LOC122345250 (cyb561a3a,LOC107673362,LOC107721551,LOC107595000,LOC107659288)


Basic Information

Item Value
gene id LOC122345250
gene name cyb561a3a,LOC107673362,LOC107721551,LOC107595000,LOC107659288
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 9566515 ~ 9569294 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239200.1
GGTTGTGGTCACTACACTTCCCATGCCACCTTGCGGGTAAACAGGAACTTATCATGTCGGCAAGCAGGGCTGCTTTTCTCAAAAACATAATGAAATCGAAAATCATGATGGGGAATCGTGGAAAGAGGAACTGagattaacaaaaaaacccaaaaacgcTGTCACGAGGCTGTTTGAAATTCGTAAAACTTCTGATTAAGGTACTGTACATTCAGAAGTGCTGCTCTTCTAAAAACGGCTGTTCTGTTAAAAACTAAACCTGAAAATCACTTGATTATTTGATTTTGAGCAATTTCTTTATAAGCACTCACAGGATGAGAGGGATTGTTACATTTTACCTAACCTATCTGCTGTGCCTGGTGTTGGGGGTCAGCTGTGTGGCATTGGTAGCTCACTGGAATTACAGCTATAGAGGTGGATTTGCATGGGATGGCTCAGCCAAACAGTTCAACTGGCACCCGGTCTTCATGGTCACTGGCATGGTGGTGCTTTATGGGAACGCGGCCGTAGTGTACCGTATTCCTCTGACGTGGGGTCACAATAAGCTCCCCTGGAAGCTGTTACATGCTGGGCTTCTGCtcctttctttcattctgtctgttATCGGGCTTTGTGCTGTGTTCGAGTACCACAATGCAAACCACACAGCCAACCTCTATTCCCTCCACAGCTGGGTGGGGATTTGTACCGCTGCGCTTTTTGCTGCACAGTGGGTAATGGGTTTCACGGCATTTCTTTTACCCTGTACTCCGATGACGGCACGTGCTCTTGTAAAGCCAGCTCATGTTTGGATGGGAGGAATCATCTTGGTACTGGGCATTGTGTCTTGCATCTCAGGGATCAACGAAAAACTCTTTTTTGCACTGAAGGGAAACACCAATGGGACGCTGCCGTATTCCGCATTACCACCAGAGGCAATAACTGCAAATGCACTGGGAGTCATCATTGTTGCATTTGGATTGGTTGTTTTGAAAATCTTATCCAATCAGATATGGCAACGTCCTGAGCCAGGCTATGAAGAGGGAGTTTATCAGCCATTTGGGTATGATGGAAGCTAACAAACCAAAGCTGAAATGactgaaatcaaaatattatcTGCACTCTTCGAAGGAATCAAAGTGCCCTGATGTTACAGCAATTCCTATTCCTAATTATACAGAGCGCTGCAGTTTACTGCAAAACTTCTCTTCATTATGTTTGATGTGATTGTGCTGCTGCCGATGTTGATGTTGTAAAGCATAAGCCAAATTATCAGATGTAAAATCACTGATTGATTGTCAGTGGtttgtgcttatttattatcGGAGAAGACTTCTTtagcaaatgtttaaaatcattacattaaACACGCTGTTTGCCTCTGTGGATGAAGTCAGACGAA
>XM_043239201.1
GGTTGTGGTCACTACACTTCCCATGCCACCTTGCGGGTAAACAGGAACTTATCATGTCGGCAAGCAGGGCTGCTTTTCTCAAAAACATAATGAAATCGAAAATCATGATGGGGAATCGTGGAAAGAGGAACTGagattaacaaaaaaacccaaaaacgcTGTCACGAGGCTGTTTGAAATTCGTAAAACTTCTGATTAAGCACTCACAGGATGAGAGGGATTGTTACATTTTACCTAACCTATCTGCTGTGCCTGGTGTTGGGGGTCAGCTGTGTGGCATTGGTAGCTCACTGGAATTACAGCTATAGAGGTGGATTTGCATGGGATGGCTCAGCCAAACAGTTCAACTGGCACCCGGTCTTCATGGTCACTGGCATGGTGGTGCTTTATGGGAACGCGGCCGTAGTGTACCGTATTCCTCTGACGTGGGGTCACAATAAGCTCCCCTGGAAGCTGTTACATGCTGGGCTTCTGCtcctttctttcattctgtctgttATCGGGCTTTGTGCTGTGTTCGAGTACCACAATGCAAACCACACAGCCAACCTCTATTCCCTCCACAGCTGGGTGGGGATTTGTACCGCTGCGCTTTTTGCTGCACAGTGGGTAATGGGTTTCACGGCATTTCTTTTACCCTGTACTCCGATGACGGCACGTGCTCTTGTAAAGCCAGCTCATGTTTGGATGGGAGGAATCATCTTGGTACTGGGCATTGTGTCTTGCATCTCAGGGATCAACGAAAAACTCTTTTTTGCACTGAAGGGAAACACCAATGGGACGCTGCCGTATTCCGCATTACCACCAGAGGCAATAACTGCAAATGCACTGGGAGTCATCATTGTTGCATTTGGATTGGTTGTTTTGAAAATCTTATCCAATCAGATATGGCAACGTCCTGAGCCAGGCTATGAAGAGGGAGTTTATCAGCCATTTGGGTATGATGGAAGCTAACAAACCAAAGCTGAAATGactgaaatcaaaatattatcTGCACTCTTCGAAGGAATCAAAGTGCCCTGATGTTACAGCAATTCCTATTCCTAATTATACAGAGCGCTGCAGTTTACTGCAAAACTTCTCTTCATTATGTTTGATGTGATTGTGCTGCTGCCGATGTTGATGTTGTAAAGCATAAGCCAAATTATCAGATGTAAAATCACTGATTGATTGTCAGTGGtttgtgcttatttattatcGGAGAAGACTTCTTtagcaaatgtttaaaatcattacattaaACACGCTGTTTGCCTCTGTGGATGAAGTCAGACGAA

