cryabb (cryab,LOC107574702,LOC107603201,LOC107663778,LOC107691740,LOC107721632)


Basic Information

Item Value
gene id cryabb
gene name cryab,LOC107574702,LOC107603201,LOC107663778,LOC107691740,LOC107721632
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 23559354 ~ 23562751 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239446.1
TGAAAGAGGCAAAGGCAGGCAAACAGTTTACATCATTATTCCAGAAAGATCCACAGCTGACTAGTCTGCCAGGGGCCGTCGGTGTTGCTCTATTTAAGTGCGCCAGCAGAAGAGACGACAGTTTTCTGAGCGCTGCTAAGGCCCAGACGCAAAATGGACATCGCCATTCAGCATCCCTGGTTCCGGCGCTCCTTCTGGCCATCCTTCTTTCCCAGCCGGATCTTTGACCAGCACTTTGGGGATCCCATCTCTGAGGCCGACATGATTCCCTCGCCGTACTACCCGCGACCTTCCTTTTTACGCTGGCCGAGCTGGGCGGACAGCGGACTTTCTGAGATGAAAATGGAAAAGGACCGTTTCTCACTAAATCTGGATGTCAAACACTTTAAACCAGAGGAGCTGTCCGTGAAAATCAATGGAGATTTCATTGAAATTCATGCCAAACATGAGGACCGTCAGGATGATCACGGTTTTGTCTCACGGGAGTTTCTAAGAAAATACCGTGTCCCTGCTGGTGTGGATCCAGCGTCCGTCACTTCCTCCCTGTCTTCCGATGGCGTTCTGTCAGTGATAGCCCCGCGCAAGCAGACAGACGGCCCGGAGCGCACCATTCCCATCAGCCGTGACGACAAACCCGCCGTGGCTGGGTCTCAGAAGAAGTAAAGCTGCTAGACTTCCATGTTTCAACTTTGTGTCACCCTGTCCCACTGTGCTTCACTGCAAGGGAATCATTTATTAGCCCGGCGTTTCCTGACAGGCCAAAACTCGTGTTGTCTTTGCTACAGCGGCTAGGGAAGAAACAGTTATTAGCTTGAAAACTCCATCAGCTTCGAACTAGCTGTAAACACAATCTCTCTCTAAATGATGAATGTTACCTAAAGGATTTTCCTAGAAATACACTTTTACAATAAAGTATTGTTTTCTGGCGATGCCACCACACAAAGGGGCTTTTGTATGTCGTGCGGCCTTGACGGCAAGACAAAGTATTTGAGTGTAGGagtatttttttacaaagtcAAACAGGCAAAAATGGGCCATTGTGTCAAGGCGGATCAAATAGCAAAAAATGCCACGGTCTCTGAATTTTAATGGCGTGGAGAGTCCGAAAAACGggaacactttacaataaggtcttATTAGCTACCGTACTTAATGCATAGATTTACATGaacaatatatttcatacagtatttattcatatttgttcaaattaataaataaaaatacaactttattgttatttcatgtTGGCTCTggtgcattaaatattattaacagatACGACACTTGAtgttaaaaattcatattaacCATTAACCAGTTTTCATTGTTAGTATATGCTATAAATAACTACTGTTAACAAATAGAACCTTGCTGTAAAGTGTTTCTTCTGTTGTTGTGCATCCTGAATGtgttaaaattgtttgtttttggtttgaaaaatgaagtttatttagatattaatgatggatttgGGACCAGAGGACGCAGTGAGGGATTTGGGATTTTATCGTTTTGACAAGATTTGTGAACATCGATCCAGTTTTTGATTGGTTAAAGGCTCATTTACGCACTGCATTGCTTGAATTTATGCTTATGCCAATACGCCATATTTTAACTTACATGACAATAGCAGCAGGAGGGCTTTAGATCGTAAGGATAAAGGGGGTTATGAACacctttcaaataaatattataaaaataaaataacgcaGTTAATTCACGGTGAAGCTGCAGAACTGCTGTTTAATGCAACAATCCATGAAAACTGAAGCATGTTAAAGCAAGTGTATTCACGCAAGCATGCTGCGTAGGTCAAAGGTCTCCCGTGATATTTACCGAATGATATTTTAACGTTATTTCCGAGAGGGAGATGTGAGGTGAGACGTTTGTGCATGTGAATAAGTGCCAAGAATTTCTATTGTTCACTGAGACTATTCGGTATCTTAGCAATGGCTCACTTATTCAACAATGGTAAAGCTGCTAATATCAAACTAAATCAGTCCTTTTTTGATGTGGAAAAGCAACATAAGCAGGTTCCGACAGAGATGGATGAAAAATATCCTGGTTTCCTCACCACTACGCTAAAGCAAAGGCCCGGTGCATTACCCCCACTGGGAGGTGTAAGAGAAAAGGAGAACTTCAAAACATGGCTTTGCGCTTTACGTTCCTCTTTAATCACAGCTGAAGCGCTGAATTAACTCATTAACGGCATTAAACAGTTATCAATAAACACTTCAGCCTTTCAAA

