LOC122345275 (LOC107597264,LOC107672815,LOC107742671)


Basic Information

Item Value
gene id LOC122345275
gene name LOC107597264,LOC107672815,LOC107742671
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12190702 ~ 12196377 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239265.1
GCAGATAAACAGAGAAGAAGCATGGCAGCGAAAAGTGGCAATGACTTTGAGCTTGTTATTCCTGAAAGAGGTGAAAGAGTTAAGATTACTTCAGGATCTGCTCTCATCGTGTCGTGTCACTTGTCTCCTGCAGTCAGTGCCGTTGATATGGAGATTACTTGGCTTGGCCGGATGTCTTGTATTTGTGCCTATAAGAACCGAGAGATGACACAGGGAGCTGACTATAAGGGCAGAGCGAGTCTGTTTATGTATGACCTGAAGAAAGGGAATGTGTCCTTAAGACTGGCGGACTTCAGAGAGACCGATCTGGGGGTCTACATGTGCCGGGTATCCAGTAAAAATGAAACACAGCAGATAACAGTAAATGTCGCAGAAGAAGTATCTGCTATCTTCGAAGACCAGCAGTTGTTTACAGTGAATTACCAAATGGATGAAACAAGCAACAAGTTGTCAGAGCGTCACGTTGATTCAGGCAGTCAGCTTGAGGACTACAAGATTAAAGAGGCAATGTACCAATTATCAATCCGCTCCTCATATCCCAGTGCTTCAGGGAATGATCAGCATAAGGATTACAAGAGAGAAGCAGATGACGAATTATCATCACAGTACATCAAATTAGACCCAAGCCATCCAAACAAGCAGTCTGGgGATAATAGCAAGGAAACCAAAAGCAAGGGTAAGTTTCTTTAAAGTCACCTTAAACTTTATCTGCATTTATctgaatatgcattattttttaaaacaattttgtgATGTGGtgtttgcattgtttgatgCCAAATTTATAGATAGAAAATATATGggttgtgtgtatgtgggttATAATATGTCTACTTTAAAAGCAGATTAGTGTGCATTTCTATATTAGCGTTATTATATTGTTCTCTATATATACGAATAAGAACATTTTACACACATCTCTTATAATCTGTGTGATGTGTGAACCTTGTGAGATGTGTGCTTTATAGATTTTTGAGCC

Function

NR:

description
PREDICTED: butyrophilin-like protein 2 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239265.1 True 979 mRNA 0.40 11 12190702 12196377

Neighbor

gene id symbol gene type direction distance location
LOC122344646 NA coding downstream 13487 12173037 ~ 12177215 (-)
LOC122345274 NA coding downstream 17700 12169594 ~ 12173002 (-)
gab3 LOC107746243,LOC107597263,LOC107672781,LOC107663235,LOC107741201 coding downstream 267693 11902322 ~ 11923009 (-)
shisa2a shisa2,LOC107746248,LOC107672960,LOC107597350,LOC107741289,LOC107557100 coding downstream 341747 11847127 ~ 11848955 (-)
zc3h12b LOC107741193,LOC107746237,LOC107672716,LOC107597257,LOC107663225 coding downstream 350660 11825267 ~ 11840042 (-)
LOC122344659 NA coding upstream 75840 12272217 ~ 12273638 (-)
LOC122345273 NA coding upstream 160459 12356836 ~ 12363715 (-)
arhgap25 LOC107741203,LOC107557123,LOC107663229,LOC107654642,LOC107743332,LOC107597266 coding upstream 184987 12381364 ~ 12394042 (-)
cds2 cds2,LOC107597267,LOC107654641,LOC107741205,LOC107663217 coding upstream 199905 12396282 ~ 12409668 (-)
hs3st1l2 hs3st1l2,LOC107557106,LOC107741295,LOC107743333,LOC107654638,LOC107663220,LOC107578102 coding upstream 215964 12412341 ~ 12428382 (-)
G35797 NA non-coding downstream 7723 12181487 ~ 12182979 (-)
LOC122345280 NA non-coding downstream 10952 12179051 ~ 12179750 (-)
G35690 LOC107597260,LOC107746241,LOC107672756,LOC107741198,LOC107663227,LOC107557115 non-coding downstream 319649 11866762 ~ 11871053 (-)
G35660 NA non-coding downstream 414589 11775805 ~ 11776113 (-)
LOC122344709 NA non-coding downstream 416090 11769860 ~ 11774612 (-)
G35805 NA non-coding upstream 30541 12226918 ~ 12248708 (-)
G35804 NA non-coding upstream 32205 12228582 ~ 12247509 (-)
G35812 arhgap25,LOC107597266,LOC107743332,LOC107654642 non-coding upstream 59103 12255480 ~ 12256812 (-)
G35922 LOC107696053,LOC107654639,LOC107743336,LOC107595973 non-coding upstream 247410 12443787 ~ 12445220 (-)
G35923 NA non-coding upstream 251837 12448214 ~ 12450765 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 21292 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 374758 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 538075 11583780 ~ 11652627 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 723580 11419955 ~ 11467122 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 1221584 10960311 ~ 10969118 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 121426 12317803 ~ 12319685 (-)
G35936 NA other upstream 305537 12501914 ~ 12505958 (-)
G36047 NA other upstream 857467 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 1382684 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 1457917 13654294 ~ 13699226 (-)

Expression


Co-expression Network