LOC122345107


Basic Information

Item Value
gene id LOC122345107
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 26553706 ~ 26566423 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238939.1
ATGACTGAGGCTGTAGACTGCATGACAATAAACGCTGTTTGCTGTTGTAACGAGGATGATTTTTTCATCAAGATTGAGACATGGCACAAGCCTGACCTTGGAACGCTAGAGAAtGTTCACAAATTGGACAGTTCCACATGGAAGTCTGTGGAGGTCACACCCATTGATATTGCAGACAAAGAACAAGTAATTCCTGTTGACTACAAGGCAGATGAAGATCCGGCTATTTTTCATTCAGTCAAGACTGGCCGAGGACCACTGGGCCCGAGTTGGAAGAGAGAGCTGGTTAATAACCCCACTGCTTACTTAATGTGTTCTTACAAGCTGGTGACGGTCAAGTTTAAGTGGTGGGGCCTTCAGAACAGAATAGAAAGCTTCATTCACAAGCAAGAGAAGAGGATCTTCACCAACTTCAACCGTCAGCTGTTCTGCTGGATTGATCAGTGGGTGGAGCTCGACATGGAGGACATCAGTGAAGGATGGAAGAGGACGCAGAAGGAGCTGGAGGAGGTGAGGCATAGACAAGGTGAAGTGCGAGGAACCAGTGCTGCTGATGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238939.1 True 561 mRNA 0.47 8 26553706 26566423

Neighbor

gene id symbol gene type direction distance location
LOC122344705 mn1,mn1b coding downstream 9193 26532335 ~ 26544513 (-)
trnag-gcc_64 NA coding downstream 442304 26111332 ~ 26111402 (-)
trnag-gcc_63 NA coding downstream 444136 26109500 ~ 26109570 (-)
trnag-gcc_62 NA coding downstream 452297 26101339 ~ 26101409 (-)
trnag-gcc_61 NA coding downstream 461710 26091926 ~ 26091996 (-)
LOC122345741 pitpnb,LOC106585622,LOC108437411,LOC106580376 coding upstream 24502 26590925 ~ 26610395 (-)
kat5b kat5b,kat5a,kat5,LOC107597226,LOC107592273,LOC107732605,LOC107680373,LOC107687657,LOC108427799 coding upstream 48719 26615142 ~ 26625016 (-)
im:7154036 LOC107730539,LOC107674895,LOC107564073,LOC107755658,LOC107702932,LOC107571525 coding upstream 59770 26626193 ~ 26637865 (-)
stip1 stip1,LOC107564074,LOC107674894,LOC107571522,LOC107755657,LOC107702934 coding upstream 72731 26639154 ~ 26647535 (-)
flrt1a LOC107695997,LOC107741023,LOC107702935,LOC107564076,LOC107755656,LOC107571526 coding upstream 106674 26673097 ~ 26719746 (-)
LOC122344941 NA non-coding downstream 179884 26372619 ~ 26373822 (-)
G39585 NA non-coding downstream 400003 26153465 ~ 26153703 (-)
G39579 NA non-coding downstream 434623 26118474 ~ 26119083 (-)
G39574 NA non-coding downstream 770115 25782979 ~ 25783591 (-)
G39572 NA non-coding downstream 825236 25728237 ~ 25728470 (-)
G39712 NA non-coding upstream 310167 26876590 ~ 26883175 (-)
G39738 LOC107705276,LOC107586737,LOC107671348,LOC107663665,LOC107721875 non-coding upstream 515578 27082001 ~ 27084786 (-)
LOC122344810 LOC107662059,LOC107548517 non-coding upstream 549544 27115967 ~ 27146962 (-)
LOC122344809 LOC107671984 non-coding upstream 560706 27127129 ~ 27128456 (-)
LOC122344808 LOC107671984 non-coding upstream 573992 27140415 ~ 27142658 (-)
LOC122344921 NA other downstream 985020 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 1271420 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 1795038 24754202 ~ 24758668 (-)
naa38 naa38 other downstream 1805096 24746672 ~ 24748610 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other downstream 1959590 24587724 ~ 24594116 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 533392 27099815 ~ 27107385 (-)
isca1 isca1,LOC107702919,LOC107662049 other upstream 816498 27382921 ~ 27398741 (-)
LOC122344874 NA other upstream 1319618 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 1689405 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 2757559 29323982 ~ 29326115 (-)

Expression


Co-expression Network