CI01000004_15881212_15881809


Basic Information

Item Value
gene id CI01000004_15881212_15881809
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 15880140 ~ 15883692 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_15881212_15881809.mRNA
AAATACATATTTTACAGTTCTGTGGTATGAAAATGTATAAATAATTTATGTATGTATATATATAACAATTTAAAGGGATAGCCCAAAAATGATCCTATACTTTACTCACCCTCAAGCCATCCTAGGTGTATATGATTATTTTCTTTCAGAAAAAAACAATCGGATATACAGAATCTCACAGAAGTGAGTACACCCCTCACATTTTTGTAAATATTATATCTTTTTATGTGACAACACTGAAGAAATGACACTTTGCTACAATGTAAAGCAGTGAGTTTACAGCTTGTATAACAGTGTAAATTTGCTGTCCCCTCAAAATAACTCAACACACAGCCATTAATGTCTAAACCACTGGCCACAAAAGTGAGTAGACCCCTAAGTGAAAATGTCCAAATTGGACCCAATGAGCCATTTTCTCTCCCCGGTGTCATGTGACTTGTTAGTGTTACAAGGTCTCAGGTGTGAATGGGGAGCAGGTGTGTTAAATTTGGTGTTATCGCTCTCACTCTCTCATACTGGTCACTAGAAGTTCAACATGGCACCTCATGGCAAAGAACTCTGAGGACCTGAAAAAAAGAATTGTTGCTCTACATAAAAACACCAAAGAAGTTGGTCGACCAGTTGGTCGACCCTATTGAGCATCTGTGGGGCATCCTCAAACGGAAGGTGGAGGAGCGCAAGGTCTCTAACATCCACCAGCTCCGTGATGTCGTCATGGAGGAGTGGAAGAGGACTCCAGTGGCAACCTATGAAGCTCTGATGAACTCCATGCCCAAGAGGGTTAAGGCAGTGCTGGAAAATAATGGTGGCCACATAAAATATTGACACTTTGGGCCCAATTTGGACATTTTCACTTAGGGGTGTACTCACTTTTGTGGCCAGCGGTTTAGACATTAATGGCTGTGTGTTGAGTTATTTTGAGGGGACAGCAAATTTACACTGTTATACAAGCTGTACACTCACTACTTTACATTGTAGCAAAGTGTCATCACAGTGTTGTCACATGAAAAGATATAATATAATATTTACAAAAATGTGAGGGGTGTACTCACTTCTGTGAGATACTGTATATATTTAAAAATATTCTGGTTCTTCCAAGCTTTATAATGGCAGTGAATGGGGGACGAGATTTTGAAGCCCAAAAAAAGCGCATTCATCCATCATAAAAGTAATAGATATGACTCCAGGGGGTTAATAAAGGCCTTCTGAAGCGAAGCGATGGGTTTTTGTAAGAAAAATATCCATATTTAAAACATTATTATCTATAATACCTGGCTTATCGATTTGCAGCGGAAGAGTAACCCCTGACCCGACACATGACACAATAATGAACGCTGAAGCGCAGAGGATAGAGCAAAACAAAACACCGGTCATGAGTTAGAAGTCTAAAATGAGAATTTTTAAAAAGAAATGTCAGAGGATTTCGATAAAAGAGAAGAAGAGCTTGAGTTTGTCGCACAGCCCTATTTGTTTAAACCACGAGAGGCGTCTAAGCTTACGATACTCCTACATCCTAGTCATACATCCCGTCATGGGTTACTCTTGTGGCTTAAGTCGACCTGCGCAGTAAGGTCTTCTGCCAGAAGCTAGTTATTTTAGTTTATAAAGTTTTAAATATGGATATTTGTCTTACAAATACACATCGCTTCGCTTTAGAAGTCCTTTATTAACCCCCTGGAGCTGTGTGGATTACTTTTATGATGGATGGATGCGCTTTTTGGGGGCTTCAAAATCGCGCCCCCAATTCACTAACATTATAAAGCTTGGAAGAGCCAGAATATTTTTAAATATATCTCTGATTGTGTTGAGGGTGAGTAAATCATGGGATAATTTTCATTTTGGGGTGTACTAACCCTTTAACATGATTTAAGACCTGAATTGGGATGCAGTGGCTTCAAAAATGTAAGAAATATTGCAGTTCCTTTTACTATGCCATTAATGTCAATATTTGCGTGCCATGTGCCCCTCAGCCGCCCAGGAGAAACCGGCGGACAAAGCGGGGAAGCCCCCTACGCAAGAACCCGAAGAAGAGATCGACATTGATCTGGAGGCGCCAGAGACAGAAAAAGCAGCTTTGGCAATACAGAATCAGTTTAGACGCTTCCAGAAGAAAAAGAAGTAGAAAAGGGAAGCCTGAACGAGAGGAATCGGTGGACAAAAACGCCTTCCACAATATTCACCATGAAAAGAGAATTAATAAGGAAGAGACAGAGGTGGTGGACATTAATATAGGAACGTCAGTTACTGACATGTGCAACACACATCTGTCATTTAATGTATTTAGTATCATTGATGCAACAGAATAAATGTAAGTGATATAAACTTAAGAATTCAAAGGGCAGTAAATGACCAAATGTTACAGTAAAACATGTTGGTGTGAATCAGTATTATAGATACGAAGTAGCTTAGTTGTAAATCTATTCTTAGAGTTAGCTGTTAATTGTTTTTTTTCTTTAAAGTGACAAGTGATTAAAAAAATGAAGAAATCTTTATATGGACAACAGACCAAATAATCATAATTTGATAACAGACAAAAATATATAATACCTTAACATTCTCAGAAAAATTAGCAATAGCAATATCTTGCATATTTATGCATTTTGGACAGGGATTTAAATTGAATAGCTTGTTATTTTTAAAATTAGCCCTAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_15881212_15881809.mRNA False 2655 mRNA 0.38 2 15880863 15883692

