ttc33 (ttc33,LOC107596169,LOC107757511,LOC107655901)


Basic Information

Item Value
gene id ttc33
gene name ttc33,LOC107596169,LOC107757511,LOC107655901
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12894584 ~ 12911763 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239054.1
GTCAAATCCAAAACATTTGTGAGTAACGCATAGATGAAACCTCAACCTGCAGTTGGTGCTGGGaatggCCTCCTTTGGCTGGAAACGTAAGGTGGGGGAAAAAGTTTCTAAGACGACAGTGCAGCAGTTTGAAAAGGACTCGGAGCAGGCAGATGATGAGGATGTGGAGAGGGAGGGAGCTGATTGGCTGCATGTCATCAAACGACGGCGAGAGGTGCTGCTGGAGGATTGTGCTGCTAAGAGCAAGAGACTAAAGGATGAAGGGATGCTGCTCGCTGAGCAGGGCAGCCAGGTCCCATGGGATAAGACCCGGCGACCAGGCGCTCGCAAGAACTGGGAGGCAGTGAAGAGGTGGGATGAGGCGATTCAACTCACACCAGACGATGCTGTGCTGTATGAGATGAAGTCAcagGTGTTGATCACCCTTCAAGAAGTGTTCCTGGCTGTGCAGTCTGCAGAGATGGCCTCCAGACTCCGCCCCCTCTGGTGGGAGGCGTGGCAAACTCTGGGCCGCGCCCAACTAAGTCTTGGCGAAGTAGAACTAGCTGTACGGTCCTTCCAAGTTGCATTGCACCTGCATCCATCTGAGCGCCACCTCTGGGAGGAAGACCTAGGCTGGGCCCTACAGCTCCGGGACCAGCAAAAAGCTCTcagtgaaagagagaaacaggaagcTGAAGCCCGAAGGCTCCTTTCGGAAGCTCCTGAGCTAAAGAGTGATTATGATTTTGAAAGCGATGAAGTGATTGAAGCTTGCACTTCCATGGCTGATAGACAGAAAAAATATGAGGACCTAAAGAAAACGGCGGTTGTTGTGGACGCGCACGGGGTTGCCAGAGAGGTGATTGTTGAAGATGACAGCGAACCCGCTTCATCCTCACAGAGTGTTTTAGTCAAGGCACGAGTGAAATAGAGGCTGGTTTTGTGTCTCCTCATCTGTGTATATGGTTTAGATTATGTATGTATTGTTAAATTTATCTGATAATCCAGGGTTCTGATTGATGTCCTCATAGTGTTAAACAAAGTTACTGTTCCCAGTGAATTTGTAAAGTGAGTATCAGATTCCAAGAAGATTTTGAAATGCTTCTGGATCATTTTCACTCAAACAAGAGCATAAATTATTTCCTTTTA
>XM_043239055.1
GGTTAGAGAGCTGAGCGTGGTCAAATCCAAAACATTTaatggCCTCCTTTGGCTGGAAACGTAAGGTGGGGGAAAAAGTTTCTAAGACGACAGTGCAGCAGTTTGAAAAGGACTCGGAGCAGGCAGATGATGAGGATGTGGAGAGGGAGGGAGCTGATTGGCTGCATGTCATCAAACGACGGCGAGAGGTGCTGCTGGAGGATTGTGCTGCTAAGAGCAAGAGACTAAAGGATGAAGGGATGCTGCTCGCTGAGCAGGGCAGCCAGGTCCCATGGGATAAGACCCGGCGACCAGGCGCTCGCAAGAACTGGGAGGCAGTGAAGAGGTGGGATGAGGCGATTCAACTCACACCAGACGATGCTGTGCTGTATGAGATGAAGTCAcagGTGTTGATCACCCTTCAAGAAGTGTTCCTGGCTGTGCAGTCTGCAGAGATGGCCTCCAGACTCCGCCCCCTCTGGTGGGAGGCGTGGCAAACTCTGGGCCGCGCCCAACTAAGTCTTGGCGAAGTAGAACTAGCTGTACGGTCCTTCCAAGTTGCATTGCACCTGCATCCATCTGAGCGCCACCTCTGGGAGGAAGACCTAGGCTGGGCCCTACAGCTCCGGGACCAGCAAAAAGCTCTcagtgaaagagagaaacaggaagcTGAAGCCCGAAGGCTCCTTTCGGAAGCTCCTGAGCTAAAGAGTGATTATGATTTTGAAAGCGATGAAGTGATTGAAGCTTGCACTTCCATGGCTGATAGACAGAAAAAATATGAGGACCTAAAGAAAACGGCGGTTGTTGTGGACGCGCACGGGGTTGCCAGAGAGGTGATTGTTGAAGATGACAGCGAACCCGCTTCATCCTCACAGAGTGTTTTAGTCAAGGCACGAGTGAAATAGAGGCTGGTTTTGTGTCTCCTCATCTGTGTATATGGTTTAGATTATGTATGTATTGTTAAATTTATCTGATAATCCAGGGTTCTGATTGATGTCCTCATAGTGTTAAACAAAGTTACTGTTCCCAGTGAATTTGTAAAGTGAGTATCAGATTCCAAGAAGATTTTGAAATGCTTCTGGATCATTTTCACTCAAACAAGAGCATAAATTATTTCCTTTTA
>XM_043239056.1
GTCAAATCCAAAACATTTGTGAGTAACGCATAGATGAAACCTCAACCTGCAGTTGGTGCTGGGaatggCCTCCTTTGGCTGGAAACGTAAGGTGGGGGAAAAAGTTTCTAAGACGACAGTGCAGCAGTTTGAAAAGGACTCGGAGCAGGCAGATGATGAGGATGTGGAGAGGGAGGGAGCTGATTGGCTGCATGTCATCAAACGACGGCGAGAGGTGCTGCTGGAGGATTGTGCTGCTAAGAGCAAGAGACTAAAGGATGAAGGGATGCTGCTCGCTGAGCAGGGCAGGAACTGGGAGGCAGTGAAGAGGTGGGATGAGGCGATTCAACTCACACCAGACGATGCTGTGCTGTATGAGATGAAGTCAcagGTGTTGATCACCCTTCAAGAAGTGTTCCTGGCTGTGCAGTCTGCAGAGATGGCCTCCAGACTCCGCCCCCTCTGGTGGGAGGCGTGGCAAACTCTGGGCCGCGCCCAACTAAGTCTTGGCGAAGTAGAACTAGCTGTACGGTCCTTCCAAGTTGCATTGCACCTGCATCCATCTGAGCGCCACCTCTGGGAGGAAGACCTAGGCTGGGCCCTACAGCTCCGGGACCAGCAAAAAGCTCTcagtgaaagagagaaacaggaagcTGAAGCCCGAAGGCTCCTTTCGGAAGCTCCTGAGCTAAAGAGTGATTATGATTTTGAAAGCGATGAAGTGATTGAAGCTTGCACTTCCATGGCTGATAGACAGAAAAAATATGAGGACCTAAAGAAAACGGCGGTTGTTGTGGACGCGCACGGGGTTGCCAGAGAGGTGATTGTTGAAGATGACAGCGAACCCGCTTCATCCTCACAGAGTGTTTTAGTCAAGGCACGAGTGAAATAGAGGCTGGTTTTGTGTCTCCTCATCTGTGTATATGGTTTAGATTATGTATGTATTGTTAAATTTATCTGATAATCCAGGGTTCTGATTGATGTCCTCATAGTGTTAAACAAAGTTACTGTTCCCAGTGAATTTGTAAAGTGAGTATCAGATTCCAAGAAGATTTTGAAATGCTTCTGGATCATTTTCACTCAAACAAGAGCATAAATTATTTCCTTTTA

