tmem232 (LOC107691726,LOC107751260)


Basic Information

Item Value
gene id tmem232
gene name LOC107691726,LOC107751260
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23733743 ~ 23740396 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239359.1
aactttctctttatattgttttgtaatatcaTTTAGCCATTTCTTATTCTCAttgtgaatgtattttattgctttgaCTGTATCCTCAGAGtgttgttttatgaaaaatataaaaacactgagttgacataaaaaggcataaaaagtcaattataacaaaaataatcgCATACTTATGACGTTTAATCTCTTTGCCAATAGCTTGTTGTGTAACTTCCTGCATTACATTCGGCTCTTTAAAAAGTTTGTAAGATAATGTTGACAATAAAACCATAGCAACATTACGACATCCTGACAGTGTGACTGTTAGCATCGTGAGAGACTTTCCTGGACCTATCAATATGCCTATACTCAAAATTCCTATCAAACATTATTTAGGAATAGTGTCTCAGTCTCAGCAAGAGGATTTCAAGAAACGTTTCAGAAAGAGGGCTGAAGAAACTGGTACTGCTAGAAATACCACCGGTGTCAGAAgAAACCCATTGGAAACAACAGAAGGCTTCGTCGAAAAATACAATCGAGCGCAAGGATGCAAAGAGCAGGAACAGTATGAAAATGCTGCGCAGCAGTTTCTAAATCGATGCAAGCGTCGTGCAGGATTCACACGTGGAGGCGAAGGCAGATGTCTTGATCTCCCCTGGGCCTGGACACGGCTTCTCCTGCTAAGTTCATGCAACGGAAAAGTCAGAAACGATTCTCTGGACGTCCTGGTCGTATCACTGGACCACGCACCCGTTGATCCAGATCAGATCCCTGCGCTGTTCCACCTGGCAGAGTCAGCCCAGCGTTTCCTGAGCTCTGAAACAACTCTTTTGGGCCAGCCATGTTCTTACGAAGTGAAGATGCTGCAGcttGGTTATCTAGTCTCTCTGAGGCTGCTCGTCTTTAAACTGACCGGTAATTTGAAAGGACACCAGCCAAGCAGCGTCTATCTTCACAGCCTGAAAGGGCTGTTAAAATGTGAGACACGTTACCGAGAGCTTCCCAACATGTTATTTGCCGCTGACTTCATGCTGCGCGTCGGGGAGGATCTGTGCGCTCTCAGACTCGCCGACGCCGGTTCAGTGCAGgtctCTGCGGAAGCACGGGAGCACGGTGTTAACCAGATACTATGGCACTGCCTTCTCAGCTATCGCTGCGTGCAAAACAATGGCGCTCGGCTCTCTCCGGTGATCAAACGGCTTATGTTGCTGAGAGATAAACTTCAACACGACAACTGGGTCCACTGCGGGTTAGGACTGATGATCCTGGGAGAGGCTGCTAAATCTAGCATGCTCTGCCTTCAGACACTTATGAACCTTCACGTGACTCAAAGACAAGACCGTTCTCAGGAAATGACATCGCAGAGCGCGTCCTGGCCGTGGCAGCTGGAGCACATTTACTGCTCTGTTATGATCGACGTTTGCCAAAACAGCTACTGCGCTGAGCTGAAGAAAACAGCCCTCGGTGGACAGTCAAACTCTGCTCAGCGCAGGCCTTCTGGAGGACTTATAAGCTTGCTGAAACAATCGCATGAAGACGCGTGGAGGCTGCGGCACGGTGTGGTTCAGGGTTTGACACAGATCAGCCGCAGGATCACGCTTCAGGGAGCTTTGAGGAACGAGGCCCGGTTAACGCTGCAGGAACACCTGAAGCAGGAGACAGACCCCCGTGTCACGAACGCTGTGAGGATCACCCAGGGTGATAAAAGGCTTCTGGAGAAGCACAGAGAGAGGATGAGAAGTTCACACGCGGTTGAAGTAAGCGTATGTGCACAGAGCGAGCGGATCACCGGTCGGATAGCGCACTCTCTGTCCCAGATCTGCTCTGCAGACCACCAGCACAGAATAAAAACCACCGAACCCACAGCCGGGGCCGGAAGAGGACGCCCTGAACCCGTCGCACCCCGCTCGGTTACCAAAGACCTTCACAAAACACCAAGACAGGGAAAACATGAAGCTTCTCATCTGGACCTGAGAACCAGGACTGATATTGATCTGATTAAAGTTGTGGAAGATCAATGGCAAAAGGAACTGAAAATAATGGcggaaagagaggaagagattgAGAAGACAGagctggaggaagaggagaagagcATGAAGAAACGCACgaaaaagaacacaaaacctTATGAGTTACCATGGTTTTACAACACACCACGAGTCTATAAAGCAATGAGAAAAAGTCCTTAAAAACCAACCCAAAAAGTCTagacagtatttatttgtttgtaacatttctttcaaatgaCACAGATGAACATTCGGTGGCTATAATTGTAATCGCCAACACTGGTAAAAAGATGCATACTCTTCAGATAGTCAACACAGTtttcaagattaaaaaaaaaaaaaaaaaaaaggaatgtt

