LOC122345102 (LOC107691787,LOC107600611,LOC107684345,LOC107595997,LOC107684346)


Basic Information

Item Value
gene id LOC122345102
gene name LOC107691787,LOC107600611,LOC107684345,LOC107595997,LOC107684346
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24253333 ~ 24264718 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238935.1
GAATAAAAGGCCTGGTTATGTTTCTGAAATTACCCATTTCACAGCGGCTCTCACAGACAGGGGAACAGctttttcaaaagttttaaaGGATGGCATTATTTAGGAAATTGTTCAACAAGATTACTGATGATGACAGCAGCAGGGGTTGTAAAGGTGGCTCAGCAGAAACAGCATATTTTGGAACAGTAAAGTCTGATCCGAAttttaatgctgaaaatgaTGCTGCTAAATTGAAGAAAGCCATTGAAACCAAAGGTGTGGATGAAGCCGCTATCGTGGAGGTGCTGGCAAAGAGGACCAATAAACAAAGACAACAGATCAAGGAAGCTTATCGGCAGAGTACAGGAAAACCTCTGGCAGATGCGCTAAAAAAAGCTTTGAAGTCAAATTTTGAGGACGTGGTCCTGGCCTTGCTGATGACACCCCCTGAGTATGACGCCTTCGAGATGAAAAGAGCCATGAAGGGTCTTGGGACAAAGGAAGCTGTCTTAAGTGAAATTCTAGGGACCAGATCGAACAAGGAGATTACACTGATGAAAACTGCTTTCAAAGAAGcctaTGGAGAACTGCTGGACGAACAAATTAAAAGTGAAGTTAGTGGGAATCTTGAGACTGCCCTGCTTGCTCTTTGCAAGGCTACCAGGAGTGAAGACTATAATATTGACGATGGGCTTGCAAAGAGCGATGCAAAGGCTCTGTTTGAAGCAGGAGAGAATCGGGTTGGTACTGTTTGCTCTGTGCTGATTGATGTGCTCACATCCAGAAGTGAAGCTCAGTTGTGCAAGATTTTCCAGTATTATGGCAATTACAGCAAGCAAGGTTTGGCCAAAGCGCTGGAGAGTGAGCTGCATGGAGACCTTGAGGACTGTCTGATGACCCTGGTGAAGTCTGCTTGGAACAAACCTGCCCTCTTTGCAGAAAAACTCCACCTGGCTATGAAGGGGTTAGGAACCAATACTAATACACTGACTCGCATCATCGTGAGCCGTTCAGAAATCGACCTGCTGAAAATCACTCAAGAATATAAGAGGATGTATGGCAAAACCCTTCAGGAAGACATTCTGAAGGAAACAAGTGGAGATTATGAGAAGATTCTGCTGACTCTCTGTGGAACTCAGTATAATATCCCTAGCTACCACTTGCCACACTGTCTTAGTGATAATTCAAGAATAAAAAGACAGGTACTGTTCTTGAAATCACCTACCTTATTTCAGCTTTTACGGACTTCGCAGAAGAACAGCATCTTCAAAGCTCCCAAGATGgattttttccaaaaattatTCCAGCATGCTAATAAAGACGAGAGTTTTAAACCTGCTCCTTTTGAGACGGGATACTTTGGAACAATCAAGGCTGATCCCAGTTTCAATGCCCAGAATGATGCTGCAAAATTAAAGAAAGCCATTGAGACCAAAGGTGTGGATGAAGCCGCTATCGTGGAGGTGCTAGCAAAGAGGACCAATGAACAACGACAAAAGATCAAAGGGGCTTATCAGCAGAGTACAGGAAAACCTCTGGCAGACGCACTGAAAAAGGCCCTGAAGTCAGATTTTGAGGAAGTGGTCCTGGCCTTGCTGATGACTCCTACTGAGTATGATGCCTTTCAGATGAAAAAAGCCATGAAGAATCTTGGGACAAACGAAGCTGTCTTAAATGAAATTCTGGGGACCAGATCAAACAAGGAGATTTCAGCACTGAAGACTACTTACAAAGAAGTGTATGGAGAGCTTCTGgaggaaaatattaaaagtgaagtcAGCGGAGATCTCGAGACTATACTGCTTGCTCTTTGcaagGCTACCAGGAGCGAAGACCGTAACGTTGACGAAGGCGCCGCTAATAGTGATGCAAAGGCTCTTTTTCAAGCAGGAAAGAATCGGATTGGCACCGTTTGCTCTGTTCTGATTGACATCCTCACAAACAGGAGTGAAGCTCAGTTGTGCAAGATTTTACAATGTTATTGCCAACTGAGCAAAGACGGTTTAATCAAAGATCTTGAGGGTGAACTGCATGGGAGCTTTGAAGACTGCCTGACGACCCTGGTGAAGGCTGCTTGGAACAAACCGGCCTACTTTGCAGAAAAGCTCCACCTGGCTATGAAGGGGCTAGGAACCAACACTGACGTACTGACACGAGTCATCGTGAGCCGTTCAGAAATCGACCTGCTGAAAATCATTCAAGAATACAAGAAGATGTATGGCAAAACCCTTCAGGAGGCCATTCTGaaagaaaCAAGTGGAGATTATGAGAAGATCATGATGGCTATCTGTGGTACTCCGTAGACAACgatatcattttttattcaaacgGCTCGCACTAAACACATTTGTTCATTAAATGGGTGTATCCGTGACCTTTGTGAACACCTAATCTCCTCAAGGTGTGTCTCTTCAGGAGTGGTTCATTAAAACTCTTTGTGCAA

