plscr3a (plscr3a,LOC107744496,LOC107599978,LOC107687706,LOC107592298,LOC107726366)


Basic Information

Item Value
gene id plscr3a
gene name plscr3a,LOC107744496,LOC107599978,LOC107687706,LOC107592298,LOC107726366
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10922870 ~ 10926030 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239139.1
AAGACGTTCACGTATGCACACTTTCCCCCAGTCACATGCTGCAGTAGACGCGCTTGACGCTTCACTCGATCCGCTGTAACGCTGTGCTGGCAATTACTTCAACAATCAGTGAGAAAGCCTTCAGCTGTTTAGTTCAACATGTCTAACCCAGCGGCTGTCCCGCCTGGTTTGGAGTACCTTACACAGATTGACCAGATATTGGTCCATCAAAAGATTGAGCTCCTTGAAGCCATTATTGGCTTTGAGACTAATAACCAATATGAGATTAAGAACAGCATGGGTCAAAAGATCTTCCATGCTAAAGAAAACACTGACTGCTGCACACGGAAtatatgtggtcctctgaggaGTTTTGAGATGCAGATAAAAGATAATTTTGATCAGGAAGTAATTCACTTAAGCAGGCCTTACCGCTGCACGTCCTGCTGTTTCCCCTGCTGCCTTCAAGAGATGGAGGTACAGGCTCCACCAGGGAATACAATAGGTTACATCAAGCAAAACTGGCACATGTTTAAGCCCAAGTTCTCCATCTATGACATGTCCCAAACAAAGGTGCTGTCCATCGAAGGGCCTTTTTGTGCCATCAGCTGCTGCGGGGATGTGGATTTTGACATTACCGGTAAGGATGGGCAGTCTGTAGGTCGCATCAGTAAACAGTGGACCGGCTTCATCAAAGAGGCACTGACTGATGCAGATAATTTTGGCATTAACTTTCCAATGGACTTGGATGTGAGGATGAAAGCAGTTCTGCTTGGAGCATGTTTCCTTATAGACTTCATGTTCTTTGAGCAGACCGGTGACTCAGGACAGCGTTGCAGTGTGTTTGGCTAGTGGTTCTtgcttaaattttaatttttttttttttttggaatattcataaataactacatttacCACTTGTATGTAGCCTACTTTCTGTTTTGCCACTATAAAAGCATTTGACAACATAGCTGTAACCCAGtctaaacaacattttcatgttttctctCATGATTTTCTCTTTCGTAAGAATATTAAAGAACTAATTTCCCTTCTAAAACATAA

Function

symbol description
plscr3a Predicted to enable phospholipid scramblase activity. Predicted to be involved in plasma membrane phospholipid scrambling. Predicted to be active in plasma membrane. Orthologous to human PLSCR3 (phospholipid scramblase 3).

NR:

description
phospholipid scramblase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239139.1 True 1044 mRNA 0.42 7 10922870 10926030

Neighbor

gene id symbol gene type direction distance location
phf23a phf23a,LOC107599938,LOC107744450,LOC107687682,LOC107726379,LOC107592297,LOC107672758 coding upstream 88 10918773 ~ 10922782 (+)
si:ch211-137i24.12 LOC107744495,LOC107687707,LOC107599977 coding upstream 14513 10904934 ~ 10908357 (+)
znf703 znf703,LOC107599934,LOC107687685,LOC107744445,LOC107726392,LOC107672788,LOC107592299 coding upstream 48778 10870338 ~ 10874092 (+)
tia1l tia1l,LOC107726385,LOC107592301,LOC107672787,LOC107599933,LOC107744444 coding upstream 154239 10762439 ~ 10768631 (+)
trmt2a trmt2a,LOC107687689,LOC107672731 coding upstream 168606 10749401 ~ 10754264 (+)
eif4a1b eif4a1b,if4a1,LOC107599941,LOC107592294,LOC107726387,LOC107687701,LOC108443969,LOC106560692 coding downstream 8515 10934545 ~ 10941643 (+)
sox19a sox19a,LOC107687705,LOC107744453,LOC107726363,LOC107672743,LOC107599979,LOC107592398 coding downstream 20085 10946115 ~ 10948415 (+)
tm4sf21a si:ch211-137i24.10,LOC107687679,LOC107744498,LOC107672738,LOC107726377,LOC107599980 coding downstream 34310 10960340 ~ 10963604 (+)
mrps31 NA coding downstream 43472 10969502 ~ 10972314 (+)
capga capga,LOC107599981,LOC107687675,LOC107744500,LOC107726365,LOC107592395,LOC107672725 coding downstream 55557 10981587 ~ 10986048 (+)
G35202 NA non-coding upstream 84503 10838012 ~ 10838367 (+)
G35197 NA non-coding upstream 106569 10813457 ~ 10816301 (+)
G35081 NA non-coding upstream 375245 10547221 ~ 10547625 (+)
G35043 NA non-coding upstream 589062 10333219 ~ 10333808 (+)
G35042 NA non-coding upstream 592548 10329889 ~ 10330322 (+)
G35229 NA non-coding downstream 19026 10945056 ~ 11019192 (+)
G35267 NA non-coding downstream 261224 11187254 ~ 11187694 (+)
G35274 kat5,LOC106563454,LOC107597226 non-coding downstream 278470 11204500 ~ 11209405 (+)
G35304 prps1a,LOC103031347,LOC107733231,LOC107597240,LOC107672505 non-coding downstream 456640 11382670 ~ 11387170 (+)
G35309 NA non-coding downstream 479498 11405528 ~ 11405761 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other upstream 186811 10717531 ~ 10736059 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other upstream 783137 10064217 ~ 10139733 (+)
si:ch211-102c2.4 NA other upstream 1123512 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 2051352 8864202 ~ 8871518 (+)
snx19a snx19a,LOC107597619,LOC107681657 other upstream 2617424 8289720 ~ 8305446 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other downstream 793 10926823 ~ 10933753 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 120449 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 210193 11136223 ~ 11150225 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 340612 11266642 ~ 11303431 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other downstream 712486 11638516 ~ 11652683 (+)

Expression


Co-expression Network