anapc2 (anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355)


Basic Information

Item Value
gene id anapc2
gene name anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24587724 ~ 24594116 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239193.1
TCATCAGCGCGCGACAAGCGTTTGAAGAAAAGCGCTATAATTTGTAGACGTAAAAGCTAAACTGGATCTTTTATATAGCTTTGACCATATGATTTTGGACAAAACAGACAcggattaaaatgaaaatccacGTACAGTAACCGCGACGAACATTATTCTTGTATCCCAGGATATATGACTATTGTTTACAGCCTAAAAGAGGAATGAACGAGGTGCAGTCAATGCCGCAGGGACTTTCAGCAGCCTGGGACACGGTGACATCTGCACTGGTGTCTCCTGTGCCGCCAAATGCTTCGACCGATGATGTTCTCTCTGAGGCCTTGGCCTTGCTGGGTGTTCATGGACTGGGTCAGTATGTGGAAGGATGGCTGCTGGAGACCCTGCAGGTGCGTCTGACTACTTCTGTGGCTCCAGAGTTCTGGACGGGGCTCAAGCAGCCAGAGGGGGATTCACAGGAGAGGGACAGGGCAAAGGCTTTACTAGAAGCTTTCAGAAACCTTCTCCAGGAGCTGCAACCTTTCCTTGATGGTCTTGAGAGACTGGGTTCGTGGCAGGATGAGAGCCGTGGGGGTCTGTCCGGTCCCGGGGCCCGGGGTCTCACAGAGAGGGCTTTCTCTGTCATTCGTGCCATTCTCCTGTTCTCCCCTTCACCTGTGCTGCAGGAGCGCGTGTTGGAGTTTTACAGCCGCACGTTCTCCGTGCACATGAGTCAGGCAGGGGAAGCTGTGGAGGCTGAGGAGGGCGCCAGCGAGCACGATGAAGGTGGTTTGTGCCCAGGCTGTGCCGTCCTCCCTCACCTGTGTTGGTGTCAGGAAGCTCTAGAGCAGCTTCAAGAGCTCAGCCACATACTCTCCACACTACAGCTGTTGGAGCGTGTGAGCTCAGAGGCTGTGACCAGCATCCTGCACCAGCTGATAGAGCAGAGGATGGAGCAGCGCTGCAGGGGAGAATACGAGAGCTCTTTCCTGACAGACTTTGATGATTGGTTGGGGCAGGTTTTGGGATGGCTCAGCAGGGTGTTTGCCAGTAAGGTGGAAGATGTGGGCAGTGATGGCACACCTACGGATAGCACAAGGGGTCAGCCGGCCAACGCTCTCCTCCAGCGCTGGCACTGTCACATGCACCAGTTCTTCTGCCGTATTTATGTGAACATGAGGATCGAGGAGCTCTTCAGCATCATACGAGATTTTCCAGAGTCTATTCCTGCCATCGAGGATCTTAAGTTCTGCCTGGAACGGACCAATCAGAGACAGCAGCTTCTTGCCTCCCTCAAATCGGCCTTTGAAACACGACTGCTGCATCCAGgaGTCCACACATCTGACATCATCACGGTTTACATCTCTGCCATCAAAGCTCTGAGGGAGCTTGACCCTTCTATGGTGATCTTGCAAGTGGCCTGCCAACCCATTCGCAAATATCTCAGAACGCGCGAGGACACTGTGCGTCAAATAGTGGGCAGTTTGACAGGAGACGCAGAGGGTTGCACTGATCTAGCCAATGAGCTCTCTCGAGCTGACCCTGTTACCTTGGAGACACAGGATAGTGAAGATGAGGGGAGCGATCCAGAGGACTGGACCCCAGATCCCACTGATGCTCTCACAGaTAAAACTGGCTCTAAACGGCGCTCTTCCGACATCATCAGTCTGCTGGTGAGCATTTATGGAAGCAAAGAGATCTTCATTAATGAGTACAAGACTGTTCTGGCTGACCGACTTTTGCATCAGCTCAACTACAACACAGCCAGAGAGATTCGTAACGTGGAGCTTCTGAAACTGAGGTTTGGAGAATCCCACATGCACTACTGTGAGGTGATGTTAAAGGATGTAGCAGACTCTCGGCGGATCAATTCCAATATTCGCGAGGAAGAGAGTCGTCTTCCTGTAGAGGAGCAGTCAACGCTACCGCTGTCTTCCATGATCATCTCATCTGAGTTCTGGCCCCAGCTGAAGGAGGAGAAGATGGAACTGCCTCCGGTCATCTCTAAAGCCATGGAGGATTACACGCACCGCTTTGAAAAACTTAAGgCCATGAGGACTCTGAGGTGGAAGCCTCACTTGGGTTCTGTTACGCTGGATGTGGAGCTGGAGGACAGAACCATCGCAAACCTCACCGTGACTCCTATCCATGCTGCCATCATTTTACACTTCCAGGACAAAGGCACGTGGACGTTGGAAGAGCTGAGTGGTGTCCTAGGCGTGCCACAGGAGATGGTGCGCAGGAAGTTAGCTCTGTGGCAGCAGCAGGGCGTGCTGCGAGAGGAAGCCGGAGGTCGATACACTGTGCAGGAGACAAGCTCTTGCAGAGAGAGATCCGACAGGAGCGTCATGCTCATAGACAGTGATGAAGAGGGAGACTCCAATACCGCAACGCAGTCGGAGCAAAGAGAAGAGAAACTACAGCTGTTCTGGGCCTACATTCAGGCCATGCTGACTAACCTGGAGAGCATGACTTTGGAGAGGATACACTCCATGCTGCGAATGTTTGTGGCCGCCGGATCTGGGGTTACTGAGATGGATGTGAACGAGCTGCAGGCGTTCCTGCAGAAGAAAGTCAGGGCCCACCAGCTTATTGTGTCCACTGGTGTCTACAGGCTACCCAAGACCACTCAGTAGTGGAGAtcagaaaaacaataatgaactatttcatcatttgtatttaaaaaaaaaaaaggtttgtttattgcgcaaataataaaaagacaacacTTTTTGTAATCGCATGTTGCAGTCTTTATGACATGTAAAATACAGTGAtggggaaaatgttttttttgtatttcacaacAAATAGTTTCAGATTTTTATCCTGATGAAACACagcttttattcattattttgtattaag
>XR_006250980.1
TCATCAGCGCGCGACAAGCGTTTGAAGAAAAGCGCTATAATTTGTAGACGTAAAAGCTAAACTGGATCTTTTATATAGCTTTGACCATATGATTTTGGACAAAACAGACAcggattaaaatgaaaatccacGTACAGTAACCGCGACGAACATTATTCTTGTATCCCAGGATATATGACTATTGTTTACAGCCTAAAAGAGGAATGAACGAGGTGCAGTCAATGCCGCAGGGACTTTCAGCAGCCTGGGACACGGTGACATCTGCACTGGTGTCTCCTGTGCCGCCAAATGCTTCGACCGATGATGTTCTCTCTGAGGCCTTGGCCTTGCTGGGTGTTCATGGACTGGGTCAGTATGTGGAAGGATGGCTGCTGGAGACCCTGCAGGTGCGTCTGACTACTTCTGTGGCTCCAGAGTTCTGGACGGGGCTCAAGCAGCCAGAGGGGGATTCACAGGAGAGGGACAGGGCAAAGGCTTTACTAGAAGCTTTCAGAAACCTTCTCCAGGAGCTGCAACCTTTCCTTGATGGTCTTGAGAGACTGGGTTCGTGGCAGGATGAGAGCCGTGGGGGTCTGTCCGGTCCCGGGGCCCGGGGTCTCACAGAGAGGGCTTTCTCTGTCATTCGTGCCATTCTCCTGTTCTCCCCTTCACCTGTGCTGCAGGAGCGCGTGTTGGAGTTTTACAGCCGCACGTTCTCCGTGCACATGAGTCAGGCAGGGGAAGCTGTGGAGGCTGAGGAGGGCGCCAGCGAGCACGATGAAGGTGGTTTGTGCCCAGGCTGTGCCGTCCTCCCTCACCTGTGTTGGTGTCAGGAAGCTCTAGAGCAGCTTCAAGAGCTCAGCCACATACTCTCCACACTACAGCTGTTGGAGCGTGTGAGCTCAGAGGCTGTGACCAGCATCCTGCACCAGCTGATAGAGCAGAGGATGGAGCAGCGCTGCAGGGGAGAATACGAGAGCTCTTTCCTGACAGACTTTGATGATTGGTTGGGGCAGGTTTTGGGATGGCTCAGCAGGGTGTTTGCCAGTAAGGTGGAAGATGTGGGCAGTGATGGCACACCTACGGATAGCACAAGGGGTCAGCCGGCCAACGCTCTCCTCCAGCGCTGGCACTGTCACATGCACCAGTTCTTCTGCCGTATTTATGTGAACATGAGGATCGAGGAGCTCTTCAGCATCATACGAGATTTTCCAGAGTCTATTCCTGCCATCGAGGATCTTAAGTTCTGCCTGGAACGGACCAATCAGAGACAGCAGCTTCTTGCCTCCCTCAAATCGGCCTTTGAAACACGACTGCTGCATCCAGgaGTCCACACATCTGACATCATCACGGTTTACATCTCTGCCATCAAAGCTCTGAGGGAGCTTGACCCTTCTATGGTGATCTTGCAAGTGGCCTGCCAACCCATTCGCAAATATCTCAGAACGCGCGAGGACACTGTGCGTCAAATAGTGGGCAGTTTGACAGGAGACGCAGAGGGTTGCACTGATCTAGCCAATGAGCTCTCTCGAGCTGACCCTGTTACCTTGGAGACACAGGATAGTGAAGATGAGGGGAGCGATCCAGAGGACTGGACCCCAGATCCCACTGATGCTCTCACAGaTAAAACTGGCTCTAAACGGCGCTCTTCCGACATCATCAGTCTGCTGGTGAGCATTTATGGAAGCAAAGAGATCTTCATTAATGAGTACAAGACTGTTCTGGCTGACCGACTTTTGCATCAGCTCAACTACAACACAGCCAGAGAGATTCGTAACGTGGAGCTTCTGAAACTGAGGTTTGGAGAATCCCACATGCACTACTGTGAGGTGATGTTAAAGGATGTAGCAGACTCTCGGCGGATCAATTCCAATATTCGCGAGGAAGAGAGTCGTCTTCCTGTAGAGGAGCAGTCAACGCTACCGCTGTCTTCCATGATCATCTCATCTGAGTTCTGGCCCCAGCTGAAGGAGGAGAAGATGGAACTGCCTCCGGTCATCTCTAAAGCCATGGAGGATTACACGCACCGCTTTGAAAAACTTAAGgCCATGAGGACTCTGAGGTGGAAGCCTCACTTGGGTTCTGTTACGCTGGATGTGGAGCTGGAGGACAGAACCATCGCAAACCTCACCGTGACTCCTATCCATGCTGCCATCATTTTACACTTCCAGGACAAAGGTTTTGACCTCCAGCGTTATGAGCATGTGAAATACCCAGTGTGCCACAGACCTCACTACCTGTTGTCCTTCATTAGGCACGTGGACGTTGGAAGAGCTGAGTGGTGTCCTAGGCGTGCCACAGGAGATGGTGCGCAGGAAGTTAGCTCTGTGGCAGCAGCAGGGCGTGCTGCGAGAGGAAGCCGGAGGTCGATACACTGTGCAGGAGACAAGCTCTTGCAGAGAGAGATCCGACAGGAGCGTCATGCTCATAGACAGTGATGAAGAGGGAGACTCCAATACCGCAACGCAGTCGGAGCAAAGAGAAGAGAAACTACAGCTGTTCTGGGCCTACATTCAGGCCATGCTGACTAACCTGGAGAGCATGACTTTGGAGAGGATACACTCCATGCTGCGAATGTTTGTGGCCGCCGGATCTGGGGTTACTGAGATGGATGTGAACGAGCTGCAGGCGTTCCTG

