alg9 (alg9,LOC107691744,LOC107745128)


Basic Information

Item Value
gene id alg9
gene name alg9,LOC107691744,LOC107745128
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23510178 ~ 23518148 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239354.1
CCTGTGCTGGGTTCCTCCAGCGATGACGTCACGCGCAGCCGGCAGAAACATGGCGACGAAGAGTCTCCGTCAGCGCGGCCGACGGGGCAGCAAACAGGACGCGAGCAGCGCCGGCAGCGCCAGCAGCGCGCCCGCCGCCGACAGCCGGGCGGCGAAAGACGACAAATATGCGGAGGACGCTAAGTCCAGTGACCCGCGAAACGAGTCATCCGGTAAGGCAGGACAGGTGTGGGCTCCTGAGGGCTCCACGGCCTTCAAGTGCTTGGTGTCTGCCCGCTTCTGCGCTGCGCTCCTCAGCAACATCTCTGACTGTGATGAAACCTACAATTACTGGGAGCCAACTCACTACCTGCTGTATGGAACAGGAATGCAGACATGGGAATATTCCCCGGCCTACGCCATTCGGTCCTACGCGTATCTTTGGCTCCATGCCCTTCCTGCCTGCTTTCATGCCAAAATTTTACAAACCAACAAGgtccttgtgttttatttcctgCGCTGCATGCTAGCCTTtgcctgctgtgtgtgtgagctctaCTTCTACAAGGCCGTGTGTAAAAAGTTTGGCCTGCACGTGGGCCGGCTCCTGCTGGCGTTCCTGGTCTTGAGTGCAGGGATGTTCTGCTCCTCTGCAGCTTTCCTCCCCAGTACGTTTTGTATGTACAGTACAGTGGTAGCTATGACTGGCTGGTTCCAGGGGCACCCAAGTCTGGCTGTGCTGGGTATTGCAGCGGGGGCTATAGTGGGCTGGCCCTTTAGTGCCCTGCTGGGCATACCCATTGCCTTTGACCTGCTGTTTATGAAGAAGAAGTGGAAGAGTTTTATCACGTGGACTCTGGTGGCATTGCTCCTCTTTCTGATCCCTGTTGTTGTAGTGGACAGCTACTACTATGGAAAGCTGGTGATCGCTCCTCTTAATATAATACTTTACAACGTGTTCACTCCTCACGGGCCAGATCTTTATGgCACAGAGCCCTGGCATTACTACTTTGTGAATGGTTTCCTTAATTTCaacattgtgtttgtgttggccctcttttcttttcctctcacGGCGCTTATGGAGGCACTGCTCCAAAGATTTAATGTTCAGAACCTGGGCCGGCCGTACTGGTTAACCCTGTCTCCTATGTATCTGTGGATGCTGGTGTTCTTCACTCGTCCACATAAAGAGGAGCGCTTTCTGTTTCCCATCTACCCTCTCATCTGTCTGTGTGGGGCGGTGGCTCTCTCATCACTGCAGAAGTGCTATCACTTCATATTCCAGCGCTACCGTCTGGAGCACTACACCATCTCCTCCAACTGGCTGGCTCTCGGCTCTGTGCTGCTGTTTGGAGTGCTCTCTCTGTCTCGATCTGTGGCCCTCTTCAGAGGCTACCACGCTCCACTGGATTTGTATCCAGAATTTCACCGCATTGCTAAAGATCCTACAATCCACACGGTTCCAGAAGGAAGGCTGGTCAATGTTTGTGTGGGAAAAGAGTGGTACCGCTTTCCCAGCAGCTTTCTCCTTCCCAACAACTGGCACGTACAGTTCATCCAGTCAGAGTTCAGGGGTCAGTTACCTAAGCCATATGCCATGGGTCCTGATGCCACCTGGATAATCCCATCAGACATGAATGATCAGAATCTCGAGGAGCAGTCACGATACGTAGAACTGAAGCAGTGTCATTACCTGGTGGATCTAGCAACAGAAACCGAAGCCCCTCGTGAACCACAGTACGCCACTAACAAAGAAGAGTGGAGCATTATTGCTGAAAAGCCTTTTCTAGACACTACCAGGTCCTCCAGATTGCTCAGGGCCTTTTTTATCCCATTTCTGTCTGAGCAATACACCACCTACAGCAGATATGTCATCCTCAAACCGAGACGACCCAAAAACACCCGGAAAAGAGTGCAAGGCTGACCTGCCGCTCCTGTTATTTTTCCTTCAAAAAAGCTCCCGCAGTGCTTCATCATTTGGTCACAAGGTGTTCCTCCTAAGCTCTTTTTGCGTCCACGTGTGTGCGATTGTGTTTACGtacgagtgagtgagtgagtgaatgtgcCAGAGTTTGTTTGGGCATCTTGGCTATCAGGCCACGCAGTATCAGCCTGTTTGTAGACTTCAGTGGGGCTGCCTATCCCGGACAGTTCCAGCACAGAGCATGGATGCCTTACCCATCTTTCCCGATCATCTCTTCTCCATTCCGTGCCCTCTGTTCTTTTATTCCTGCTTGGGCttctctgcatttttttttctgaagcgTTTCAGAAGATTTCTGTTAAGACAACCCTTTAAGGACTACAGGTCCCTCGTTTGTTATGACCTCATCCTTGATCTGGGACAATGAACTGTACATGAACTGAACGTGAGTGCAGACCCAAACCAGATCTCGTGTCATCATCCATCCACCCAGAGCCGAACTTCTTGATTCATTTGTCCTGTTCGAGTAACTGGTCCAGGCCAGCCTCAGCTTCTCAGGATGAAAGTTGCACCAAAAACTCTCTCACTGTTCTCCTGTTCGGTCGTCGGTAAATGTGGACATTGACTGTGAGGTCAGACTACAGACCAGGACTATTGAGTGTTTACATTCCAAATAATGTTCGTCATCTTAATCATATCAGTGTTAACTGTGATCGAGTCAAATAAAAGAAGGCTGTCTTAA
>XM_043239355.1
CTGTGCTGGGTTCCTCCAGCGATGACGTCACGCGCAGCCGGCAGAAACATGGCGACGAAGAGTCTCCGTCAGCGCGGCCGACGGGGCAGCAAACAGGACGCGAGCAGCGCCGGCAGCGCCAGCAGCGCGCCCGCCGCCGACAGCCGGGCGGCGAAAGACGACAAATATGCGGAGGACGCTAAGTCCAGTGACCCGCGAAACGAACTCACTACCTGCTGTATGGAACAGGAATGCAGACATGGGAATATTCCCCGGCCTACGCCATTCGGTCCTACGCGTATCTTTGGCTCCATGCCCTTCCTGCCTGCTTTCATGCCAAAATTTTACAAACCAACAAGgtccttgtgttttatttcctgCGCTGCATGCTAGCCTTtgcctgctgtgtgtgtgagctctaCTTCTACAAGGCCGTGTGTAAAAAGTTTGGCCTGCACGTGGGCCGGCTCCTGCTGGCGTTCCTGGTCTTGAGTGCAGGGATGTTCTGCTCCTCTGCAGCTTTCCTCCCCAGTACGTTTTGTATGTACAGTACAGTGGTAGCTATGACTGGCTGGTTCCAGGGGCACCCAAGTCTGGCTGTGCTGGGTATTGCAGCGGGGGCTATAGTGGGCTGGCCCTTTAGTGCCCTGCTGGGCATACCCATTGCCTTTGACCTGCTGTTTATGAAGAAGAAGTGGAAGAGTTTTATCACGTGGACTCTGGTGGCATTGCTCCTCTTTCTGATCCCTGTTGTTGTAGTGGACAGCTACTACTATGGAAAGCTGGTGATCGCTCCTCTTAATATAATACTTTACAACGTGTTCACTCCTCACGGGCCAGATCTTTATGgCACAGAGCCCTGGCATTACTACTTTGTGAATGGTTTCCTTAATTTCaacattgtgtttgtgttggccctcttttcttttcctctcacGGCGCTTATGGAGGCACTGCTCCAAAGATTTAATGTTCAGAACCTGGGCCGGCCGTACTGGTTAACCCTGTCTCCTATGTATCTGTGGATGCTGGTGTTCTTCACTCGTCCACATAAAGAGGAGCGCTTTCTGTTTCCCATCTACCCTCTCATCTGTCTGTGTGGGGCGGTGGCTCTCTCATCACTGCAGAAGTGCTATCACTTCATATTCCAGCGCTACCGTCTGGAGCACTACACCATCTCCTCCAACTGGCTGGCTCTCGGCTCTGTGCTGCTGTTTGGAGTGCTCTCTCTGTCTCGATCTGTGGCCCTCTTCAGAGGCTACCACGCTCCACTGGATTTGTATCCAGAATTTCACCGCATTGCTAAAGATCCTACAATCCACACGGTTCCAGAAGGAAGGCTGGTCAATGTTTGTGTGGGAAAAGAGTGGTACCGCTTTCCCAGCAGCTTTCTCCTTCCCAACAACTGGCACGTACAGTTCATCCAGTCAGAGTTCAGGGGTCAGTTACCTAAGCCATATGCCATGGGTCCTGATGCCACCTGGATAATCCCATCAGACATGAATGATCAGAATCTCGAGGAGCAGTCACGATACGTAGAACTGAAGCAGTGTCATTACCTGGTGGATCTAGCAACAGAAACCGAAGCCCCTCGTGAACCACAGTACGCCACTAACAAAGAAGAGTGGAGCATTATTGCTGAAAAGCCTTTTCTAGACACTACCAGGTCCTCCAGATTGCTCAGGGCCTTTTTTATCCCATTTCTGTCTGAGCAATACACCACCTACAGCAGATATGTCATCCTCAAACCGAGACGACCCAAAAACACCCGGAAAAGAGTGCAAGGCTGACCTGCCGCTCCTGTTATTTTTCCTTCAAAAAAGCTCCCGCAGTGCTTCATCATTTGGTCACAAGGTGTTCCTCCTAAGCTCTTTTTGCGTCCACGTGTGTGCGATTGTGTTTACGtacgagtgagtgagtgagtgaatgtgcCAGAGTTTGTTTGGGCATCTTGGCTATCAGGCCACGCAGTATCAGCCTGTTTGTAGACTTCAGTGGGGCTGCCTATCCCGGACAGTTCCAGCACAGAGCATGGATGCCTTACCCATCTTTCCCGATCATCTCTTCTCCATTCCGTGCCCTCTGTTCTTTTATTCCTGCTTGGGCttctctgcatttttttttctgaagcgTTTCAGAAGATTTCTGTTAAGACAACCCTTTAAGGACTACAGGTCCCTCGTTTGTTATGACCTCATCCTTGATCTGGGACAATGAACTGTACATGAACTGAACGTGAGTGCAGACCCAAACCAGATCTCGTGTCATCATCCATCCACCCAGAGCCGAACTTCTTGATTCATTTGTCCTGTTCGAGTAACTGGTCCAGGCCAGCCTCAGCTTCTCAGGATGAAAGTTGCACCAAAAACTCTCTCACTGTTCTCCTGTTCGGTCGTCGGTAAATGTGGACATTGACTGTGAGGTCAGACTACAGACCAGGACTATTGAGTGTTTACATTCCAAATAATGTTCGTCATCTTAATCATATCAGTGTTAACTGTGATCGAGTCAAATAAAAGAAGGCTGTCTTAA

