fkbp15a (LOC107691045)


Basic Information

Item Value
gene id fkbp15a
gene name LOC107691045
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 7134078 ~ 7141495 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238992.1
cttttgttaaaaatgagtTCTACATTACATACTTTTATATGCATCATGGatcagcattttaattttattcataattgttttaaaaatacgaTATTTCTGTAACAAAGCTGCAGTTCAATCGCTGACCCACGGGAGCCTCCATATCATCCCCTATCTTTCACACTCGACCCGTCACGTGCTCGCGCGCGTGCGCGTGCCAGCCGCCGTGTCCTCGCGCTTACCTGTGCTCATCATATCGCGCGAGCGCAGAGTATTTGTATATTCACTGAAGCCAGTTAACAGTACTCAAAAACTGTAGTATGGAAAAAGTTAAAGACGTTATTCCTGATTATAACGAtgaagactttctgtgtcctaAAAGTGGGGCAAAGTTGGCCTCTCTCTTTGGTCTGGACCGAGCAGAGAGTCAGGGAAATGAGTCCTTTCAATTCACCGCCCCTAAACAGCCAAAAAAGTCCTGCGCCGTATTAGGCCCGCCTCCCCAGAAGTCCGTCCCTCCTCCCTGCGCTCCAGCTGTGCTGTTTGCTACAGCTGTTCATGCATTCAGCTTTGTGAATGGACAGTATGTAAAGCAAGGCAAGATAGGAGCTGCTGTTTTAGGAAACCATGTCTCCAAAGAGTACAAGATTCTTTTATACACCAATAAACAAAAGCAGATCAGCGCGGCTCGAATCCATCGTGGATTTGTCCTTACAGTTCAGCCTTGTAACTATGTCACTTTCTATGATGACCAGCAACAAAACTGGTCTTTAATGTTTGACTCGGCAAGGTCCAGGTCTGAGTTCTGTAAGGAgGTGTGCGTGGCTCGGTGGAACAGTGAGGCTTCGTCAGACTCTCTGGTCACTCAGGACCTGGTCCAAGGAGAAGGTCAAGCTGTTGATGTCGGGGACACAGTGGAGGTGGCCTATTCTGGATGGCTTTTACAGAACCATTCTCTGGGACAGGCGTTTGAATCCAATTTAGGCAAAGAAAAGCTGCTGCGAGTGAAGCTTGGGTCGGGAAAAGCTCAGAAGGGATGGGAGGACGGGATGCTTGGCATGCAGAAAGGAGGTCGACGGCTCCTTATCGTCCCTCCTAGTATAGGTCATGGGTCAAAGGTCATCCTTAACCATGTGCCAGCAAACAGCACTCTGGTGTTTGAGGTTGAGATTCATAGAGTTAAATTTTCCAAAGGCAGACATAGCCAGGCATCATTTGACACCTCAAGGGCATCCCCAAGCACCTGTTCAGACTCTCAGACTGAAGACAGCACTAGCCAATCAGTCGCCGATACAGATAAGTCAAAAGTCCAAGAACCTAAGGGGAACGTGGCATCTGTATCTCTGACAAGTTCAGGTGCTTCCAAATCTAAAATAATCTCACGTATAGCCAAGATGGGTCAGCCAATGCTTCCCTTTCTCACTGGGGCCATTCCGGCTCAGCCTGACCCCAGCGACTCGGAAACAGAGGATACCAGTGGAGTTATTTGTGATCCCACTCCTTCACACTCCCCCAAACTTGCACCAATGCCCTGCaCGTCGTATCCGCCTGACGATGCTCAGAAACAGGAAGCCGTGCCTCCAGAAGGAGACTTAAACACTACTCAAGGCTTTCAGCAATATTCCTTCAGACAAAATCCTTATTTTCCAACACAGCTGGATTCATTTGCCTCAGTCTACCCATCCCAGCACATCCCATACCAAACCCCTGATATTACATCATTCCTGATGTCTGACGCTCGCCGACACAACACAGAAATTCTGCTGGCTATTGAAAAGCTGGCACGCAGAGTGGACCAGCTGACCTGCAAGgttgATGATCTGCAAAAAGAGGGTAACTTCTCTTTCAGACTGTCCTCTGCATCCTTAGAGACAAACGTGATCCTACAAAACATTCAAAGAATTATTCAGgagagTATGTGTCTGAAAAAGGAGGTTCTGGAGAGGAGTTCTCAGGTGGAGGAAGAGAATCACAAAACAGAGAGGAATAAGAGGTATATGGAGCAGCAAGACAATCAGACTTCCCCCCAACAGACCGAGCAGGAAAAGGTAAAACAACTGCTGAATGAAGTGTTCGAGTctctcaggacagagtttgattCACAGGAATCTTACAGCGGACACGCGGTGCTTGAGATTCTCCAAAAAACCATCAAGAGTATCTCCGTGAAGCTTCTCTCGGACCCATGGGAACTGGAATCAGGCGTAGAGGAAGATGAGGTAGAGGAAGAGCATTTGCGAATCAGAAACACGGAGAAGGAAGACCTTAAAAAGGAAGCATTTATGCTAACAGAACAAATGTAGATATTGCAGCATCATCGGCTGTTCGCATACTGAATGGGGAATTGCTACCGTCCTCATCACGTCTCAGTGTTTCAGAGCAGGCAGTTTTTCAGGGAAGAACACAGATATGGCTGGATATGCCTAACAAGTTTAAATCAAGTTAACTAGATACACAAAACTAATCTTTACTgcagttttctttgaaaaaattatttaatatagtatttacgttttatttataattttaaaaaattgcaaaatcAAGACTAACCGAATCGACttgtgcattaatattaatttattaa

