ap2b1 (ap2b1,LOC107681897,LOC107685655)


Basic Information

Item Value
gene id ap2b1
gene name ap2b1,LOC107681897,LOC107685655
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 21925498 ~ 21953026 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239242.1
CGTCCGTTGGTTCCGcgcttcattttgtttttccgGGTGCGCTCCATCTTCCAGCGCCGACCAAAAGCAGAGGCAGCAACCGCATCTCCCATCTCGCCGGGAAGCGCTTCTGTAATCGAGGATTTTCCTATATTGCGTCGATTCTTGCATCCTTTATCTGAGAAGCTGTCAGAATGACCGACTCCAAGTATTTTACCACCAACAAAAAAGGTGAAATCTTTGAGCTGAAGGCCGAGCTGAACAATgagaagaaggagaagaggaAAGAGGCAGTGAAGAAAGTCATTGCAGCCATGACAGTGGGCAAGGATGTCAGTTCCTTGTTTCCAGATGTGGTAAACTGCATGCAGACGGATAACCTGGAGCTGAAGAAACTGGTTTACCTGTACCTTATGAACTATGCCAAGAGTCAGCCCGACATGGCCATCATGGCCGTTAACAGCTTTGTCAAGgACTGTGAGGATCCAAACCCTCTGATCCGAGCTCTGGCTGTGCGTACAATGGGCTGTATTCGTGTGGACAAGATCACTGAGTACTTGTGCGAGCCTCTGCGAAAGTGTCTGAAGGATGAAGACCCCTATGTGAGGAAGACCGCTGCAGTGTGCGTGGCCAAACTGCATGACATCAACGCCCAGATGGTGGAGGACCAGGGCTTCCTGGATTCTCTCAGGGACCTGATCGCTGATTCCAACCCCATGGTTGTGGCTAATGCAGTTGCTGCCCTGTCTGAGATCAGCGAATCTCACCCCAACAGCAACCTTCTGGACCTGAATCCTCAGAACATCAATAAGCTCCTGACAGCCCTCAACGAATGCACTGAGTGGGGCCAGATCTTCATCCTGGACTGTCTCTCCAACTACAACCCCAAAGACGAGCGTGAGGCCCAGAGTATCTGTGAGCGTGTGACCCCTCGTCTCTCTCATGCTAACTCGGCTGTGGTGCTGTCAGCGGTGAAGGTACTGATGAAGTTTCTGGAGCTCCTGCCTAAGGACTCCGATTACTACAACACTCTTCTGAAGAAGCTCTCTCCTCCCCTCGTCACGCTCCTGTCTGGGGAACCCGAGGTCCAATATGTCGCCCTGAGGAACATCAACCTTATCGTGCAGAAACGACCCGAGATTTTGAAGCAAGAGATCAAAGTGTTCTTTGTCAAGTACAATGACCCCATCTATGTCAAACTGGAGAAACTGGATATCATGATCCGCCTGGCCTCTCATGCCAACATCGCCCAGGTGTTGGCTGAACTGAAAGAGTATGCCACTGAAGTGGATGTAGACTTTGTTCGGAAAGCCGTTCGAGCCATTGGCCGTTGTGCTATCAAAGTGGAGCAATCTGCTGAGCGCTGTGTTAGCACTCTGCTGGACCTCATCCAGACTAAGGTCAATTACGTCGTGCAGGAGGCCATTGTGGTCATCAGGGACATCTTCCGCAAATACCCCAACAAGTACGAGAGCATAATTGCCACTCTGTGTGAAAACCTGGACTCTTTGGATGAGCCAGACGCTCGAGCTGCCATGATTTGGATTGTGGGAGAATATGCTGAGCGTATCGACAATGCCGATGAGCTCCTGGAGAGCTTCCTTGAGGGCTTCCATGATGAAAGCACTCAgGTCCAGCTGACTCTGCTGACAGCCATCGTGAAGCTGTTCCTGAAGAAGCCCTCAGAAACTCAGGAGCTGGTTCAGCAAGTGCTCAGTCTGGCCACTCAGGACTCTGATAACCCTGACCTGCGTGATCGTGGCTACATCTACTGGCGTCTGCTGTCCACCGACCCTGTGACCGCTAAAGAGGTTGTGCTGTCTGAGAAGCCTTTGATTTCAGAGGAAACAGACCTGATCGAGCCCACCCTGTTGGATGAGCTCATCTGCCACATCGGCTCGCTGGCTTCCGTCTATCACAAACCCCCCAATGCCTTTGTGGAAGGAAGCCACGGCATTCACCGCAAACATCTGCCCATCCAGCACGGCAGTATCGACACCGGGGAGAGTCCGGTCAGTGCCGGCCCGGCTGCTTCTATCGATCAACCCCAAGTCATTCCTTCTCAGGGTGATCTTCTGGGAGACCTGCTTAATCTGGACCTCGGTCCCCCCGTCAACGTGCCCCAGGGGTCTTCCATGCAGATAGGCGCTGTGGATCTCCTCGGAGGTGGTCTTGACAGTTTGCTCGGGGGAGATCTGGGAGGAGGTGTTGGGGGCAGTCCTGCAGTGGGCCAGAACTTCATCCCATCATCGGTACCCAACACCTTTGCTCCGTCTCCTACACCTGCTGCTCTCAGCAGCGGCCTCAATGACCTGTTTGAGTTGTCGTCAGGAATGTCCATTGCTACAGGAGGATATGTGGCACCTAAAACTGTATGGCTACCAGCAGTCAAAGCAAAAGGACTGGAGATATCTGGAACCTTCTCTCGGCGTCAGGGTCACATGTACATGGACATGTCCTTCACCAATAAAGCCCTGCAGCACATGACTGACTTTGCCATCCAGTTCAACAAGAACAGTTTCGGTGTGATCCCCACCACCCCTCTCCCCGTTCACACTCCACTGATGCCCAGCCAGAGCATCGACATCTCCCTTCCTCTCAACACCATCGGCCCTGTGATGAAAATGGACCCACTCAACAACCTACAGGTGGCTGTGAAAAACAATATTGATGTCTTCTACTTCAGCACGCTGATCCCTCTCAATGTCTTCTTTGTGGAGGATGGCAAAATGGAGCGTCAGGTGTTCTTGGCCACGTGGAAGGACATTCCAAATGAGAATGAGCTGCAGTACCAGATCAAAGACTGCCACTTAAACGCAGATACGGTGTCAGGCAAACTGCAGAACAACAATGTCTACACCATCGCCAAGAGGAACGTGGAAGGCCAGGACATGCTGTATCAGTCACTCAAACTTACCAATGGGATCTGGATCCTCGCCGAACTCCGCATACAACCTGGCAATCCCAATTACACGCTCTCTCTGAAATGCAGGGCTCCAGAGGTGTCTCAGTATGTGTACCAGATGTACGATGCCATTCTGAAGAATTAAACGTCTCCATCATCCTTTTCTCCCTCTACGTATATTTGTCTGCAGGATCCAGCTCTCCATGTTTTCTGCCATTGTTTTATATCCGTCTATAGGTACCAGTTTACTCCATGTGCCCACTACGTAAAAGTCATGTTCGGTGGTAGCCAAATGTCTTGATGTTGTTGATAAAGTGTTGAAGGGATTTTTGGAACACGGCTCCAGTGTGATTCtatatttttgaatgctttGACAGTGCTTCACCTTCACACGCCCTGGATTGGTCATATGCAAAGAAGGAGAAAGTGTACGAGTTGAATCTATAAATAGCGTCAAGGGAATGTAACCAAGCAGAAACGTAATGTGGATGTACTTTATAAAAGTTATCCTATTATAATGGTAACCACTGAAAGACCACTTAGTTATCGTTTTTGCATCTACGTCATGCATTTTGGCAttattgcttttgtttcatTCTCTGATATGCTGCAGTGTTGCTTCATGCAATTGTACAATGTGCCACCTATCTGATATTAGCCTTGCATGCTTTGACCAATGCAAAAACGCCACATTCCTTTTTAACGTTTTGTATACCTTGTTCATCCTAACCACTGTATGAACATGCCGACACTCCATCACTATCTTATATTGTTTGTACTGCTATGAATCAACTTAATGTGATAGAAAAGACTTAAAAGACATGTTTTCTATCGATCTTGTATAAGTGGGCCATCTGATATTCATTCCCAGACCGAATCCATCCATATGTGATATATTGTGCTTGTGAAAGTGAGTAGGTTTTGTGAGGTAGTTGTTggtctctttggagtgttagaAATATCTGTTCAACATTCGTATACAACCACGCTCAGCTTTGGATCGAACTAATACACTAACAAATAGAGATGCAATAAACAGACTCGGCGATACGAGGACGGATGACTTTTGGACTGTTGAGTAGAGTTTGTTTTGTTCCCCGAAACTGTACTAGTCTTCATGGTGGTGCTGGTGACTAAATGTGAACCTTTTTTGTTGCCATAGTTGCTAATGTGCCTGTGAACCTGCATGTAAGCAGCGTCCAATAAACATCTGCCAGTAGAACACTTGTGTAAGAAGGTGAAATATTAAGACCGTAACCCTTATATGTGCAAATATGAGTTTTAATGATTACCAATGTTGCCAATGTGATCGCAGTGCATCTCGATACCGAAATGTGAAGTGTGACATAAAGAAATGACTGATCGGAttgtttcagatttattttatggatggtaattcaaaataaagtcaGCAGTGTGTATTCACCCTCAAA
