LOC122345144


Basic Information

Item Value
gene id LOC122345144
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14315699 ~ 14320923 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238980.1
CAACGTTTCTGGGAAAGTTACGACATATTCATAAGAACAGAAGCGAGGCCCGTACGGTGACGTTCCTTGCCTTGTTTTCACACGTTTGCAGCGCTACATTCCTGCTATGCAGATTCGTGACACATGCActatttttcactGTGCAAGTGACAAAAAACGAAACTTGTGACGGAACGTCTAAACGAAAGTGAAAACTGCATCGTTTTGGTCGATAACATTTCGGAACTAGACTTAAAATGGCTCATGCAACAAACGCCGAAGAACCGAGAGACCATTTTCCTACAACTGgaaataaatatttcatcctTTCACCTGGGATATTTAAGCCTAAAGAGGACATCATAAGAAAAGCCTTTGGACACATATCAGGTCAACTGGTGCATACCGTGGAGGAGTGCAACgtcattttggttttatgtGTTATCGCTTCAAGGGCAGGAACTGACATCGATGCTGCACTGAATGAACTTAACTCTCATTCAAAATCTAAACCAGCTGTTTTCGTGGTGCTTCATCACACATTTGACCCGGAGAAGATTGTGCCAGACAGCAGCAGTTATGTGAGCAGAGAGAATACTCTCACAGTGGACTGTCTGTTCCACGAGGACAAAGGACTCCTGAAGTGCGTGAGGAATGAAGACGCTCAGGCCAGAATCTGCCAATGGCTGCAACCACAAGTGGAGCAGACCTGGTGGATCTCAACACAAAACTACATAATGTGGGCTTTAGGCCATCTTAGTTGCTTCAAATTATGGCAAGTGGACACAGAGATCTCTAAAGTATCCTTTGAACCAGAACTTATGCTTGTCCTGCTGGGGATGTCTGTGCGTGAAAAGACTGCGGTTGAACGCTTGATACTCGGCAGACAGGAGAGTCGGTGCGATCCAGCTCCAGCTCCCCTGAAGAAGATGACAGTAGATACTGAAGAGGTGGACGGGGAACAGGTGGCTGTGATCAACACTCACGACTGGTTCAACTCCTGGATTTCCATAgaggaaatgaaacaaaaaatacaattctgtaTCCGTCTGTCTTCTCACAGACCTTACGCATTACTGCTAGTTATACCAGCAACAACGTCTTTTGAAGAGCAGATAAAGACATATGATATCGTTTTTGAGAAGAGCTGGGAGAAGGTCATTATCATTTTCACTGATAGCGATGAAGACCAAAAGCAAGACCACAACCTCCAGACAaaatttaagtttcattttcttaatattaatgagACTGAGAACAGATCTCAGGTTTCAGAGTTGCTGAAGAAAGTAAAGAAGACAGTGCCAGGAAATGAAGAGCAAACTAGTTTCTGTACACTGTCctaaaatcagaatcaggttGAGAGGAGAAGATAGGATATTAATACATTAGATTACAACTGCAAAATCCACaacatgtaatttatattactAAAGATGTGATCAGAAATTATGAGGTgcttaataaacaacaaaagacatCAGAAGATAAGTCCTCAAAATGATAGATGATAGTCAAGTTTATTAGTATCACACTTTAATCAAGAAATATTATTCTAAAGCAGCTTCATCGTGAAAGATTATGTGTATCTTTAGTCAGATGCAAACAACTGTAGCCAACTACATTTCACTATCATGGGATCTTATTGGGTCATCAGAGGTTACATCAACATTGGTTCTCCATTGTATTGTTTGCGGCACATTTGTTAACACGCATAAAGCCCGCTCTCACAGACAGAACTCGAGAAGAAGCTATGGAAAACCTTGAGAGAAGCTAGAATTCTTACATGGGTTAAGATTGTTAGGGATAACATCGCTACTGAAGAACTGCTTCACTGTTACCTTCAATACATTCTTCCCCCCACAAGAACTTTGATCAGGCTTACTCATTTTCTGTATTAGAAAAATCTAGTACAATGGTGAGCCAAACTACTGCTCAGCCAGTTACAGCAAAATCTAACAatacaaaatcattttgttaGTGTTTACGATACATTAATATCTTGCCTTCATGCCTTAAAGCTGTGTGTAAATGGCTTTGTGCGGTTTATAATCATTTGTTGCAGTGACAATGCTTATCATTATTTGGTGATGTTTGTCACTGCTATGCTAAGCACTTTAACTGAGGAGCTATGGCATCTCAGATACTTTGATCTCCTGAGAAACAGACAATGCAAACACACAGGCATCTTCAAGAAACCCCACAGAGTGACTGTGCAGGAAACTACCTTCCCTTCTGtcctttagtttttttctaaacCCCTCCACCCATTTACCCTTCTACTCAGTTTACTCAAAATGATGACATAAAAATACCAATGTCCTAATTGTCTGGCCTAAATATACTAATGAGACAACACCCCCACCCCGAGTCTCTGGGCCATCGATTATAGACGCCCGATCGAACTGACACTATAATATCTCCTACcccttttcattctctttttgcTTATCGCTAATATTCTGAACGATAAACTGTTAGTTACGTATTCAGTTGTGGCGTGGTCTCTGCTCCTGAAATGAAATCAGTAAGTcttatattaaaacatgttacAGCCTGCAGATTTTCACTGTAAGTTTCAGTATTTAGCTCATGCTTATTGTGTGAAATTGTAATTCatcttggaaaaaaataactctTAACGGTTTGTGAtctgtattaaaaatgtgtgtgtttgtgtgtgtgtgtgtgttctatgtttgtgcgtgtgccagaatatatattctatatatatatatattcaaaatataacttCCTGTTAAGCAGCTGATAATAAAGACTTAGTTCCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238980.1 True 2769 mRNA 0.40 8 14315699 14320923

Neighbor

gene id symbol gene type direction distance location
LOC122345143 NA coding upstream 1098 14311644 ~ 14314601 (+)
LOC122345145 NA coding upstream 5623 14306837 ~ 14310076 (+)
si:ch211-271e10.2 NA coding upstream 28259 14283080 ~ 14287440 (+)
mogat3b mogat3,LOC107746411,LOC107663414,LOC107661213,LOC107752358,LOC107596103 coding upstream 35410 14276095 ~ 14280289 (+)
gltpd2b LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519 coding upstream 89703 14221600 ~ 14225996 (+)
cxcl11.8 NA coding downstream 605 14321528 ~ 14322697 (+)
LOC122344908 LOC107599196,LOC107663386 coding downstream 3420 14324343 ~ 14326767 (+)
fras1 fras1,LOC107663364,LOC107661219,LOC107752371,LOC107746850 coding downstream 64744 14385667 ~ 14455284 (+)
LOC122345512 LOC107752366,LOC107661220,LOC107663395,LOC107599216,LOC107663363,LOC107746851 coding downstream 134494 14455417 ~ 14458914 (+)
LOC122345511 LOC107663395,LOC107599216,LOC107567471,LOC107752366,LOC107752365,LOC107661220 coding downstream 138531 14459454 ~ 14463721 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 268205 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 308297 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 312168 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 315362 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 340940 13974532 ~ 13974759 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 633 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 21000 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 22241 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 24961 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 144976 14465899 ~ 14466241 (+)
LOC122345142 NA other upstream 10395 14300043 ~ 14305304 (+)
G36495 NA other upstream 23199 14290420 ~ 14292500 (+)
ins ins,LOC107596207 other upstream 329993 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1508348 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1610454 12703352 ~ 12705245 (+)
LOC122345214 NA other downstream 12100 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 26639 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 325022 14645945 ~ 14652911 (+)
G36640 NA other downstream 397609 14718532 ~ 14720487 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 2070874 16391797 ~ 16395562 (+)

Expression


Co-expression Network