Function

NR:

description
Transposable element Tcb1 transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239359.1 True 2351 mRNA 0.46 14 23733743 23740396

Neighbor

gene id symbol gene type direction distance location
pja2 LOC107691728,LOC107721647,LOC107709785,LOC107663782,LOC107603188,LOC107564050 coding downstream 48963 23671287 ~ 23684780 (-)
atp6v1g1 atp6v1g1,LOC107709788,LOC107566902,LOC108259956 coding downstream 97575 23633681 ~ 23636168 (-)
slc31a1 slc31a1 coding downstream 101052 23623500 ~ 23632691 (-)
prpf4 prpf4,LOC107721635,LOC107691731,LOC107743802,LOC107663789 coding downstream 112583 23616176 ~ 23621160 (-)
cryabb cryab,LOC107574702,LOC107603201,LOC107663778,LOC107691740,LOC107721632 coding downstream 170992 23559354 ~ 23562751 (-)
lhx1b lhx1b,lhx1,LOC107728209,LOC107691793,LOC107600607,LOC107695154,LOC107730325,LOC107603180 coding upstream 250895 23991291 ~ 23996276 (-)
mrm1 mrm1,LOC107695155,LOC107603181,LOC107730354 coding upstream 299310 24039706 ~ 24042737 (-)
fzd9a LOC107600608,LOC107728207,LOC107691792,LOC107695150,LOC107572577,LOC107730317 coding upstream 329883 24070279 ~ 24072863 (-)
fkbp6 fkbp6,LOC107695148,LOC107600609,LOC107691791,LOC107728208,LOC103911693,LOC107730305 coding upstream 342050 24082446 ~ 24086504 (-)
tmem150ab tmem150ab,LOC107684378,LOC107600579,LOC107572579,LOC107728219,LOC107691718 coding upstream 351984 24092380 ~ 24098174 (-)
G38892 NA non-coding downstream 63874 23666841 ~ 23669869 (-)
G38769 NA non-coding downstream 375596 23357574 ~ 23358147 (-)
G38767 NA non-coding downstream 387946 23345589 ~ 23345797 (-)
G38747 NA non-coding downstream 696273 23036457 ~ 23037470 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding downstream 857306 22873971 ~ 22876437 (-)
G38982 NA non-coding upstream 162223 23902619 ~ 23902898 (-)
G39034 NA non-coding upstream 236780 23977176 ~ 23978527 (-)
G39050 NA non-coding upstream 328234 24068630 ~ 24069914 (-)
G39057 NA non-coding upstream 347484 24087880 ~ 24088812 (-)
G39059 NA non-coding upstream 361445 24101841 ~ 24107263 (-)
LOC122345364 NA other downstream 127995 23602236 ~ 23605748 (-)
nrgna nrgna other downstream 601735 23127212 ~ 23132008 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 1849721 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 1907638 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 2114160 21612688 ~ 21619583 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 11484 23751880 ~ 23756588 (-)
G38973 NA other upstream 146907 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 239268 23979664 ~ 23997739 (-)
G39113 NA other upstream 457309 24197705 ~ 24200496 (-)
tmc2a tmc2a,tmc1,LOC107684381,LOC107596032,LOC108437175,LOC107730318,LOC108259782 other upstream 525068 24265464 ~ 24277304 (-)

Expression


Co-expression Network