selplg


Basic Information

Item Value
gene id selplg
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12712197 ~ 12714531 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238971.1
TTTTGTGGAAGCGTGGTTGGTTACAAGTTAGTGTTTTAGGGAACTAAGACGTGATATTTAAGGCCCTCTCTTGCTCATTTGTGTTTGCGTCACAGTTTGAGAACCTCAACTTTACCCTGACGCTTCATGAGGTTTGACTTCCTGTATTTTCTGCAGCGAGTAGGTTTTGCGACATTACATTAAGTGTGCGAGGGGGACCTAACGTTCCATTGAACTCCAAATCAACGGTAGAAAAGGATGATGGCGATGGTGACTAACCGACTTGGGTGTTTACCAGTTCTTGTTTTGCTGCTGACTTTGAGCAGTTCGGTCACGTCAAGATCTTTTAGGATAAAAAGGGAAATTCGTGACATTGTAACATCGATAAACAACGTCACACACAGTACAGCAACCGTAGCTCGAGAAGAGTATGCAACCAGCACCACCGTGGAAACGTTGAAGGATTCGAGTACGTTACAGACAGTATCTGATTTAAATATCTCTGAGACTACAGTTTACCAGCATGCTCCAGATATGAACCACACCCATCAAAACTCCACTTCAGGAACCGAGAACCTGACAGTTGACCGGACGACAAGTAACGGGAGCGCTTTTTACACCCAACTTCCCACAATAAGTAACAGTACTGGACACATTTCTCATACAGGAAGTTCTGCCCCCACATTTCCTGCATCTCTGGAGCCTGGTAACGTAACAAGGAAGCTCATGACAGCAGCGACCACGAGAATGTCCACAGATGCAAAAAAACTTACCTCAACCACCGCAAAGAAATTGACCACAGCCACGACCCGCTCATGTTCCACTGCCTCTTCTCAAGCGGACGGACTTGTTAGTCGTTGTCTCATTGCCATCGCGTCCATGGCTGCTTTAACCACCATCTTCATCGTCAGTACCATCTGCCTGGCTACCAAACTCTCCGGATACAGATACAGGCATAAGGCGCATATTCTCCAGGAGACTGAGATGGTTTGCATTTCTGCCCTGATGAACGACACCGATCACCCGGTTCCAAAGCCAAGACGGCATCCCAAGAGTAACGGAGCACTGATCCCCAATACTGAGGACGGAGATCCTGACGGAGATAATCTCACTCTAAACAGCTTTCTTCCTGATACAGAGGGCCCTCTTTAGAAATTTAAACCCATGCACTGAAAAACAGGATGCATGAtagtatttcttatttttttgcttttaaacattaaGTCGGTGCTGAGGTTTGACCCAAACCCAGCTCTAGAATGGTTTGCACTCTCAGTTTATCTGTGGTAGAGGTTTGAGTTTTCCCACTTAGTGAAGTTCCAGCAACCATTTTTATGATTTGCAGTACAGCAATCcacatctttttcttttttttttttaaatcggtggaacatttaaaaaagaaattgtgtatagatgttatatttaatcatttctttgTTGCGATATTGTGCTACTACGTTCCCTGAGGAGCTCAGACATTAGTAGGGCTTGGCAGAATGTATTGCTGAATATAGTCTATTCCTGTCTGTGGTTCAGCTAGCGCTGTATAATTTACTCCAACAGAGTGATGTTGGAGATTATCACGGTCTGAATATAACGTGTTATCATTgcaaatgtacataaaatacatgCTTTTACTTTTACCCAGAGAGAGTTTAGCTTTTGCAAAGAAATGACGCTTTCTTTTTTGTGAACCTAAACCAATTAGATTAACCCtgcaaaaaactatttagtttgtttatttgtaccATAGTGGGGTTGTAGGTAGTTTAGTTTTCTGCTAATAATAGGCTATGTCAATTctatgtgtatgtaaatattgtgcaaaatgacatgaaaaagtTGTGTAGCGATAACCCAGTTATTGTTAGTCAGgctaatttttataaatattaaataaaaaattatatgca

Function

NR:

description
PREDICTED: P-selectin glycoprotein ligand 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238971.1 True 1895 mRNA 0.41 2 12712197 12714531

Neighbor

gene id symbol gene type direction distance location
tmem119a tmem119,tmem119a,LOC107597281,LOC107727157,LOC107741302,LOC107696065 coding downstream 143 12708388 ~ 12712054 (-)
sart3 sart3,LOC107654630,LOC107597276,LOC107741219,LOC107595944 coding downstream 10252 12685058 ~ 12701945 (-)
LOC122345863 NA coding downstream 38539 12668950 ~ 12673658 (-)
cmklr1 LOC107743349,LOC107597353,LOC107654611,LOC107741300,LOC107696054,LOC107595970 coding downstream 67700 12642656 ~ 12644497 (-)
LOC122345379 NA coding downstream 69675 12640377 ~ 12642522 (-)
coro1ca coro1c,coro1ca,LOC107741221,LOC107696062,LOC107595940,LOC106584990 coding upstream 1520 12716051 ~ 12756150 (-)
ssh1a ssh1,LOC107727158,LOC107597277 coding upstream 48049 12762580 ~ 12794103 (-)
svopa svop,svopa,LOC107696058 coding upstream 93979 12808510 ~ 12819678 (-)
isg15 LOC107654605,LOC107597356,LOC107741227,LOC107595933 coding upstream 117135 12831666 ~ 12832738 (-)
ptcd2 ptcd2,LOC107718650,LOC107700924,LOC107655927,LOC107757526 coding upstream 121425 12835956 ~ 12840936 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 72820 12637190 ~ 12639377 (-)
LOC122345380 NA non-coding downstream 105259 12602216 ~ 12606938 (-)
G35949 NA non-coding downstream 174395 12532390 ~ 12537802 (-)
G35928 NA non-coding downstream 196647 12463906 ~ 12515550 (-)
G35923 NA non-coding downstream 261432 12448214 ~ 12450765 (-)
LOC122345905 NA non-coding upstream 165530 12880061 ~ 12884157 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding upstream 199095 12913626 ~ 12916814 (-)
G36009 NA non-coding upstream 210212 12924743 ~ 12926462 (-)
G36012 NA non-coding upstream 218940 12933471 ~ 12933779 (-)
G36048 NA non-coding upstream 341038 13055569 ~ 13056705 (-)
G35936 NA other downstream 206239 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 392512 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 542787 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 896253 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 1059570 11583780 ~ 11652627 (-)
G36047 NA other upstream 339313 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 864530 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 939763 13654294 ~ 13699226 (-)
G36298 NA other upstream 1002593 13717124 ~ 13718543 (-)
G36336 NA other upstream 1103211 13817742 ~ 13818942 (-)

Expression


Co-expression Network