aif1l (aif1l,LOC107718642,LOC107570864,LOC107757519,LOC107596876)


Basic Information

Item Value
gene id aif1l
gene name aif1l,LOC107718642,LOC107570864,LOC107757519,LOC107596876
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6265737 ~ 6281395 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238967.1
CGTATGGGCGTGTATATATGATTAATTGAATTACAAACATCATTGTTCGTGATAAAAGAACACGTCGGCCCGCGTCGCCTCTCTTCACCGCGCGGTGGCGTTTATAGCCGCGTTCCCGGCGAGCGGGCGAGTGCATCACAGGGAGCCCTGCGCCTCTAAAGCAGCGTGAGACTCCCTCTCCCGCACAACCGACGCGAGCGCTCTCCCACAGCAGCGTCCCTCCTCTTGTCTTCCTTCATCGCCGGCGCTCGACCGTCCAGCATGCCTTCCAACCAGGACTTACAAGGCGGAAAAGCCTTCGGGTTGCTCAAAGCACAGCAGAGGGAGAAGCTGGAGGAAATCAATAAGGAGTTTATGGAAGATCAGAAATACAGAGATGAAGAGGATTTACCAGAGAAGTTGGATTCTTTTAAAAATAAATACGCCGAGTTTGACCTGAATGATCAGGGGGACATCGACATGATGGGCTTGAAACGAATGATGGAGAAGTTGGGTGTGCCAAAGACTCATCTGGAGATGAAGAAAATGATCTCGGAGGTGACGGGAGGTTGCAGCGACACCATCAACTACAGGGACTTTGTGAAAATGATGCTTGGCAAGCGATCAGCTGTTCTTAAACTGGTTATGATGTTTGAAGACAAAGCTAACGGGACCGGCTGTAAACCCGACGGACCCCCTCCCAAGCGTGACATCACCAGCCTACCATAGACCAGCGACGATGGATTCGATCGGCATCCCTGCATTCGCAAATCCCGCCCATTTAACATTAGGGGCTAGGTTTCTATAGCCTTATctagaatctttttttttttttttttttgccaagatCCAGGGAAAATCTTAGTTCATAGATggacaaaatgagaaaaaaaaaaagtgaaagatgTCTATATATATTTGCTGTGAAGAAGTCGAAGCGCAAAGTAGCTTTTTATAagtaaacaaatgtatatatttatatgaaaaaggTGTTTTTGAATAGTGTTTACAAGCACAAATCCTGTGGGTGAAGTACTAGTGACGTTTAATGTTTAACACTGCAAGTGTAAGTAAGCATAGGGTGTATGGGACGACACAATTTTAGCTTGCAAGGCGTATTTTAAGAATTAAGATTGAGAATTAAGATTTTTCGTCTTCCCCCGTAATGTgtgatttttgtattgttttttttattccagtacGTTCATGTTTGGAGTCGTGTTCGCTTGAAGAGTTCTTTAGCCTGTGCTATCAGTCCTAGATGCGCGTGAGGGTCTTTTAAGATTCAGTTAGTGCGCAGCCAtcaaaaagcttttcttttaagCTTGTTCTGTTTCTAAAAGCAGGATTTCCTTTGTAACGGTACAGGAAGGCGCGGGGAGTGAGGGAGATGGCAAAAAGGGACTTGCTTtgcttattcatttttctttgtacAGTCTTCAGACAGTTTCTTTTTAACCGGAGTCCGAATGACTGTAATCTGTAACGTTACTGTACCGTATAAGCACATTTAACTGTTAAGTACACACATTGTGCAGATTTGCTTTGAATCACAATTTTAGCATACGCTTTTTATAAATTTCCCCTGCTTGAATTGGAAATAAAGTTGTAGGAAAAGAGGCATTTCCGCAGCAGGGTAGATTGTAGTCACTATAGCCGATTAGCTTGAAACCCCTCTTTCCAAGTGCCTCACTCAGTTCCATGTAGCAGAGGTTTTGAGTGAAGATTGAGTGAAGCATCTTTGAAACGGATCTTGCGTGTGTTCGTGTGCGCTTGGAATTTTTATTCTGGTAAATCGTAATCCTGAGACATTCCAAGAATGTCGTCGCGTGGTGAGTCtttgaaaatgtcatgttttatcCCAGACTTGCGTGATGTGCAGCTCTGATGCAAATATTGCAGTAgtgctttttgtcttttttttttttttttttttttttttttaataatcttgtACTGTCCTCAAGTTTTCTTTCTAAGATGTGCTAtgtatggaaaataaaatgatctcgagtttttgttttttaagattaaatgttgaaaagaCATCACTAGGCAGTAGCAGGTGTGGCTTTCACTTCCATTTCAGACTTCGTCGGCAAACAAAGCAacttttatgtgtttgtttccaTCACGTCAGGTTTTATTTCTGTGCCTCTGTTCCACGTTTCTCTCATCAACatgctttttatctttctttttaaatcagtgaAGTATGAATTGAGGGCTGCATTGTACTGCTGTttattagaaatacatttttaatgagtaATTAGAATTTATGAATAGTTTTCTGTCAGCATATTAATTAACAGAGGCATTTGTAAActggttttcttttctttttttttggcaaacacCAAAGGAAGTAAATACCCTACTGTTACACCTAAA

