGCAGAGCAGGTTCGGCCCCCTCCTGTAGTTATGTTAACACTAACGTAAAGAAACTTGAATCACGCtgtatatttctaatatttaagaGCAAGTTCGCATTAGGGCAAACCTTCCTATTGCTCAGCTCAACTCAATCCCtgttactctttattttttgaTCCACTGTACTGTACCTAGGGTTTCTCCACATGTTGAGTTCCGAAATATCATATTTcagtactttttatttcattttacggTTATAAACCTAGCTCGTCAGGAGAAGCATGTTGGTTTCACTGATCAAACAGTTCTTTGAGTTTTCAGATGTGCATGTGGTCTGCCTGTTCATACAGAAATCTAAATTTGATTTGATGTCAATGTAAGCAGGACAGATGTGCTTCAATATTTAGTTTCAGTGTTACACAGGGATGAAGCTCTGTTTAATTTATGCTTCGTAGTAGAGGGACTGTGTTGATTGTTTTATGGTGGTGGGGCGCGAGTGGTGCAGCAGTTAAACTGCGAAAATgaagatgtaaaataaaacggTAATGCATGTGGAATGATTGAAGACAATCACAACGTCATGGCTGCAGAAATGGAAATGTTCTCATCTGCCTGTCACTTTGGGCAAAATGTTTGGCAAATACAACtcaaatattagtaaaaaaaaaaataccccattattattatttttttttttgtattattatttttgaggaATTGTTGTAGACATGGAAGTGTTTAGATGTTATGAAAAATCACAGACAAAAATCTGACAATCGGGGAAACTTCAAGCTTGCACTTTCCTCCATCCTGTCACGCATAGCACATTTAAAGGCTGGTGCtggttatattattttttttaaaactaagaCGATTCTGTTCAAGACAGTTTAGATCATGTGCCCTTCTGTATGTCGTGCAATGCAAATCGAAAAACAAGAATGTGTGTAATTTATACTTATCGAAGAGATTTCTGTTTTTCGTCAGGTATGTTTTCTTGTATTAGCAAGAAATGCTTCGTATTAGTAAAAGCCAACGTGCTGTTTGAATGAAAACCGAAAGTATTTTTGTACTAAAATCTCCTCGACATTCCTTCAGTCATGTGTAGAAAGCGTGAAACTCCCCGACTCTCTCAGGTGTGACATCTCCACGCAGGTGTCTAGCTTGTTAGTACGCTGTTGCTGGTCTAAGCCGGTTACTAGGTGGTCATTAGCTGCTCCAACCATCTGGGACCAGCAACAAACCAGACGGAGGAGCTATAAAACACCAACTTCAAAACGAGTAGGACAAATAAATCCAAAGGTTCTGACTTACGCCAGTTGCCACTGTGATGGCCATTTAGTGTGTGCATCGCCCCCTGAACAAAACGAGCTGTTTCATCCTTCATTTATTGCCCATTTGTGGtgttttcatgaaatattttgcCAGCTAGGCTCGAACATTTCGtctcaaatgtttcttgagttaAAGGTTTGATTGTTTTgcagatgtgtttgtgttcattgGGTTGTGAGTGGTAGATGGAAACTGTACCGACTCTCTCATCTTTGTTCTCTTTCTCTATGAAACTATGCTCTTGTGGAGACTGCACTTTATTCTTTATCCCTTCTTTAAGTCTTTTGCtttgtgctctctctctctctctctctctctctctctctcttttctctctggcCTAAATTTCACCCCAAAAGTGTCTGTTCTGATGAGGTTTTAGGCCTCATGGATTCGTGAGcgtgtgttttatgtgtgtgttgtgagtgTATGTGTTATCTGTGTTACCTGAACTGGTGACATCGtcaatgcatttatattctaCCAGGTGAGGGGAAGAGACAGAAAGTGACACCTGGTTTAAACAGCCATCTCTGCTGATACTCTGCAGAAAATACACGGAAGATATTGTAATATAAGATATACAGAAAATGTCTAGAAAAATatagttgtttattttataagatGTCAAATAGattgaaataaatttatatGCAGTGTATGATTTGAAAGTAAAAACAGAGGTATTTTGTAACAGATTAATTATTGAAGTGTCTTACTTTGGGGGGACGTAAAGCTTTCTGTTTGTCGGTTCAGCGAGTTGATGTTGCACAGTCAATGTATGGCTtgtttttcccccttttattCTTCTGTGTACATATACCATCACAACAAGCTTTAAcatattgttaatattgttttaaaagaaattaataataaaaaaaaagtttacattctGAAA

