ppp2r1ba (ppp2r1a,LOC107663771,LOC107691746,LOC107745127,LOC107603174,LOC108428700,LOC103032850)


Basic Information

Item Value
gene id ppp2r1ba
gene name ppp2r1a,LOC107663771,LOC107691746,LOC107745127,LOC107603174,LOC108428700,LOC103032850
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23495138 ~ 23505743 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239361.1
TTTTCGTGCGCTGTTTCCAGGCAGCAAGTGAGAAACCCCGTAGCAGGAAATAGCTAAGCAGCCGTTAGCATCCAAGATGGCGGGAGCAGACAGCGACGACTCTCTTTACCCTATCGCCGTGCTAATAGACGAATTGAGAAACGAAGATGTTCAGTTACGGTTGAACAGCATTAAGAAGCTGTCCACCATCGCCTTGGCTCTAGGCGTCGAAAGAACACGCACTGAACTTCTGCCTTTCCTCACAGATACCATCTACGATGAGGATGAAGTTCTGCTTGCTCTTGCTGAACAACTGGGGAACTTCACTATGCTGGTTGGAGGCCCCGAATACGTGCATTGTCTCCTTccCCCTTTGGAGAGTTTGGCTACAGTTGAAGAGACGGTGGTGCGAGACAAGGCAGTGGAGTCCCTGCGGAAGATCTCCCATGAACACTCTCCAGTGGACCTGGAAGTGCACTTTGAGCCTCTGGTGAAGCGCTTGGCCAGCGGAGACTGGTTCACATCACGTACCTCTGCCTGCGGACTCTTCAGCGTCTGCTACCCACGAGTGTCCAGCACAGTCAAAGCTGAGATCCGCCAGCACTTCCGTACTCTGTGTTCTGATGATACTCCCATGGTGCGCCGTGCAGCCGCCTCCAAGCTGGGTGAATTTGCCAAAGTGTTAGAGCTGGAGTATGTCAAGAGTGACATCATTTCTCTCTTCACTGCATTGGCATCTGACGAACAGGACTCCGTTCGTCTCCTGGCCGTGGAGGCTGGTGTCAGCATTGCGACTCTGTTGCCTCAAGAGGATCTGGAAGCTCTGGTGATGCCAACTTTGCGCCAGGCTGCGGAGGACAAATCCTGGAGGGTTCGCTACATGGTTGCAGACAAGTTCTCTGATTTGCAGAAAGCTGTGGGTCCGGAAATTACAAAGAATGACCTAGTGCCAGCCTTCCAGAACCTCCTGAAAGACTGTGAGGCTGAGGTTCGTGCCGCCGCCGCAAACAAAGTCAAAGAATTCTGCGAAAATTTGCCAGAGGACAGTAGAGAGACGATCATTATGACACACATTCTCCCCTGTGTTAAGGAACTCGTCTCAGACACTAATCAGCATGTGAAATCTGCACTGGCGTCAGTCATTATGGGCCTCTCCACCATCTTAGGCAAAGACAACACCATTGAGCACCTGCTTCCCCTTTTCTTGGCCCAGCTCAAAGATGAGTGTCCAGAGGTTCGCCTAAACATCATCTCCAACTTGGACTGTGTGAACGAGGTGATTGGAATCCGCCAGCTTTCCCAGTCTCTGCTTCCAGCCATTGTTGAGCTGGCGGAGGATGCTAAATGGCGAGTACGACTGGCTATCATCGAGTACATGCCCCTTCTGGCCGGACAGCTGGGTGTAGAGTTCTTCGATGAAAAACTCAATTCTCTGTGTATGGCGTGGCTTGTTGATCATGTGTATGCCATCAGAGAGGCAGCCACCTGTAACCTGATGAAGCTAGTGGAGAAGTTTGGAGCAGAGTGGGCCCAGAACACCATTGTGCCCAAAGTGCTGGGCATGGCCAATGACCCCAACTACCTGCACAGGATGACTACGCTCTTTTGCATTAATGCTCTGTCTGAGGTGTGTGGACAGGAGATTACCACCAAACACATGCTCCCTGTAGTTTTCAAGATGTCCAACGACCAGGTAGCCAATGTGCGCTTCAATGTGGCCAAGTCTCTTCAGAAGATTGGACCTGTGCTGGACAGCAAttGTCTGCAGACAGAGGTAAAGCCAGTGCTGGAGAAACTGGCGTCAGATCAAGACATGGATGTGAAATATTTCGCCCAAGAGGCCATCAGTGTTCTTTCCCTGGCCTAATGTACCTACTTGCTGAACTTAAGACCCATCTCTCAAGTTGACCTGCATTGTATTTATTGACATCCAGGATCGTCCGCTGGACTGTTTATGGAGAAACAATGTGCTCTGTCCCCTTTCAGTGAGAAATGTTTTAGGGATACTTGGCTTCTCTCAGTGTTTTGTTCAGCTGTTCACCAAACACACACCTTGCTCTTCATTCTCTCCCGCCGAGCCCGTCTTGCTCTGTGTATCTCCACTTGCTAACCCTCAGCCTATGGTCACACACTTAGAGCTTTACTATCAATGTAACAATGTATTGAGGCATCATAGGTTTAGAAGATGTAGATGTTTTGAGGCATCAAGATTTAACTTCAGTCGACTGATCTAACGGACTGAATCTCTCCAGCTCTTACTGCTGATTTTAAGAGCTGACCCATGCATGCGCACAGCATGACACGAGGGCGAATCACTACTGCACCTTTCATTTGATTACTGTGTCCCCCGTGCCCCGTCTTACGCTGATCATTGTTGAACCAAGACCCCATAAAGCACTAGCTGCATGCCCGTTCTTTATTAACGGGCTTTGATACTGTTCCCCTATACTCAAAGTGCTTATCTTCTTAAAGGGACCACGACAGATTTCCACCTGCTTCCTGCAACCGTTCTAACAGGGGATGACGGGCTTTCCTAAACGGCCCTTTTTATCTTCGGAAGGCAAGCTTCTTCATTCTGTGCCATTGACCGTGTTGCACATTTTCTCGTTTTGTTTCGTTTTCAAGAAGACGTTTAACTCGTTTCCTTTATATGAATGCATCTGCATGCCTCTTGCGCACAGGTTCCATAGACCGGCAGTATATTGAGAAGCTCATTAATCCCAGGGCATCTTAAACTCCTTCCCTTAACACATTGCTTCTGCCTGTGATGTTGACTGTCCGATTCCTCTTCAGCTTCAGAGTGCAGTCAGTATAGTAGTATCTTCTATGTTATGAGTGTCATTAGAATGTGCTTCGGGTTTTATATGAATATGGTCACATTGCCCTTGATAGAAGGGAACTCAATAAAGAACGTTATATAACCCCA