Function

NR:

description
PREDICTED: annexin A1-like

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238935.1 True 2422 mRNA 0.44 27 24253333 24264718

Neighbor

gene id symbol gene type direction distance location
pcsk5a pcsk5a,LOC107728213,LOC107691788,LOC107684380,LOC107730328,LOC107596014,LOC107600598 coding downstream 702 24230346 ~ 24252631 (-)
ntrk2b ntrk2b,LOC107691713,LOC107728215,LOC107600581,LOC107730333,LOC107596017,LOC108443857,LOC103044160,LOC108259739,LOC107684341 coding downstream 65848 24166208 ~ 24187485 (-)
tmem150ab tmem150ab,LOC107684378,LOC107600579,LOC107572579,LOC107728219,LOC107691718 coding downstream 155159 24092380 ~ 24098174 (-)
fkbp6 fkbp6,LOC107695148,LOC107600609,LOC107691791,LOC107728208,LOC103911693,LOC107730305 coding downstream 166829 24082446 ~ 24086504 (-)
fzd9a LOC107600608,LOC107728207,LOC107691792,LOC107695150,LOC107572577,LOC107730317 coding downstream 180470 24070279 ~ 24072863 (-)
LOC122345313 LOC107681049,LOC107706956,LOC107574963 coding upstream 33812 24298530 ~ 24317831 (-)
cd180 LOC107742410,LOC107681052,LOC107600612 coding upstream 142277 24406995 ~ 24409513 (-)
pmchl LOC107683707,LOC107575048,LOC107738923,LOC107596031,LOC107730319,LOC107684382 coding upstream 265690 24530408 ~ 24530963 (-)
npr2 npr2,LOC107559735,LOC107746469,LOC107730344,LOC107684353,LOC107595992,LOC107683705,LOC108260050 coding upstream 281430 24546148 ~ 24585135 (-)
tprn tprn,LOC107559738,LOC107746472,LOC107684357,LOC107595990,LOC107730352,LOC107697983,LOC107734963 coding upstream 332369 24597087 ~ 24613743 (-)
G39123 NA non-coding downstream 33806 24218993 ~ 24219527 (-)
G39122 NA non-coding downstream 34903 24218100 ~ 24218430 (-)
G39121 NA non-coding downstream 38173 24214526 ~ 24215160 (-)
G39120 NA non-coding downstream 40574 24212442 ~ 24212759 (-)
G39059 NA non-coding downstream 146070 24101841 ~ 24107263 (-)
G39137 NA non-coding upstream 12756 24277474 ~ 24280889 (-)
G39274 NA non-coding upstream 150182 24414900 ~ 24490792 (-)
G39285 LOC107738919,LOC107681053,LOC107600587,LOC107595995 non-coding upstream 205893 24470611 ~ 24479055 (-)
G39296 NA non-coding upstream 254949 24519667 ~ 24520387 (-)
G39298 LOC107683704,LOC107738921,LOC107600589,LOC107595993,LOC107730350 non-coding upstream 256844 24521562 ~ 24522021 (-)
G39113 NA other downstream 52837 24197705 ~ 24200496 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other downstream 255594 23979664 ~ 23997739 (-)
G38973 NA other downstream 365653 23887303 ~ 23887680 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other downstream 496745 23751880 ~ 23756588 (-)
LOC122345364 NA other downstream 647585 23602236 ~ 23605748 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other upstream 746 24265464 ~ 24277304 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other upstream 323006 24587724 ~ 24594116 (-)
naa38 naa38 other upstream 481954 24746672 ~ 24748610 (-)
LOC122345923 NA other upstream 489484 24754202 ~ 24758668 (-)
G39413 LOC102215562 other upstream 1017168 25281886 ~ 25282286 (-)

Expression


Co-expression Network