Function

symbol description
alg9 Predicted to enable alpha-1,2-mannosyltransferase activity. Predicted to be involved in protein N-linked glycosylation. Predicted to be located in endoplasmic reticulum and membrane. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum membrane. Is expressed in central nervous system; epiphysis; polster; and retina. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation Il. Orthologous to human ALG9 (ALG9 alpha-1,2-mannosyltransferase).

NR:

description
PREDICTED: alpha-1,2-mannosyltransferase ALG9 isoform X1

GO:

id name namespace
GO:0016757 transferase activity, transferring glycosyl groups molecular_function

KEGG:

id description
K03846 ALG9; alpha-1,2-mannosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239354.1 True 2648 mRNA 0.51 15 23510178 23518148
XM_043239355.1 False 2511 mRNA 0.50 14 23510178 23518147

Neighbor

gene id symbol gene type direction distance location
ppp2r1ba ppp2r1a,LOC107663771,LOC107691746,LOC107745127,LOC107603174,LOC108428700,LOC103032850 coding downstream 4435 23495138 ~ 23505743 (-)
btg4 btg4,LOC107745130,LOC107691802,LOC107600778,LOC107709986 coding downstream 62040 23446697 ~ 23448138 (-)
LOC122345314 fer,LOC107709787,LOC107691727,LOC107721649,LOC107663784,LOC107564044,LOC107603170 coding downstream 99026 23394164 ~ 23411152 (-)
hepacamb LOC107712936,LOC107556427,LOC107744315,LOC107691804,LOC107664307,LOC107600797 coding downstream 391034 23105929 ~ 23119144 (-)
ccdc15 ccdc15,LOC107691749,LOC107712940,LOC107556428,LOC107744316 coding downstream 405203 23098840 ~ 23104975 (-)
fdxacb1 fdxacb1,si:dkey-71l1.3,LOC107745124,LOC107574693 coding upstream 1112 23519260 ~ 23523750 (-)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203,LOC107663780 coding upstream 8430 23526578 ~ 23528254 (-)
bicdl2 zgc:153929,LOC107574699,LOC107743809,LOC107691738,LOC107663774,LOC107603196 coding upstream 30567 23548715 ~ 23554487 (-)
cryabb cryab,LOC107574702,LOC107603201,LOC107663778,LOC107691740,LOC107721632 coding upstream 41206 23559354 ~ 23562751 (-)
prpf4 prpf4,LOC107721635,LOC107691731,LOC107743802,LOC107663789 coding upstream 98028 23616176 ~ 23621160 (-)
G38769 NA non-coding downstream 152031 23357574 ~ 23358147 (-)
G38767 NA non-coding downstream 164381 23345589 ~ 23345797 (-)
G38747 NA non-coding downstream 472708 23036457 ~ 23037470 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding downstream 633741 22873971 ~ 22876437 (-)
G38634 NA non-coding downstream 717125 22791690 ~ 22793053 (-)
G38892 NA non-coding upstream 148693 23666841 ~ 23669869 (-)
G38982 NA non-coding upstream 384471 23902619 ~ 23902898 (-)
G39034 NA non-coding upstream 459028 23977176 ~ 23978527 (-)
G39050 NA non-coding upstream 550482 24068630 ~ 24069914 (-)
G39057 NA non-coding upstream 569732 24087880 ~ 24088812 (-)
nrgna nrgna other downstream 378170 23127212 ~ 23132008 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 1626156 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 1684073 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 1890595 21612688 ~ 21619583 (-)
G38359 NA other downstream 2141130 21364238 ~ 21369048 (-)
LOC122345364 NA other upstream 84088 23602236 ~ 23605748 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 233732 23751880 ~ 23756588 (-)
G38973 NA other upstream 369155 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 461516 23979664 ~ 23997739 (-)
G39113 NA other upstream 679557 24197705 ~ 24200496 (-)

Expression


Co-expression Network