Function

symbol description
aif1l Predicted to enable actin filament binding activity and calcium ion binding activity. Predicted to be involved in actin filament bundle assembly and ruffle assembly. Predicted to colocalize with actin filament and ruffle membrane. Is expressed in several structures, including alar plate midbrain region; fin; immature eye; nervous system; and periderm. Orthologous to human AIF1L (allograft inflammatory factor 1 like).

NR:

description
PREDICTED: allograft inflammatory factor 1-like isoform X2

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
K18617 AIF1; allograft inflammatory factor 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238967.1 True 2373 mRNA 0.41 6 6265737 6281395

Neighbor

gene id symbol gene type direction distance location
gfm2 gfm2 coding downstream 2435 6255418 ~ 6263302 (-)
enc1 enc1,LOC107655934,LOC107757521,LOC107570861,LOC107700930,LOC107596864 coding downstream 21919 6232266 ~ 6243818 (-)
ankra2 ankra2,LOC107757524,LOC107655931,LOC107596806,LOC107718646,LOC107700928,LOC107596181 coding downstream 166036 6096157 ~ 6099701 (-)
foxd1 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 coding downstream 176181 6086801 ~ 6089556 (-)
trnak-uuu_104 NA coding downstream 309366 5956299 ~ 5956371 (-)
lamc3 lamc3,LOC107596886,LOC107718641,LOC107700933,LOC107757520,LOC107570860 coding upstream 1379 6282774 ~ 6343615 (-)
ttll11 ttll11,LOC107700937,LOC107596909,LOC100002237,LOC107693816 coding upstream 481741 6763136 ~ 6792026 (-)
LOC122344933 NA coding upstream 546720 6828115 ~ 6830827 (-)
LOC122345679 NA coding upstream 554488 6835883 ~ 6839683 (-)
LOC122345680 LOC107710746 coding upstream 559323 6840718 ~ 6842727 (-)
G33615 NA non-coding downstream 87066 6178172 ~ 6178671 (-)
G33612 NA non-coding downstream 91624 6173847 ~ 6174113 (-)
G33610 NA non-coding downstream 93325 6172144 ~ 6172412 (-)
G33549 NA non-coding downstream 282934 5969242 ~ 5982803 (-)
G33544 NA non-coding downstream 306524 5953276 ~ 5959213 (-)
G33681 NA non-coding upstream 328054 6609449 ~ 6611492 (-)
G33683 LOC107588773 non-coding upstream 330345 6611740 ~ 6613055 (-)
G33738 NA non-coding upstream 477514 6758909 ~ 6847805 (-)
G33768 NA non-coding upstream 554564 6835959 ~ 6858383 (-)
G33791 rpl7a,LOC100194725 non-coding upstream 668149 6949544 ~ 6952310 (-)
G33175 NA other downstream 1642679 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 2072656 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 2367159 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 2512973 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 3305560 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 542776 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 641451 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 1100951 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 1425575 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 1437170 7718565 ~ 7721758 (-)

Expression


Co-expression Network