LOC122345313 (LOC107681049,LOC107706956,LOC107574963)


Basic Information

Item Value
gene id LOC122345313
gene name LOC107681049,LOC107706956,LOC107574963
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 24298530 ~ 24317831 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239343.1
TTCCGTTAGTTGGTAGGAGCAGACTGTCAGAGAAGGCGACAATGTGCAAGTGCTCGGCTGCATTTTATATTACTCTAGgTTTTGTATTTCTCTGGACAACTGAAGTATCAACAGGATCCTGTAACTGCGGTCATGACAATTTGAActtattgagaaaaaaatgtaacaacacTGAAGGAGTCTATGATTTGACatgctatataaaatataaaaacccatTTGTGTCCTTCTGCGAATGGAAAGGAGATGTATCAACCTCatacacactgtacacacaACAGAGGAGATGTagttgtgtaaatgtaaatcagaAGAATGGAATTTGGACTTCTGATGACTTTAGGGTTGTCTCAGGTTGGAATGTGACAGCTCACGTTTTTGCAAGCAGTGGATATCTGCCCTGGTGCACCTACAAAAACTTCAGTGGAATTCCATCCGATATTATGCTGTGTGGTCCTCATTCAAAACTAACTTACAAAAGAAGCTCAGGCCACCTGAATGTGCAGGTGGAGTGGGGAGATGGAAGAGAACATATTAAAAACTTCTTTGTAGAGTACAAAAAGTTCAACACTTCTTGCTGGAAAGAGCAACAGTCTAAGAACAACACAGAATGCGTTTTGTGGAATCTGACAACCTCTCTGCCTTACGACTTGCGAATACGTTGTGTTCCCACTGAAAAGTGTGTGCATTGTCCTCGCAGTGAGGTCATTGTAGTTCCACCGGAACTAACAGGTGCACCATCAATCAAGTTGGAGATTGAAGACCatatacaaaatcattttatatcacAAGGACAGAGAAAAGCAGTCATGAAGTGGGAGTATGCAGACAGTGGGTCTGTGTCTTACTATAACGTGACAGTGAAGAAAGTATCAGGGGAACAGTGCAATCAGGACAGTTTCAGAACTGAAGATTTATCACTCACCCTGATCCTGTCTTACTCGGCATACAACATCAGCATCAGGGCTGTAAACAGTGCCGGGTCTTCTTCTGTTTCCAGTATAACCACTGAACATATAAATGAATGGAAGGatgtgTTTCGGCCATTCGGTGTCAACATAACCTGCAACAACAGCTTTAGCCTGTACTGGAACAGGTCTGTCTcaagtgtgtgtttctctgtggaGTGGTGGGCCAAAGGACAGATCCCGAATTTTTGTTCATTCTACGAAAAGCAGACACACAAAGAAATAACTTGGAAAGCTGAAAGAATATTTCAGCCACATACAAGATATTATTTTGTCCTGTACACCAGACCGTACCTAGACACCTGCAACGTGAAGAATGTAAACAACAGTGAGACAACGTATGGCACAGCCGAAGCTTACTTCACTGAAGGAAGCCCTGTCGCTGCTCCTGGGTATGTGAGCATTTTGAATATTACCCAGCATTCTTCAGTAATCACATGGTTCCCCGTGTCTGAGGAGGACCTTCGTGGATTTCTATTAGGCTACTACATCTACTTGACATgggaaaataatgaaacaaCCTTCACAGTGGATTCCAGTTCAAACAGTTATGAGCTGCAGAATCTTGAAAGCAACAGTGCGTACCGTGTTCAGCTGTCTGCCTTTACAGCAGCTGGGGAAGGAGAGCGGAGTGATTTTAAACACTTCGACACACACCAGCTAGAATTCACAGCTTTGAACAGCATAATCGCTGCGGTCATTGTGGGAATAATAATTCTTTTACTGGCAGTTCACCTCAGCTGTCGACTTCTGCACAGaGCCAAGAAACTACTGTGGCCGAGTATACCAAATCCTGAGAACAGCAACGCTGTTCAGAAAATTGAAATTGCCTATGAATTGggTATCCTTGAGCCATTGAACAGACAGCGGTTAGAGGAAAGTGAGGGATGTGATCCAAGTACAGTGTGTGTCTTTGGGAAAAAGATGGAAGCATCTCCTCTCTGTAGCCCTCCCACTGCTCGGGTTTGTGTGCCAGCCACCTTTCTTGAAGATGAGCACAGCCCATTCATACCGGAGCAGACTGCACCACCTGACACCCCGGAACAAGTCCCCAACAATGAGTCCGATTCCAAAGGGACCTTCTCTATAGACTTTAAGACAGACCCCCCTTTGAACACCTCTGTTGATAAAGAAATCACAAACTTTGAAAGCAAAGAACCTGGAGAGACCATCTCCAACCCGACAGGATCAGACTTCACCCCAGCATCTCAGCCTGCAGTAGTTTTCATGAGCGATTACACTACCATGGAGATCTTCCAGCAGGTCACTATGGCTGGGATTCAGGGTCCATCCATACAAACAGTGAAACCTGGATTAGTTCCTGTACATCCAGGGCAGGATTATGTTCGCCAGTCCTATTTTTCGCAAGAAACAGTCCAGTAACCCACCAGGGGAATGTAATGGTACTAAATTATTGAACCCAGAAATCACAGTGCTTTGAGTTGCTTTTATCTGGTGATTTAGAGGACACTTACTGTACAGACACAAAATACCTCTGGAGCACCCTGAGATTAGGAGCCTCATTTAAGGGTACAACAATCATTTCCCTGTTGCTGACTTAACTTTAGGCTTTAGTCaacatctattaaaaaaatgcaatatgccACTTCTATTGAGAGTAAATTAGACCAAGGTACCTGAATTCTACCTCTGCAGCACCAGTGTTCATGACAGAGACCACTacatcaattatatatttatacatataatatgtagatatatagctatttttttacctaatcaaaataaaccaactgcagtttgactgAGATTAAGTCACAGCAGAGTCAAACAGGATAATATGGTAGAACGCTCGGTAAGAACTGGCAATATTTTGCATTGAGTTCATGAAGACCCTTTGCCTATAAAGGCCTCCCAACAGGAAATGATTgtagaagaagaagagggaTGAGTACTGCTAGAACTCCGGtgaaggctccctctgctggctgtgcattaggaatgcacaatgaattgtttctaatttctaaaaatgttatctGTTTTGAGTTATCTGTTTTGGAAAATACActcttataaaataataaaactacatgATTTACATGTAAA