>XM_043239243.1
CGTCCGTTGGTTCCGcgcttcattttgtttttccgGGTGCGCTCCATCTTCCAGCGCCGACCAAAAGCAGAGGCAGCAACCGCATCTCCCATCTCGCCGGGAAGCGCTTCTGTAATCGAGGATTTTCCTATATTGCGTCGATTCTTGCATCCTTTATCTGAGAAGCTGTCAGAATGACCGACTCCAAGTATTTTACCACCAACAAAAAAGGTGAAATCTTTGAGCTGAAGGCCGAGCTGAACAATgagaagaaggagaagaggaAAGAGGCAGTGAAGAAAGTCATTGCAGCCATGACAGTGGGCAAGGATGTCAGTTCCTTGTTTCCAGATGTGGTAAACTGCATGCAGACGGATAACCTGGAGCTGAAGAAACTGGTTTACCTGTACCTTATGAACTATGCCAAGAGTCAGCCCGACATGGCCATCATGGCCGTTAACAGCTTTGTCAAGgACTGTGAGGATCCAAACCCTCTGATCCGAGCTCTGGCTGTGCGTACAATGGGCTGTATTCGTGTGGACAAGATCACTGAGTACTTGTGCGAGCCTCTGCGAAAGTGTCTGAAGGATGAAGACCCCTATGTGAGGAAGACCGCTGCAGTGTGCGTGGCCAAACTGCATGACATCAACGCCCAGATGGTGGAGGACCAGGGCTTCCTGGATTCTCTCAGGGACCTGATCGCTGATTCCAACCCCATGGTTGTGGCTAATGCAGTTGCTGCCCTGTCTGAGATCAGCGAATCTCACCCCAACAGCAACCTTCTGGACCTGAATCCTCAGAACATCAATAAGCTCCTGACAGCCCTCAACGAATGCACTGAGTGGGGCCAGATCTTCATCCTGGACTGTCTCTCCAACTACAACCCCAAAGACGAGCGTGAGGCCCAGAGTATCTGTGAGCGTGTGACCCCTCGTCTCTCTCATGCTAACTCGGCTGTGGTGCTGTCAGCGGTGAAGGTACTGATGAAGTTTCTGGAGCTCCTGCCTAAGGACTCCGATTACTACAACACTCTTCTGAAGAAGCTCTCTCCTCCCCTCGTCACGCTCCTGTCTGGGGAACCCGAGGTCCAATATGTCGCCCTGAGGAACATCAACCTTATCGTGCAGAAACGACCCGAGATTTTGAAGCAAGAGATCAAAGTGTTCTTTGTCAAGTACAATGACCCCATCTATGTCAAACTGGAGAAACTGGATATCATGATCCGCCTGGCCTCTCATGCCAACATCGCCCAGGTGTTGGCTGAACTGAAAGAGTATGCCACTGAAGTGGATGTAGACTTTGTTCGGAAAGCCGTTCGAGCCATTGGCCGTTGTGCTATCAAAGTGGAGCAATCTGCTGAGCGCTGTGTTAGCACTCTGCTGGACCTCATCCAGACTAAGGTCAATTACGTCGTGCAGGAGGCCATTGTGGTCATCAGGGACATCTTCCGCAAATACCCCAACAAGTACGAGAGCATAATTGCCACTCTGTGTGAAAACCTGGACTCTTTGGATGAGCCAGACGCTCGAGCTGCCATGATTTGGATTGTGGGAGAATATGCTGAGCGTATCGACAATGCCGATGAGCTCCTGGAGAGCTTCCTTGAGGGCTTCCATGATGAAAGCACTCAgGTCCAGCTGACTCTGCTGACAGCCATCGTGAAGCTGTTCCTGAAGAAGCCCTCAGAAACTCAGGAGCTGGTTCAGCAAGTGCTCAGTCTGGCCACTCAGGACTCTGATAACCCTGACCTGCGTGATCGTGGCTACATCTACTGGCGTCTGCTGTCCACCGACCCTGTGACCGCTAAAGAGGTTGTGCTGTCTGAGAAGCCTTTGATTTCAGAGGAAACAGACCTGATCGAGCCCACCCTGTTGGATGAGCTCATCTGCCACATCGGCTCGCTGGCTTCCGTCTATCACAAACCCCCCAATGCCTTTGTGGAAGGAAGCCACGGCATTCACCGCAAACATCTGCCCATCCAGCACGGCAGTATCGACACCGGGGAGAGTCCGGTCAGTGCCGGCCCGGCTGCTTCTATCGATCAACCCCAAGTCATTCCTTCTCAGGGTGATCTTCTGGGAGACCTGCTTAATCTGGACCTCGGTCCCCCCGTCAACGTGCCCCAGGGGTCTTCCATGCAGATAGGCGCTGTGGATCTCCTCGGAGGTGGTCTTGACAGTTTGGTGGGCCAGAACTTCATCCCATCATCGGTACCCAACACCTTTGCTCCGTCTCCTACACCTGCTGCTCTCAGCAGCGGCCTCAATGACCTGTTTGAGTTGTCGTCAGGAATGTCCATTGCTACAGGAGGATATGTGGCACCTAAAACTGTATGGCTACCAGCAGTCAAAGCAAAAGGACTGGAGATATCTGGAACCTTCTCTCGGCGTCAGGGTCACATGTACATGGACATGTCCTTCACCAATAAAGCCCTGCAGCACATGACTGACTTTGCCATCCAGTTCAACAAGAACAGTTTCGGTGTGATCCCCACCACCCCTCTCCCCGTTCACACTCCACTGATGCCCAGCCAGAGCATCGACATCTCCCTTCCTCTCAACACCATCGGCCCTGTGATGAAAATGGACCCACTCAACAACCTACAGGTGGCTGTGAAAAACAATATTGATGTCTTCTACTTCAGCACGCTGATCCCTCTCAATGTCTTCTTTGTGGAGGATGGCAAAATGGAGCGTCAGGTGTTCTTGGCCACGTGGAAGGACATTCCAAATGAGAATGAGCTGCAGTACCAGATCAAAGACTGCCACTTAAACGCAGATACGGTGTCAGGCAAACTGCAGAACAACAATGTCTACACCATCGCCAAGAGGAACGTGGAAGGCCAGGACATGCTGTATCAGTCACTCAAACTTACCAATGGGATCTGGATCCTCGCCGAACTCCGCATACAACCTGGCAATCCCAATTACACGCTCTCTCTGAAATGCAGGGCTCCAGAGGTGTCTCAGTATGTGTACCAGATGTACGATGCCATTCTGAAGAATTAAACGTCTCCATCATCCTTTTCTCCCTCTACGTATATTTGTCTGCAGGATCCAGCTCTCCATGTTTTCTGCCATTGTTTTATATCCGTCTATAGGTACCAGTTTACTCCATGTGCCCACTACGTAAAAGTCATGTTCGGTGGTAGCCAAATGTCTTGATGTTGTTGATAAAGTGTTGAAGGGATTTTTGGAACACGGCTCCAGTGTGATTCtatatttttgaatgctttGACAGTGCTTCACCTTCACACGCCCTGGATTGGTCATATGCAAAGAAGGAGAAAGTGTACGAGTTGAATCTATAAATAGCGTCAAGGGAATGTAACCAAGCAGAAACGTAATGTGGATGTACTTTATAAAAGTTATCCTATTATAATGGTAACCACTGAAAGACCACTTAGTTATCGTTTTTGCATCTACGTCATGCATTTTGGCAttattgcttttgtttcatTCTCTGATATGCTGCAGTGTTGCTTCATGCAATTGTACAATGTGCCACCTATCTGATATTAGCCTTGCATGCTTTGACCAATGCAAAAACGCCACATTCCTTTTTAACGTTTTGTATACCTTGTTCATCCTAACCACTGTATGAACATGCCGACACTCCATCACTATCTTATATTGTTTGTACTGCTATGAATCAACTTAATGTGATAGAAAAGACTTAAAAGACATGTTTTCTATCGATCTTGTATAAGTGGGCCATCTGATATTCATTCCCAGACCGAATCCATCCATATGTGATATATTGTGCTTGTGAAAGTGAGTAGGTTTTGTGAGGTAGTTGTTggtctctttggagtgttagaAATATCTGTTCAACATTCGTATACAACCACGCTCAGCTTTGGATCGAACTAATACACTAACAAATAGAGATGCAATAAACAGACTCGGCGATACGAGGACGGATGACTTTTGGACTGTTGAGTAGAGTTTGTTTTGTTCCCCGAAACTGTACTAGTCTTCATGGTGGTGCTGGTGACTAAATGTGAACCTTTTTTGTTGCCATAGTTGCTAATGTGCCTGTGAACCTGCATGTAAGCAGCGTCCAATAAACATCTGCCAGTAGAACACTTGTGTAAGAAGGTGAAATATTAAGACCGTAACCCTTATATGTGCAAATATGAGTTTTAATGATTACCAATGTTGCCAATGTGATCGCAGTGCATCTCGATACCGAAATGTGAAGTGTGACATAAAGAAATGACTGATCGGAttgtttcagatttattttatggatggtaattcaaaataaagtcaGCAGTGTGTATTCACCCTCAAA