Function

symbol description
ppp2r1a Enables protein antigen binding activity and protein heterodimerization activity. Involved in chromosome segregation. Located in chromosome, centromeric region and nucleus. Part of protein phosphatase type 2A complex. Implicated in autosomal dominant non-syndromic intellectual disability 36.

NR:

description
PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform

GO: NA

KEGG:

id description
K03456 PPP2R1; serine/threonine-protein phosphatase 2A regulatory subunit A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239361.1 True 2905 mRNA 0.49 15 23495138 23505743

Neighbor

gene id symbol gene type direction distance location
btg4 btg4,LOC107745130,LOC107691802,LOC107600778,LOC107709986 coding downstream 47000 23446697 ~ 23448138 (-)
LOC122345314 fer,LOC107709787,LOC107691727,LOC107721649,LOC107663784,LOC107564044,LOC107603170 coding downstream 83986 23394164 ~ 23411152 (-)
hepacamb LOC107712936,LOC107556427,LOC107744315,LOC107691804,LOC107664307,LOC107600797 coding downstream 375994 23105929 ~ 23119144 (-)
ccdc15 ccdc15,LOC107691749,LOC107712940,LOC107556428,LOC107744316 coding downstream 390163 23098840 ~ 23104975 (-)
slc37a2 slc37a2,LOC107691751 coding downstream 397879 23086295 ~ 23097259 (-)
alg9 alg9,LOC107691744,LOC107745128 coding upstream 4435 23510178 ~ 23518148 (-)
fdxacb1 fdxacb1,si:dkey-71l1.3,LOC107745124,LOC107574693 coding upstream 13517 23519260 ~ 23523750 (-)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203,LOC107663780 coding upstream 20835 23526578 ~ 23528254 (-)
bicdl2 zgc:153929,LOC107574699,LOC107743809,LOC107691738,LOC107663774,LOC107603196 coding upstream 42972 23548715 ~ 23554487 (-)
cryabb cryab,LOC107574702,LOC107603201,LOC107663778,LOC107691740,LOC107721632 coding upstream 53611 23559354 ~ 23562751 (-)
G38769 NA non-coding downstream 136991 23357574 ~ 23358147 (-)
G38767 NA non-coding downstream 149341 23345589 ~ 23345797 (-)
G38747 NA non-coding downstream 457668 23036457 ~ 23037470 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding downstream 618701 22873971 ~ 22876437 (-)
G38634 NA non-coding downstream 702085 22791690 ~ 22793053 (-)
G38892 NA non-coding upstream 161098 23666841 ~ 23669869 (-)
G38982 NA non-coding upstream 396876 23902619 ~ 23902898 (-)
G39034 NA non-coding upstream 471433 23977176 ~ 23978527 (-)
G39050 NA non-coding upstream 562887 24068630 ~ 24069914 (-)
G39057 NA non-coding upstream 582137 24087880 ~ 24088812 (-)
nrgna nrgna other downstream 363130 23127212 ~ 23132008 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 1611116 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 1669033 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 1875555 21612688 ~ 21619583 (-)
G38359 NA other downstream 2126090 21364238 ~ 21369048 (-)
LOC122345364 NA other upstream 96493 23602236 ~ 23605748 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 246137 23751880 ~ 23756588 (-)
G38973 NA other upstream 381560 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 473921 23979664 ~ 23997739 (-)
G39113 NA other upstream 691962 24197705 ~ 24200496 (-)

Expression


Co-expression Network