zgc:153044



Basic Information


Item Value
gene id zgc:153044
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 27434577 ~ 27436450 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043239077.1
ATGCCGGGAAGAACGGCCGGACTCGGCGGGTTTGCTCAGGTAACGGACTGTTTGTACATCGGCAACAGCAGAGCGGCAGGCGACTCTTCGCTCGTCCGTTCTCTGAACATCACTTGCGTCATCAACGCGACGCGGGACGCGAGCGGCGCGAACGTTCCTGGCGTGGAATACGTGCACGTGCCCGTCGCCGACGACCCCGAATCCGGACTCGGGGACTATTTTGACAGCGTTGCTGACGAGATACGGCGCGTCGGCGATGGAGACGGACGCGTGCTGCTTCACTGTAAGGCGGGCGTCAGTCGCTCGGCGGCGCTGTGTCTGGCGTATCTGATGAAACACCGCCGCCTGACGCTGGCGGAGGCGCACGCGCTGCTCAGGTCGCTCAGGCCCATAGTGAGACCTAACGGCGGCTTCTGGAGGCAGCTGATCGAGTACGAGCACAGATTACACGGCAAGAACACAGTCAGCATGATCGACTCGCCTGTGGGACCCGTTCCAGATCTGTATGAGAGAGAAACGAGAGGCTTGATTGCGCTTTAGGAAATGAACTACTGACCGTCATACATTTGCCTTTCCtgttatttcattcatatttgaatgattttggaCTAATGTATTACATGTTTCTCTCAAAATGTATCACGGAGTGGTGTTTCGGCCAGAAGCAACAGTTTACAGTTAAAACGTCCTTTTtagtttcttacaaacacaaaaGTTCTGGTTTCACAAGATGGTACCAGATGGATTGGAGTTGTGGATTACTTATAGATTATTGTGATGGTTTTATCAGCTCTTTAgagtctcattctgacggcacccattcactgcagggcatCCATTGGTGATGTAACTGACTTTATACATTcactaaatatcttctttggtacccgattattaaaatgatttcaaatactGCTTAAAAATGGAGGTTAGTTTTGAGTAAGCTCTAGCATCTGCCAAAGCCACctggtttgatatttttgttggccaaaaatgaaattcatatattttagtcTGGCTTTAAGTGTTCCAATATATTTTGAGCCAGTGTATTATCAAAGATTTTTGTGGTTTaaacaagaatgtttttttattaccaaCAATATCCGTCAACAAAGTTCTCTTGTAAGTTCTGAAAGGCTAAAACAAAAGTGCATCACTGTGTTTGGGGAAAATAAACTTGAATCCGAAATCAACATctcatacactgtaaaatatatcaTAAGTTGTTAATAAAGATTATTAGAGTTTATACTATGGGGCCACTGAATGCTTGAATGTGATTGGCTGACAGACATTTAAGGCGTGCGATTATTTTCAAGGAGAACGTAATTCCAGGCAGCTCTTTAACCgcattacaaacaaaaactcgactcttctgtagttcTATTTTGTAGTAAGGccagcagaaaatgaaaagttgtgattttctaggcttatgactaggaactatactatatatttgCTGGCGTACCATTGCttgtggaaaatagtccccagcttgcAAGACAAGCTCCTTGTGCAAGAGGGTCTGGGTTTTTTCAGATGATGCTCTGATGATTTTATCATTGACATTAACTGAAGAACAGCTTGTTTTCTCACAAGCGAGGAAGCAACGTTGCTTGAGATGTGGAAGAAATAATCCTACTCACAATAGGTTAAGTACAAAAACCTGACAAATACCTTGAAATCAACATAATTGGGAGAAAGGTTGATTCATAATACCTGTTTGTTAAAGCATGTATTAtcttattaaattacatatttagcatgtttttgtgtttggaatgtgtgtatttccagcaatattttattagactTGCACACCCTGTACGTGAATATTTGATATGTGGAAATAAAGTGACTGGCACGAA