Function

NR:

description
PREDICTED: interleukin-31 receptor subunit alpha-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239343.1 True 3038 mRNA 0.42 16 24298530 24317831

Neighbor

gene id symbol gene type direction distance location
LOC122345102 LOC107691787,LOC107600611,LOC107684345,LOC107595997,LOC107684346 coding downstream 33812 24253333 ~ 24264718 (-)
pcsk5a pcsk5a,LOC107728213,LOC107691788,LOC107684380,LOC107730328,LOC107596014,LOC107600598 coding downstream 45899 24230346 ~ 24252631 (-)
ntrk2b ntrk2b,LOC107691713,LOC107728215,LOC107600581,LOC107730333,LOC107596017,LOC108443857,LOC103044160,LOC108259739,LOC107684341 coding downstream 111045 24166208 ~ 24187485 (-)
tmem150ab tmem150ab,LOC107684378,LOC107600579,LOC107572579,LOC107728219,LOC107691718 coding downstream 200356 24092380 ~ 24098174 (-)
fkbp6 fkbp6,LOC107695148,LOC107600609,LOC107691791,LOC107728208,LOC103911693,LOC107730305 coding downstream 212026 24082446 ~ 24086504 (-)
cd180 LOC107742410,LOC107681052,LOC107600612 coding upstream 89164 24406995 ~ 24409513 (-)
pmchl LOC107683707,LOC107575048,LOC107738923,LOC107596031,LOC107730319,LOC107684382 coding upstream 212577 24530408 ~ 24530963 (-)
npr2 npr2,LOC107559735,LOC107746469,LOC107730344,LOC107684353,LOC107595992,LOC107683705,LOC108260050 coding upstream 228317 24546148 ~ 24585135 (-)
tprn tprn,LOC107559738,LOC107746472,LOC107684357,LOC107595990,LOC107730352,LOC107697983,LOC107734963 coding upstream 279256 24597087 ~ 24613743 (-)
tmem203 tmem203,LOC107559731,LOC107697982,LOC107684383,LOC107730349,LOC107580151 coding upstream 297527 24615358 ~ 24616916 (-)
G39137 NA non-coding downstream 17641 24277474 ~ 24280889 (-)
G39123 NA non-coding downstream 79003 24218993 ~ 24219527 (-)
G39122 NA non-coding downstream 80100 24218100 ~ 24218430 (-)
G39121 NA non-coding downstream 83370 24214526 ~ 24215160 (-)
G39120 NA non-coding downstream 85771 24212442 ~ 24212759 (-)
G39274 NA non-coding upstream 97069 24414900 ~ 24490792 (-)
G39285 LOC107738919,LOC107681053,LOC107600587,LOC107595995 non-coding upstream 152780 24470611 ~ 24479055 (-)
G39296 NA non-coding upstream 201836 24519667 ~ 24520387 (-)
G39298 LOC107683704,LOC107738921,LOC107600589,LOC107595993,LOC107730350 non-coding upstream 203731 24521562 ~ 24522021 (-)
LOC122345299 NA non-coding upstream 305728 24623559 ~ 24624878 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other downstream 21226 24265464 ~ 24277304 (-)
G39113 NA other downstream 98034 24197705 ~ 24200496 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other downstream 300791 23979664 ~ 23997739 (-)
G38973 NA other downstream 410850 23887303 ~ 23887680 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other downstream 541942 23751880 ~ 23756588 (-)
anapc2 anapc2,LOC107559737,LOC107730340,LOC107746468,LOC107683706,LOC107595991,LOC107684355 other upstream 269893 24587724 ~ 24594116 (-)
naa38 naa38 other upstream 428841 24746672 ~ 24748610 (-)
LOC122345923 NA other upstream 436371 24754202 ~ 24758668 (-)
G39413 LOC102215562 other upstream 964055 25281886 ~ 25282286 (-)
LOC122344921 NA other upstream 1244143 25561974 ~ 25568686 (-)

Expression


Co-expression Network