LOC122345273


Basic Information

Item Value
gene id LOC122345273
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12356836 ~ 12363715 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239263.1
TCTTCCTGTTTTAGAGAAGAAGCATGGCAGCGAAAAGTGGCATCAGTGCCGTTGATATGGAGATCACTTGGCTTGGCCAGATGTCTTGTATTTGTGCCTATAAGAACCGAGAGATGACACAGGGAGCTGACTACAAGGGCAGAGCGAATCTGTTTATGTATGACCTGAAGAAAGGGAATGTGTCCTTAAGACTGGCGGACTTCAGAGAGACCGATCTGGGGGTCTACATGTGCCGGTATCCAGTAAAAATGAAACACGGCAGATAACAGTAAATGTCGCAGAAGAAGTATCTGCTATCCTCGAAGACCAGCAGTTGTTTACAGTGAATTACCAAATGGATGAAACAAGCAACAAGTTGTCAGAGCGTCACGTTGATTCAGGCAGTCAGCTTGAGGACTACAAGATTAAAGAGGCAATGTACCGATTACAAGAGAGAAGCAGATGACGAATTATCATCACAGTACATCAAATTAGACCCAAGCCATCCAAACAAGCAGTCTGGgGATAATAGCAAGGAAACCAAAAGCAAGGGTAAGGATTTTTTGAGCCGAACTTCATATCACAATAAACCAAACGAGAGCCAGCACGGGATGGAGGTCTTAGAcaAGAACTTTCAGCTTGTTGTTCCCAGTACATCAGAAGAACCAGAGGTTTCTTTGGGGTCTGATTTGATCGTTCCTTGTTTCCTGTCTCCTGAGATCAGTGCGCTTGACCTTGAGATAAGCTGGTCTACCGATAcagcctgtgtttgtgtgtataaggACAAGCAGGTGATAGAAGGGGTTTTGTTCAAGGACAGAGCGAGTCTGTTCACTCACAAGCTTAGGGAAGGAAATGTGTCCTTACGACTGAAAAACTTCAGGCCATCAGATATAGGAAATTACCATTGTCAGGTCAGCGGCAAAGACCGAAGAGAGAGGATAACAGTAAGAGTGAGGATAAATCCTAGTGTCCAGTCTATGAGTCAGTCACCAATATTTCCAGATGGAAATGAGGATAAAAACGCCAACCAAAGAGAACCAAACAAAAaATTATCAAGGTGTGCTTCACATCACAGTGATTCAGATGAAAAACAACATGGGtTAGAATTACAGCAGAAGCGTCTCTGATCATTTTCAGCTTGTTATTCCTCAAACAGCTCAAGAAGCACAGATTTCTATGGGGTCTGAAATCACTGTTCCCTGTCACTTGTCTCCTGAAGTCTGTGCCAGTGCCATGCAGATCAAATGGTTTAAGGAGACAGACTGCGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239263.1 True 1250 mRNA 0.44 17 12356836 12363715

Neighbor

gene id symbol gene type direction distance location
LOC122344659 NA coding downstream 83198 12272217 ~ 12273638 (-)
LOC122345275 LOC107597264,LOC107672815,LOC107742671 coding downstream 160459 12190702 ~ 12196377 (-)
LOC122344646 NA coding downstream 179621 12173037 ~ 12177215 (-)
LOC122345274 NA coding downstream 183834 12169594 ~ 12173002 (-)
gab3 LOC107746243,LOC107597263,LOC107672781,LOC107663235,LOC107741201 coding downstream 433827 11902322 ~ 11923009 (-)
arhgap25 LOC107741203,LOC107557123,LOC107663229,LOC107654642,LOC107743332,LOC107597266 coding upstream 17649 12381364 ~ 12394042 (-)
cds2 cds2,LOC107597267,LOC107654641,LOC107741205,LOC107663217 coding upstream 32567 12396282 ~ 12409668 (-)
hs3st1l2 hs3st1l2,LOC107557106,LOC107741295,LOC107743333,LOC107654638,LOC107663220,LOC107578102 coding upstream 48626 12412341 ~ 12428382 (-)
si:dkey-174n20.1 si:dkey-174n20.1,LOC107696056,LOC107741298,LOC108255501,LOC108444311,LOC105893868 coding upstream 146851 12510566 ~ 12513965 (-)
limk2 limk2,LOC107743341,LOC107654635,LOC107696070,LOC107741211 coding upstream 176569 12540284 ~ 12560679 (-)
G35812 arhgap25,LOC107597266,LOC107743332,LOC107654642 non-coding downstream 100024 12255480 ~ 12256812 (-)
G35805 NA non-coding downstream 108128 12226918 ~ 12248708 (-)
G35804 NA non-coding downstream 109327 12228582 ~ 12247509 (-)
G35797 NA non-coding downstream 173857 12181487 ~ 12182979 (-)
LOC122345280 NA non-coding downstream 177086 12179051 ~ 12179750 (-)
G35922 LOC107696053,LOC107654639,LOC107743336,LOC107595973 non-coding upstream 80072 12443787 ~ 12445220 (-)
G35923 NA non-coding upstream 84499 12448214 ~ 12450765 (-)
G35928 NA non-coding upstream 100191 12463906 ~ 12515550 (-)
G35949 NA non-coding upstream 168675 12532390 ~ 12537802 (-)
LOC122345380 NA non-coding upstream 238501 12602216 ~ 12606938 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 37151 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 187426 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 540892 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 704209 11583780 ~ 11652627 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 889714 11419955 ~ 11467122 (-)
G35936 NA other upstream 138199 12501914 ~ 12505958 (-)
G36047 NA other upstream 690129 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 1215346 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 1290579 13654294 ~ 13699226 (-)
G36298 NA other upstream 1353409 13717124 ~ 13718543 (-)

Expression


Co-expression Network