LOC122345145


Basic Information

Item Value
gene id LOC122345145
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14306837 ~ 14310076 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238981.1
GCAGAGCTCTGCTGATCGCGTCAACCAATAAAGCAAGAGCAACAAAGTGAAAGGACGTTTACTCTGACGAGACGCCGCGCGCATCGGGAACGggTAAAGAACATTTAGAAGACTAGTAGCCCATTTTTTCAGCAAAAAGAAGAAttgagaagagagaaaaatgcTGCAGGGAATTGATCGGTTCAAACCATCTCAAGGTGAAATCATTCAAGCAAAAAACTACTTCATAATTGAGGCGGGCAAGACATTCGGTCTGCGGACAGAGATTATAACTCATCTCCAAAAGCAAAGGCCTCTTGTGAAGGAGGTGCACGGTGTGGAAGACTGTGATGTGATTCTGGTTTTCTGCCCCATTGTTTCACGGGCTGGAACCGACATTGATGCTGCTTTGAATGAGCTTAATGCATATTCAGAATTCAAACCAGCTATTTTCATGGTGTTACATTACACATTTGACCATGATAAAGTTATACCAGACAGCAGCAGATATATAAACAGGACAAACACATTCACAGTGGACTGTCTGTTCAGTGAAGAGGGTTTGTTGACATGCGACAGGAATGAGAAGGCACTGACCAACATTgttcaatattttaaacatcagGGACATTCTGAGTTCctccaaatgaataaatggtgCATCTCCCTTCTATACATGCTGTGTACATTTACGTTTGGATTGTGCTTTTGGTTATTTGGCAAACTGGCAAGCGTATGGAACTactttacaaaagaaaaacgtGAATCCAGTACAAATAATAAAAGAAGCACACATAAAGAtacagatgaagaaaaaaatatctagaaagTAACAATGAAAACCTGAAGCATGCTGTTGAAAATATGATCCAGTTTAAATAAATCAGCTGAGAAAGAAGTTAAATGACGCATGGAGattgcagtttattttacaACAACACTATAAACTGTAATAGAATGTGTCAAGTTCTTGAATAGATGCAGATAGTGCTTTAAATCCTCAATGAACGTTATTATGGCGACCTTAGATTGAGAAGTTCAGTGATGACTGTATCACAGATGCATTTCTCCTATTGTGCTCTTGATACATCAATATATGACGCTGGTCCTTGTAGAATCACTCGTGAACATGGATAtgttaattgcaaaataaagcaacacaaaataaa

Function

GO:

id name namespace
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG:

id description
ko05133 Pertussis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238981.1 True 1148 mRNA 0.39 8 14306837 14310076

Neighbor

gene id symbol gene type direction distance location
si:ch211-271e10.2 NA coding upstream 19397 14283080 ~ 14287440 (+)
mogat3b mogat3,LOC107746411,LOC107663414,LOC107661213,LOC107752358,LOC107596103 coding upstream 26548 14276095 ~ 14280289 (+)
gltpd2b LOC107663399,LOC107746407,LOC107734136,LOC107661211,LOC107596106,LOC107580519 coding upstream 80841 14221600 ~ 14225996 (+)
gnb2 gnb2,LOC107663406,LOC108428986,LOC107661206,LOC107746402 coding upstream 150303 14145969 ~ 14156534 (+)
hsd20b2 hsd20b2,LOC107596111,LOC107661247,LOC107734140,LOC107663385 coding upstream 176788 14124109 ~ 14130049 (+)
LOC122345143 NA coding downstream 1568 14311644 ~ 14314601 (+)
LOC122345144 NA coding downstream 5623 14315699 ~ 14320923 (+)
cxcl11.8 NA coding downstream 11452 14321528 ~ 14322697 (+)
LOC122344908 LOC107599196,LOC107663386 coding downstream 14267 14324343 ~ 14326767 (+)
fras1 fras1,LOC107663364,LOC107661219,LOC107752371,LOC107746850 coding downstream 75591 14385667 ~ 14455284 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 259343 14046777 ~ 14047494 (+)
G36408 LOC107746439,LOC107663381,LOC107599230 non-coding upstream 299435 14005771 ~ 14007402 (+)
G36406 NA non-coding upstream 303306 14000526 ~ 14003531 (+)
G36405 NA non-coding upstream 306500 13999100 ~ 14000337 (+)
G36332 NA non-coding upstream 332078 13974532 ~ 13974759 (+)
G36503 LOC107599196,LOC107663386 non-coding downstream 11480 14321556 ~ 14326754 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding downstream 31847 14341923 ~ 14342507 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding downstream 33088 14343164 ~ 14343769 (+)
G36510 NA non-coding downstream 35808 14345884 ~ 14346835 (+)
G36573 NA non-coding downstream 155823 14465899 ~ 14466241 (+)
LOC122345142 NA other upstream 1533 14300043 ~ 14305304 (+)
G36495 NA other upstream 14337 14290420 ~ 14292500 (+)
ins ins,LOC107596207 other upstream 321131 13984097 ~ 13985706 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other upstream 1499486 12803789 ~ 12807351 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other upstream 1601592 12703352 ~ 12705245 (+)
LOC122345214 NA other downstream 22947 14333023 ~ 14337765 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other downstream 37486 14347562 ~ 14349991 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 335869 14645945 ~ 14652911 (+)
G36640 NA other downstream 408456 14718532 ~ 14720487 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 2081721 16391797 ~ 16395562 (+)

Expression


Co-expression Network