Neighbor

gene id symbol gene type direction distance location
CI01000004_15836936_15841048 NA coding downstream 39815 15836462 ~ 15841829 (-)
CI01000004_15832789_15836192 NA coding downstream 44659 15832573 ~ 15836231 (-)
CI01000004_15827737_15828938 NA coding downstream 51903 15827668 ~ 15828960 (-)
CI01000004_15760841_15761919 HBL4 coding downstream 118876 15760790 ~ 15761987 (-)
CI01000004_15751774_15753519 NA coding downstream 125466 15751733 ~ 15755397 (-)
CI01000004_15911104_15915972 NA coding upstream 27244 15910936 ~ 15916019 (-)
CI01000004_15922924_15923872 NA coding upstream 39034 15922726 ~ 15923872 (-)
CI01000004_15956601_15962195 TOX4 coding upstream 72308 15956000 ~ 15962930 (-)
CI01000004_15965178_15990162 CHD8 coding upstream 81428 15965120 ~ 15990175 (-)
CI01000004_15991836_15995032 CBLN12, CBLN3, CBLN1 coding upstream 107948 15991640 ~ 15995184 (-)
G34799 NA non-coding downstream 3113 15877268 ~ 15877750 (-)
G34794 NA non-coding downstream 28995 15851264 ~ 15851868 (-)
G34793 NA non-coding downstream 31037 15849583 ~ 15849826 (-)
G34792 NA non-coding downstream 32935 15846967 ~ 15847928 (-)
G34790 NA non-coding downstream 37999 15842301 ~ 15842864 (-)
G34801 NA non-coding upstream 3445 15887137 ~ 15887413 (-)
G34616 NA non-coding upstream 23221 15906913 ~ 15910671 (-)
G34811 NA non-coding upstream 42318 15926010 ~ 15926261 (-)
G34814 NA non-coding upstream 44751 15928443 ~ 15928750 (-)
G34583 NA non-coding upstream 46683 15930375 ~ 15944664 (-)
G34796 NA other downstream 17115 15860613 ~ 15863748 (-)
G34633 NA other downstream 92966 15787386 ~ 15787897 (-)
G34718 NA other downstream 599214 15281016 ~ 15281649 (-)
CI01000004_15086759_15087492 NA other downstream 790505 15086671 ~ 15087575 (-)
G34934 NA other upstream 518053 16401745 ~ 16421506 (-)
G34982 NA other upstream 619033 16502725 ~ 16515974 (-)
G34995 NA other upstream 645750 16529442 ~ 16533008 (-)
G34999 NA other upstream 653503 16537195 ~ 16541278 (-)
CI01000004_16596848_16599652 NA other upstream 694975 16596476 ~ 16601205 (-)

Expression


Co-expression Network