Function

symbol description
ap2b1 Predicted to enable clathrin binding activity. Predicted to be involved in vesicle-mediated transport. Predicted to act upstream of or within intracellular protein transport. Predicted to be located in membrane. Predicted to be part of clathrin adaptor complex. Orthologous to human AP2B1 (adaptor related protein complex 2 subunit beta 1).

NR:

description
PREDICTED: AP-2 complex subunit beta-like

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0016192 vesicle-mediated transport biological_process
GO:0030131 clathrin adaptor complex cellular_component
GO:0008565 obsolete protein transporter activity molecular_function

KEGG:

id description
K11825 AP2B1; AP-2 complex subunit beta-1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239242.1 True 4317 mRNA 0.48 22 21925498 21953026
XM_043239243.1 False 4275 mRNA 0.48 21 21925498 21953026

Neighbor

gene id symbol gene type direction distance location
LOC122344852 rasl10b,LOC107685904,LOC107595522,LOC107681887,LOC107587740,LOC107710719 coding downstream 3425 21909774 ~ 21922073 (-)
hnrnpul1l hnrnpul1,hnrnpul1l,LOC107685667,LOC107681881,LOC107712123,LOC107587719,LOC107595510 coding downstream 29419 21886007 ~ 21896079 (-)
sympk sympk,LOC107685698,LOC107681888 coding downstream 58459 21856983 ~ 21867039 (-)
rsph4a rsph4a,LOC107587680,LOC107681891,LOC107685746,LOC107595477,LOC107712154,LOC107740515,LOC107710713 coding downstream 68955 21852568 ~ 21856543 (-)
si:dkeyp-117b8.4 si:dkeyp-117b8.4,LOC107712153,LOC107685711,LOC107595476,LOC107681893,LOC107740513,LOC107587679 coding downstream 76414 21842311 ~ 21849084 (-)
LOC122346220 NA coding upstream 6759 21959785 ~ 21959884 (-)
orai2 orai2,LOC107685638,LOC107595471,LOC107710735,LOC107681896 coding upstream 8404 21961430 ~ 21967136 (-)
bckdk bckdk,LOC107685622,LOC107681895,LOC106603456 coding upstream 14961 21967987 ~ 21984219 (-)
lrwd1 LOC107712122,LOC107587741,LOC107681902,LOC107710709 coding upstream 36919 21989945 ~ 21997417 (-)
alkbh4 alkbh4,LOC107712145,LOC107710716,LOC107681883 coding upstream 44610 21997636 ~ 21999412 (-)
G38523 NA non-coding downstream 48913 21867615 ~ 21876585 (-)
G38521 NA non-coding downstream 58037 21867128 ~ 21867461 (-)
LOC122345027 NA non-coding downstream 85398 21836313 ~ 21840100 (-)
G38515 LOC107712155,LOC107595525,LOC107685724 non-coding downstream 85825 21839359 ~ 21839673 (-)
G38510 sepw1,LOC107685796,LOC107587735 non-coding downstream 95766 21821476 ~ 21829732 (-)
G38543 NA non-coding upstream 55860 22008886 ~ 22010107 (-)
LOC122344815 NA non-coding upstream 85334 22038360 ~ 22041267 (-)
LOC122346224 NA non-coding upstream 86875 22039901 ~ 22040034 (-)
G38634 NA non-coding upstream 838664 22791690 ~ 22793053 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding upstream 920945 22873971 ~ 22876437 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 41476 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 99393 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 305915 21612688 ~ 21619583 (-)
G38359 NA other downstream 556450 21364238 ~ 21369048 (-)
LOC122345723 LOC107665045,LOC107595503,LOC107688632,LOC107731048,LOC107740809,LOC107740824 other downstream 989401 20906043 ~ 20936097 (-)
nrgna nrgna other upstream 1174186 23127212 ~ 23132008 (-)
LOC122345364 NA other upstream 1649210 23602236 ~ 23605748 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 1798854 23751880 ~ 23756588 (-)
G38973 NA other upstream 1934277 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 2026638 23979664 ~ 23997739 (-)

Expression


Co-expression Network