CI01000004_15825817_15827475 (TEP1)


Basic Information

Item Value
gene id CI01000004_15825817_15827475
gene name TEP1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15825817 ~ 15827603 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15825817_15827475.mRNA
CTGGTCAGACGAGGTACGTCCTATCGGCGTGATGGCAAATGATAGCAAGAGCTTTTGGCTGTTGGGGCAGAAAAACGGTGTACTGTACATTGGCTTCATTTTGTCTGTGAGTTCAGATCACAGTCACTTCTTAACCTTTTGTGACGATGCGACTTTTTTGTGTGTGGTGATTATAATGGGAACATATGGTTCAACCACCCTCCTAATCCGTGCAACTGGACTGAAAGAAAACCGGCAAGCACACACAGACAAAGTGAGCGTACTGCGGCTTACCGAGAGCCTCATCATCTCTGCGTCTTACGACAGATCCGTCAAACTGTGGGACAGACACACTAAGAAACAGGTTGGCATGTTTGTGTGTGGAGGCCCCGTCAAGGTGCTGGAAGTGAACCCTCGTGACCCCAAGGAAATCATTTGCGGAGATACGCAGGGTCAGCTGTACTTCCTGTCCTGGAGAGGTTGATTTTCTCATAGTCCGTACATTCTTCTTTAATCAGTTGTAATGTTGCATTCATTCTGCACATTTTCATTTACTTGCACGCATGGGGCGTCTTGCACTAATGATACTATTGCCTTAAACTAAACCATGAT

Function

symbol description
tep1 Predicted to enable RNA binding activity. Orthologous to human TEP1 (telomerase associated protein 1).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15825817_15827475.mRNA True 591 mRNA 0.46 5 15825817 15827603

Neighbor

gene id symbol gene type direction distance location
CI01000004_15787382_15803133 NA coding upstream 22673 15787382 ~ 15803144 (+)
CI01000004_15711867_15722470 PARP2 coding upstream 103235 15711867 ~ 15722582 (+)
CI01000004_15694735_15698103 SDR39U1 coding upstream 127396 15694735 ~ 15698421 (+)
CI01000004_15687242_15691238 NA coding upstream 134540 15685262 ~ 15691277 (+)
CI01000004_15645965_15650241 NA coding upstream 175543 15645965 ~ 15650274 (+)
CI01000004_15859240_15861471 APOL1 coding downstream 31637 15859240 ~ 15863449 (+)
CI01000004_15867404_15875293 NA coding downstream 39382 15866985 ~ 15875304 (+)
CI01000004_15892502_15900203 DCAF8 coding downstream 62770 15890373 ~ 15900852 (+)
CI01000004_15906907_15909647 HNRNPC coding downstream 79304 15906907 ~ 15909669 (+)
CI01000004_15930478_15944692 NA coding downstream 102875 15930478 ~ 15944744 (+)
G34196 NA non-coding upstream 45193 15779675 ~ 15780624 (+)
G34195 NA non-coding upstream 46319 15779166 ~ 15779498 (+)
G34194 NA non-coding upstream 48466 15777033 ~ 15777351 (+)
G34193 NA non-coding upstream 48809 15776790 ~ 15777008 (+)
G34192 NA non-coding upstream 49304 15776259 ~ 15776513 (+)
G34205 NA non-coding downstream 15529 15843132 ~ 15843402 (+)
G34213 NA non-coding downstream 59675 15887278 ~ 15887534 (+)
G34214 NA non-coding downstream 93080 15920683 ~ 15920886 (+)
G34215 NA non-coding downstream 96101 15923704 ~ 15924496 (+)
G34216 NA non-coding downstream 100898 15928501 ~ 15928750 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other upstream 733848 15091200 ~ 15097173 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 1788917 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 3170106 12646838 ~ 12652570 (+)
G31865 NA other upstream 3630670 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 4158158 11666900 ~ 11667659 (+)
G34220 NA other downstream 111754 15939357 ~ 15939950 (+)
G33815 NA other downstream 235812 16063415 ~ 16066464 (+)
G34400 NA other downstream 1149725 16971995 ~ 17025976 (+)

Expression


Co-expression Network