Function

symbol description
anapc2 Predicted to enable ubiquitin protein ligase binding activity. Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within cell division and ubiquitin-dependent protein catabolic process. Predicted to be part of anaphase-promoting complex. Orthologous to human ANAPC2 (anaphase promoting complex subunit 2).

NR:

description
anaphase-promoting complex subunit 2-like

GO:

id name namespace
GO:0006511 ubiquitin-dependent protein catabolic process biological_process
GO:0031461 cullin-RING ubiquitin ligase complex cellular_component
GO:0031625 ubiquitin protein ligase binding molecular_function

KEGG:

id description
K03349 APC2, ANAPC2; anaphase-promoting complex subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239193.1 True 2844 mRNA 0.51 14 24587724 24594116
XR_006250980.1 False 2616 transcript 0.53 14 24588028 24594116

Neighbor

gene id symbol gene type direction distance location
npr2 npr2,LOC107559735,LOC107746469,LOC107730344,LOC107684353,LOC107595992,LOC107683705,LOC108260050 coding downstream 2589 24546148 ~ 24585135 (-)
pmchl LOC107683707,LOC107575048,LOC107738923,LOC107596031,LOC107730319,LOC107684382 coding downstream 56761 24530408 ~ 24530963 (-)
cd180 LOC107742410,LOC107681052,LOC107600612 coding downstream 178211 24406995 ~ 24409513 (-)
LOC122345313 LOC107681049,LOC107706956,LOC107574963 coding downstream 269893 24298530 ~ 24317831 (-)
LOC122345102 LOC107691787,LOC107600611,LOC107684345,LOC107595997,LOC107684346 coding downstream 323006 24253333 ~ 24264718 (-)
tprn tprn,LOC107559738,LOC107746472,LOC107684357,LOC107595990,LOC107730352,LOC107697983,LOC107734963 coding upstream 2971 24597087 ~ 24613743 (-)
tmem203 tmem203,LOC107559731,LOC107697982,LOC107684383,LOC107730349,LOC107580151 coding upstream 21242 24615358 ~ 24616916 (-)
traf2b traf2,LOC107697985,LOC107746475,LOC107567702 coding upstream 39186 24633302 ~ 24652541 (-)
bspry bspry,LOC107746480,LOC107575043,LOC107730316,LOC107684387,LOC107596025 coding upstream 62711 24656827 ~ 24661600 (-)
rangrf rangrf coding upstream 91230 24685346 ~ 24690190 (-)
G39298 LOC107683704,LOC107738921,LOC107600589,LOC107595993,LOC107730350 non-coding downstream 65703 24521562 ~ 24522021 (-)
G39296 NA non-coding downstream 67337 24519667 ~ 24520387 (-)
G39274 NA non-coding downstream 96932 24414900 ~ 24490792 (-)
G39285 LOC107738919,LOC107681053,LOC107600587,LOC107595995 non-coding downstream 108669 24470611 ~ 24479055 (-)
G39137 NA non-coding downstream 306835 24277474 ~ 24280889 (-)
LOC122345299 NA non-coding upstream 29443 24623559 ~ 24624878 (-)
G39337 NA non-coding upstream 136096 24730212 ~ 24730391 (-)
G39341 NA non-coding upstream 137523 24731639 ~ 24732075 (-)
G39347 NA non-coding upstream 158966 24753082 ~ 24753322 (-)
G39356 NA non-coding upstream 246629 24840745 ~ 24846363 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 310420 24265464 ~ 24277304 (-)
G39113 NA other downstream 387228 24197705 ~ 24200496 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other downstream 589985 23979664 ~ 23997739 (-)
G38973 NA other downstream 700044 23887303 ~ 23887680 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other downstream 831136 23751880 ~ 23756588 (-)
naa38 naa38 other upstream 152556 24746672 ~ 24748610 (-)
LOC122345923 NA other upstream 160086 24754202 ~ 24758668 (-)
G39413 LOC102215562 other upstream 687770 25281886 ~ 25282286 (-)
LOC122344921 NA other upstream 967858 25561974 ~ 25568686 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other upstream 2505699 27099815 ~ 27107385 (-)

Expression


Co-expression Network