Function

symbol description
npas2 Contributes to double-stranded DNA binding activity. Acts upstream of or within circadian rhythm and photoperiodism. Part of transcription regulator complex. Orthologous to several human genes including NPAS2 (neuronal PAS domain protein 2).

NR:

description
neuronal PAS domain-containing protein 2-like isoform X1

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0009648 photoperiodism biological_process
GO:0007623 circadian rhythm biological_process
GO:0007165 signal transduction biological_process
GO:0005634 nucleus cellular_component
GO:0005667 transcription regulator complex cellular_component
GO:0005737 cytoplasm cellular_component
GO:0004871 obsolete signal transducer activity molecular_function
GO:0003690 double-stranded DNA binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0046983 protein dimerization activity molecular_function

KEGG:

id description
K09026 NPAS2; neuronal PAS domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238929.1 False 5871 mRNA 0.45 22 11527062 11573963
XM_043238930.1 True 6111 mRNA 0.45 22 11527062 11555047

Neighbor

gene id symbol gene type direction distance location
radx LOC107672617,LOC107756553,LOC107680386,LOC107597314,LOC107680354 coding downstream 1025 11519575 ~ 11526037 (-)
brwd3 brwd3,LOC107672566,LOC107680390 coding downstream 64301 11442622 ~ 11462761 (-)
chmp1b chmp1b,LOC107672547,LOC104940072,LOC101476317 coding downstream 84641 11439109 ~ 11442421 (-)
cnga2b LOC107672575,LOC107733223,LOC107597245,LOC103911065,LOC108443773,LOC105893178 coding downstream 90790 11431860 ~ 11436272 (-)
LOC122345557 LOC107733220,LOC107672464,LOC107680363,LOC107597312 coding downstream 96002 11412416 ~ 11431060 (-)
vma21 vma21,LOC107741184,LOC107565438,LOC107680358,LOC107756551,LOC107672888,LOC107597345 coding upstream 6871 11580834 ~ 11582813 (-)
mtnr1c mtnr1c,LOC107756550,LOC107741285,LOC107672899,LOC107680355,LOC108442058 coding upstream 9992 11583955 ~ 11599842 (-)
tnfsf10l4 LOC107741286,LOC107680360,LOC107565437 coding upstream 45147 11619110 ~ 11621440 (-)
rpl36a LOC100304549,LOC100219516,LOC106514001,LOC103353280 coding upstream 76476 11650439 ~ 11652716 (-)
LOC122345659 NA coding upstream 108257 11682220 ~ 11689922 (-)
G35434 NA non-coding downstream 196696 11304281 ~ 11330366 (-)
G35522 NA non-coding downstream 214232 11311549 ~ 11312830 (-)
G35450 NA non-coding downstream 277056 11249199 ~ 11250006 (-)
G35499 NA non-coding downstream 306171 11219968 ~ 11220891 (-)
G35501 fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227 non-coding downstream 313325 11212039 ~ 11213737 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding upstream 96994 11670957 ~ 11674817 (-)
G35594 NA non-coding upstream 118587 11692550 ~ 11694947 (-)
G35597 NA non-coding upstream 122228 11696191 ~ 11697674 (-)
G35599 NA non-coding upstream 123985 11697948 ~ 11699666 (-)
G35601 NA non-coding upstream 127270 11701233 ~ 11703708 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 59940 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 557944 10960311 ~ 10969118 (-)
G35384 NA other downstream 600899 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 652998 10868364 ~ 10874064 (-)
G35122 NA other downstream 1065353 10461208 ~ 10461709 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other upstream 9817 11583780 ~ 11652627 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 221693 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 591440 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 743840 12317803 ~ 12319685 (-)
G35936 NA other upstream 927951 12501914 ~ 12505958 (-)

Expression


Co-expression Network