Function

NR:

description
E3 ubiquitin-protein ligase LRSAM1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238992.1 True 2566 mRNA 0.45 21 7134078 7141495

Neighbor

gene id symbol gene type direction distance location
rpl12 rpl12,LOC107587392 coding downstream 10080 7121409 ~ 7123998 (-)
LOC122346223 NA coding downstream 11614 7122339 ~ 7122464 (-)
LOC122346221 NA coding downstream 12229 7121722 ~ 7121849 (-)
ccn1l1 cyr61l1,LOC107723346,LOC107691050,LOC107740969,LOC107693831,LOC107587477 coding downstream 24246 7105673 ~ 7109832 (-)
lmo4a lmo4a,LOC107691029,LOC107723366,LOC107597048,LOC107587399 coding downstream 31347 7090165 ~ 7102731 (-)
crata crata,LOC107740932,LOC107691030,LOC107723360,LOC107587366,LOC107597084,LOC107693856 coding upstream 134 7141629 ~ 7148537 (-)
ier5l ier5l,LOC107723335,LOC107598287,LOC107693861,LOC107691035,LOC107740934,LOC107587377 coding upstream 15999 7157494 ~ 7162360 (-)
ndor1 ndor1,LOC107740959 coding upstream 138950 7280445 ~ 7286031 (-)
c9 c9,LOC107691041 coding upstream 198717 7340212 ~ 7344137 (-)
LOC122345653 myhz2,ns:zf-e68,myhz1.1,myhc4,myhz1.2 coding upstream 277792 7419287 ~ 7429466 (-)
G33816 NA non-coding downstream 82754 7050977 ~ 7051324 (-)
G33788 NA non-coding downstream 134694 6998360 ~ 6999384 (-)
G33811 NA non-coding downstream 145306 6988026 ~ 6988772 (-)
G33810 kank1b,LOC107730999,LOC107597012,LOC107691025,LOC107587402 non-coding downstream 147859 6986000 ~ 6986219 (-)
G33809 LOC107597012,LOC107691025,LOC107730999,LOC107587402 non-coding downstream 150205 6982426 ~ 6983873 (-)
G33947 NA non-coding upstream 52481 7193976 ~ 7194213 (-)
G33985 LOC107691047,LOC107597997,LOC107723329,LOC107740940,LOC107693835,LOC107587379 non-coding upstream 192919 7334414 ~ 7336545 (-)
G33990 NA non-coding upstream 224755 7366250 ~ 7395232 (-)
LOC122345654 NA non-coding upstream 308882 7450377 ~ 7460111 (-)
LOC122345617 NA non-coding upstream 354119 7495614 ~ 7498788 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other downstream 190875 6922846 ~ 6943203 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other downstream 307896 6824171 ~ 6826182 (-)
G33175 NA other downstream 2511020 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 2940997 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 3235500 3878650 ~ 3898578 (-)
G33998 LOC108444092 other upstream 240851 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 565475 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 577070 7718565 ~ 7721758 (-)
si:ch211-117m20.4 si:ch211-117m20.4,LOC107663429,LOC107597540,LOC107717881,LOC107677428,LOC107677427 other upstream 1019382 8160877 ~ 8164026 (-)
G34372 zbtb44,LOC107597664,LOC107717865,LOC107677410,LOC107587334,LOC107722796 other upstream 1270387 8411882 ~ 8414806 (-)

Expression


Co-expression Network