Function


NR:

description
Dual specificity protein phosphatase 18

GO:

id name namespace
GO:0035335 peptidyl-tyrosine dephosphorylation biological_process
GO:0017017 MAP kinase tyrosine/serine/threonine phosphatase activity molecular_function
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K14165 K14165; atypical dual specificity phosphatase

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043239077.1 True 1874 mRNA 0.43 1 27434577 27436450
Loading

Neighbor


gene id symbol gene type direction distance location
tmem116 si:ch211-157p22.10,LOC107740032,LOC107548513,LOC107556047,LOC107728188,LOC107662092,LOC107702969 coding downstream 2961 27421756 ~ 27431616 (-)
psat1 psat1,LOC107548526,LOC107556046 coding downstream 13573 27415308 ~ 27421004 (-)
tut7 zcchc6,LOC107740015,LOC107662083,LOC107702897,LOC107728196,LOC107556044,LOC107556045 coding downstream 19578 27399413 ~ 27414999 (-)
LOC122345946 LOC107740017,LOC107662084,LOC107702896,LOC107548503 coding downstream 40950 27391394 ~ 27393627 (-)
smtnb smtn,LOC107739992,LOC107662053,LOC107702966 coding downstream 44579 27343490 ~ 27389998 (-)
kiss1rb kiss1rb,LOC107728362,LOC107702921 coding upstream 2631 27439081 ~ 27445470 (-)
mapkapk5 mapkapk5,LOC107702970,LOC107662046,LOC107548527,LOC107556043 coding upstream 9089 27445539 ~ 27457103 (-)
LOC122345447 aldh2.2,aldh2.1,aldh2,LOC107662045,LOC106578507 coding upstream 21340 27457790 ~ 27467414 (-)
eif2b1 eif2b1,LOC107675950,LOC107728130,LOC107702972 coding upstream 74423 27510873 ~ 27514550 (-)
dguok LOC107675955,LOC107740006 coding upstream 82315 27518765 ~ 27522039 (-)
G39893 NA non-coding downstream 148383 27285182 ~ 27286194 (-)
G39888 NA non-coding downstream 167348 27265289 ~ 27267229 (-)
G39872 NA non-coding downstream 200415 27232658 ~ 27234162 (-)
G39870 NA non-coding downstream 209015 27224887 ~ 27225562 (-)
G39857 NA non-coding downstream 245355 27188850 ~ 27189222 (-)
G39935 NA non-coding upstream 102038 27538488 ~ 27538861 (-)
G39936 NA non-coding upstream 102490 27538940 ~ 27539327 (-)
G39951 rgs3a,LOC107702900,LOC107728018,LOC107556028,LOC107558862,LOC107693410 non-coding upstream 214000 27650450 ~ 27650827 (-)
G39964 NA non-coding upstream 312010 27748460 ~ 27789829 (-)
G40021 NA non-coding upstream 459193 27895643 ~ 27895961 (-)
isca1 isca1,LOC107702919,LOC107662049 other downstream 35836 27382921 ~ 27398741 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other downstream 327192 27099815 ~ 27107385 (-)
LOC122344921 NA other downstream 1865891 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 2152291 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 2675909 24754202 ~ 24758668 (-)
LOC122344874 NA other upstream 449591 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 819378 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 1887532 29323982 ~ 29326115 (-)
G40182 brinp1,LOC107715673,LOC107674904 other upstream 2024135 29460585 ~ 29490204 (-)
eng LOC107562335,LOC107704777,LOC107741503 other upstream 2178269 29614719 ~ 29655061 (-)

Expression


zgc:153044 Expression in all Baseline Samples

Bar chart with 10 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 30.
End of interactive chart.

zgc:153044 Expression in each Bioproject

Bar chart with 2 bars.
zgc:153044 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 250.
End of interactive chart.

Co-expression Network