Function

symbol description
ttc33 Orthologous to human TTC33 (tetratricopeptide repeat domain 33).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239054.1 True 1131 mRNA 0.49 6 12894584 12911744
XM_043239055.1 False 1105 mRNA 0.49 6 12894584 12911763
XM_043239056.1 False 1089 mRNA 0.48 5 12894584 12911744

Neighbor

gene id symbol gene type direction distance location
map1b map1b,LOC107596172,LOC107655889,LOC107757527,LOC107597920 coding downstream 30886 12844251 ~ 12863698 (-)
ptcd2 ptcd2,LOC107718650,LOC107700924,LOC107655927,LOC107757526 coding downstream 53648 12835956 ~ 12840936 (-)
isg15 LOC107654605,LOC107597356,LOC107741227,LOC107595933 coding downstream 61846 12831666 ~ 12832738 (-)
svopa svop,svopa,LOC107696058 coding downstream 74906 12808510 ~ 12819678 (-)
ssh1a ssh1,LOC107727158,LOC107597277 coding downstream 100481 12762580 ~ 12794103 (-)
eda2r LOC107598184 coding upstream 31562 12943325 ~ 12954845 (-)
ophn1 ophn1,LOC107700916,LOC107596712,LOC107596162,LOC107655920,LOC107757505 coding upstream 108583 13020346 ~ 13050778 (-)
rxfp2l rxfp2l,LOC107655900,LOC107700901,LOC107596199,LOC107757506 coding upstream 206604 13118367 ~ 13150538 (-)
efnb1 efnb1,LOC107746350,LOC107700912,LOC107548494,LOC107596159,LOC107757535,LOC107655917 coding upstream 358639 13270402 ~ 13303696 (-)
trnap-agg_13 NA coding upstream 463866 13375629 ~ 13375700 (-)
LOC122345905 NA non-coding downstream 10427 12880061 ~ 12884157 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 255207 12637190 ~ 12639377 (-)
LOC122345380 NA non-coding downstream 287646 12602216 ~ 12606938 (-)
G35949 NA non-coding downstream 356782 12532390 ~ 12537802 (-)
G35928 NA non-coding downstream 379034 12463906 ~ 12515550 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding upstream 1863 12913626 ~ 12916814 (-)
G36009 NA non-coding upstream 12980 12924743 ~ 12926462 (-)
G36012 NA non-coding upstream 21708 12933471 ~ 12933779 (-)
G36048 NA non-coding upstream 143806 13055569 ~ 13056705 (-)
G36063 NA non-coding upstream 196936 13108699 ~ 13108948 (-)
G35936 NA other downstream 388626 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 574899 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 725174 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 1078640 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 1241957 11583780 ~ 11652627 (-)
G36047 NA other upstream 142081 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 667298 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 742531 13654294 ~ 13699226 (-)
G36298 NA other upstream 805361 13717124 ~ 13718543 (-)
G36336 NA other upstream 905979 13817742 ~ 13818942 (-)

Expression


Co-expression Network