Function

symbol description
cyb561a3a Predicted to enable transmembrane ascorbate ferrireductase activity. Predicted to be involved in cellular iron ion homeostasis. Predicted to be located in late endosome membrane. Predicted to be active in lysosomal membrane. Orthologous to human CYB561A3 (cytochrome b561 family member A3).

NR:

description
PREDICTED: cytochrome b ascorbate-dependent protein 3-like

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0006810 transport biological_process
GO:0005765 lysosomal membrane cellular_component
GO:0031902 late endosome membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0046872 metal ion binding molecular_function
GO:0016491 oxidoreductase activity molecular_function

KEGG:

id description
K16295 CYB561A3, CYBASC3; lysosomal membrane ascorbate-dependent ferrireductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239200.1 True 1381 mRNA 0.44 7 9566515 9569294
XM_043239201.1 False 1277 mRNA 0.45 7 9566515 9569294

Neighbor

gene id symbol gene type direction distance location
zgc:153409 LOC105896809,LOC106958509,LOC103460788,LOC103154043,LOC107671222 coding downstream 583 9565479 ~ 9565932 (-)
LOC122345251 histh1l coding downstream 3219 9561925 ~ 9563296 (-)
loxl2b loxl2b,LOC107673422,LOC107721556,LOC107659291,LOC107709858 coding downstream 8144 9535533 ~ 9558371 (-)
sfrp1a LOC107587465,LOC107721541,LOC107659285,LOC107709857,LOC107673425,LOC107594997 coding downstream 48002 9508637 ~ 9518513 (-)
zmat4a zmat4a,zmat4,LOC107594996,LOC107587306 coding downstream 71865 9430925 ~ 9494650 (-)
hdr LOC107659287,LOC107721544,LOC107673363,LOC107709863,LOC107594999 coding upstream 1908 9571202 ~ 9575807 (-)
unc5db unc5db,unc5d,LOC107673416,LOC107709861,LOC107659286 coding upstream 10194 9579488 ~ 9681801 (-)
tm2d2 tm2d2,LOC107709865,LOC107673424,LOC107750179,LOC107672780 coding upstream 181358 9750652 ~ 9752957 (-)
tbx3b LOC107709835,LOC107592413,LOC107673376 coding upstream 184740 9754034 ~ 9757833 (-)
araf araf,LOC107709867,LOC107595004,LOC107673380,LOC107750175,LOC107672764 coding upstream 211544 9780838 ~ 9791734 (-)
G34704 NA non-coding downstream 318474 9246920 ~ 9248041 (-)
G34594 NA non-coding downstream 505701 9013306 ~ 9060814 (-)
G34607 NA non-coding downstream 575202 8991101 ~ 8991313 (-)
G34606 NA non-coding downstream 575492 8988611 ~ 8991023 (-)
G34583 NA non-coding downstream 632376 8933911 ~ 8934139 (-)
G34869 NA non-coding upstream 194779 9764073 ~ 9764532 (-)
G34871 NA non-coding upstream 196974 9766268 ~ 9766607 (-)
G34877 NA non-coding upstream 208339 9777633 ~ 9778238 (-)
G35035 NA non-coding upstream 712115 10281409 ~ 10296141 (-)
G35047 NA non-coding upstream 768453 10337747 ~ 10341167 (-)
G34789 vps37b,LOC107594993,LOC107673398,LOC107656485,LOC107587312,LOC107709855,LOC107721558 other downstream 163892 9337828 ~ 9402623 (-)
vamp5 LOC107594989,LOC107681225 other downstream 345987 9215498 ~ 9220528 (-)
G34580 LOC107681240,LOC107709820,LOC107560234,LOC107715750 other downstream 636462 8929470 ~ 8930053 (-)
LOC122345093 NA other downstream 888797 8674229 ~ 8677718 (-)
timm8b timm8b,LOC107717885,LOC107598437 other downstream 1134929 8429700 ~ 8431586 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other upstream 755665 10324959 ~ 10335343 (-)
G35122 NA other upstream 891914 10461208 ~ 10461709 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other upstream 1299070 10868364 ~ 10874064 (-)
G35384 NA other upstream 1354633 10923927 ~ 10926163 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other upstream 1391017 10960311 ~ 10969118 (-)

Expression


Co-expression Network