Function

symbol description
cryab Enables several functions, including amyloid-beta binding activity; protein homodimerization activity; and unfolded protein binding activity. Involved in several processes, including negative regulation of cellular component organization; negative regulation of transcription, DNA-templated; and protein stabilization. Acts upstream of or within cellular response to gamma radiation and regulation of cell death. Located in cytoplasm and nucleus. Part of protein-containing complex. Implicated in cataract 16 multiple types; dilated cardiomyopathy 1II; fatal infantile hypertonic myofibrillar myopathy; and myofibrillar myopathy 2.

NR:

description
PREDICTED: alpha-crystallin B chain-like

GO:

id name namespace
GO:0005212 structural constituent of eye lens molecular_function
GO:0051082 unfolded protein binding molecular_function

KEGG:

id description
K09542 CRYAB; crystallin, alpha B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239446.1 True 2250 mRNA 0.42 3 23559354 23562751

Neighbor

gene id symbol gene type direction distance location
bicdl2 zgc:153929,LOC107574699,LOC107743809,LOC107691738,LOC107663774,LOC107603196 coding downstream 4867 23548715 ~ 23554487 (-)
ufc1 ufc1,LOC107574697,LOC107691797,LOC107603203,LOC107663780 coding downstream 31100 23526578 ~ 23528254 (-)
fdxacb1 fdxacb1,si:dkey-71l1.3,LOC107745124,LOC107574693 coding downstream 35604 23519260 ~ 23523750 (-)
alg9 alg9,LOC107691744,LOC107745128 coding downstream 41206 23510178 ~ 23518148 (-)
ppp2r1ba ppp2r1a,LOC107663771,LOC107691746,LOC107745127,LOC107603174,LOC108428700,LOC103032850 coding downstream 53611 23495138 ~ 23505743 (-)
prpf4 prpf4,LOC107721635,LOC107691731,LOC107743802,LOC107663789 coding upstream 53425 23616176 ~ 23621160 (-)
slc31a1 slc31a1 coding upstream 60749 23623500 ~ 23632691 (-)
atp6v1g1 atp6v1g1,LOC107709788,LOC107566902,LOC108259956 coding upstream 70930 23633681 ~ 23636168 (-)
pja2 LOC107691728,LOC107721647,LOC107709785,LOC107663782,LOC107603188,LOC107564050 coding upstream 108536 23671287 ~ 23684780 (-)
tmem232 LOC107691726,LOC107751260 coding upstream 170992 23733743 ~ 23740396 (-)
G38769 NA non-coding downstream 201207 23357574 ~ 23358147 (-)
G38767 NA non-coding downstream 213557 23345589 ~ 23345797 (-)
G38747 NA non-coding downstream 521884 23036457 ~ 23037470 (-)
G38658 nup88,LOC107691763,LOC107709758,LOC107600765,LOC107744326,LOC107664301 non-coding downstream 682917 22873971 ~ 22876437 (-)
G38634 NA non-coding downstream 766301 22791690 ~ 22793053 (-)
G38892 NA non-coding upstream 104090 23666841 ~ 23669869 (-)
G38982 NA non-coding upstream 339868 23902619 ~ 23902898 (-)
G39034 NA non-coding upstream 414425 23977176 ~ 23978527 (-)
G39050 NA non-coding upstream 505879 24068630 ~ 24069914 (-)
G39057 NA non-coding upstream 525129 24087880 ~ 24088812 (-)
nrgna nrgna other downstream 427346 23127212 ~ 23132008 (-)
LOC122344823 LOC107717639,LOC107712133,LOC107685828,LOC107710712,LOC107681889,LOC107575606,LOC107587718 other downstream 1675332 21877081 ~ 21884022 (-)
akap10 akap10,LOC107595480,LOC107587677 other downstream 1733249 21809013 ~ 21826105 (-)
G38355 abr,LOC107665039,LOC107595513,LOC107712163 other downstream 1939771 21612688 ~ 21619583 (-)
G38359 NA other downstream 2190306 21364238 ~ 21369048 (-)
LOC122345364 NA other upstream 39485 23602236 ~ 23605748 (-)
G38917 LOC107691721,LOC107751254,LOC107564048,LOC107721650,LOC107603186,LOC107663788 other upstream 189129 23751880 ~ 23756588 (-)
G38973 NA other upstream 324552 23887303 ~ 23887680 (-)
aatf LOC107695156,LOC107730321,LOC107600606,LOC107603183 other upstream 416913 23979664 ~ 23997739 (-)
G39113 NA other upstream 634954 24197705 ~ 24200496 (-)

Expression


Co-expression Network