cmklr1 (LOC107743349,LOC107597353,LOC107654611,LOC107741300,LOC107696054,LOC107595970)


Basic Information

Item Value
gene id cmklr1
gene name LOC107743349,LOC107597353,LOC107654611,LOC107741300,LOC107696054,LOC107595970
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12642656 ~ 12644497 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239478.1
TTGTGGAAGTGCAGCATGTGCAGTCATGCACACTATTGCTCAAGAGAAGGATAGAACGAAGGgtcattataaatgcaaaagtGACACAATTGTCAGATGACAAATGTGTGCTGGTGCAGTAATGCTGGAGATACTGCTGTTAGGCTGAGGGACTCGACAGATTTTTACGATGGATTCAGCAGATTTTGTATATGACTACGACAATTACATTGATTATGACAACATCACCTCCTCTGGTAATGTAACTCCTGAAGAAGTTCATTTCCACTTCCACCACAACACCAAATGCTTCACTGAGGTTCTTTGCCTGTTGTTTCTGGTGATCAACGTGATCATCTGTCTGCTGGGCCTGGGAGGAAACGGTGTGGTTATCTGGATTGCAGGGTTTGGCATGAAGAGGTCAGTCAACACTACCTGGTACCTCAGTTTGGCTGTGTCTGACTTCATATTCTGCGCCTGTTTGCCATTTAACATCGCCTACAGCGTCATGTCGGACTGGATCTTCGGGCTCTTCATGTGCAAGTTCACTTCCTTCGTCATGTTCCTCAACATGTTCAGCAGCATCTTCCTCCTCGTCATCATCAGCGTGGATCGCTGCGTCGCCGTCGTGTTTCCTGTTTGGGCACAGAATCACCGCACTGTTGGAAAAGCATCTGTGTTGATCTTGCTCGCGTGGATTGCCTCTACAGCTTTAAGTGTCCCGTCTATCGTATACCGCGATGTCCAGAATCACCTCGGTATAAACCATTGCATTAACAACTACACATCCAGCCAGTACAGCCACGAGTTCATTGCCATGAGCCGCTTTGTTTTTGGATTTGTGATTCCTTTCATCCTCATCATCGTTTGTTATACCGTCATTATACTCAGACTGAGAGCCACCCAGATGGCCAAGTCCAACAAGCCGTTCAAGATCATGACGGCTCTCATTCTGACCTTCTTTCTGTGCTGGCTGCCGTACCATATGTTTGTGCTAATTGAACTAAACCAGACCTTCCACAAAGAGGTCATCATTCTCGGACTAAAAATTGGCACCACTGTCGCCGCCGCAAACAGCTTCCTGAACCCCGTTTTGTACGTTTTCATGGGCAACGACTTCAGGAAGAAGTTCAGGAGCTCCATCTTATCAAAGATCGAGAATGCCATCGGAGAAGAAGGCCGAACGATCAGCCGCTATCTTTCTCGCTCCAGCTCAGTGGATACCAGGGCATCCACTCATATCTAAACTggatgtcatttttttacaattatttttttagtatcaatgtcaatttaaagcattcatttagtttttttattaatttaaaactcAACTAAACCAACACCCCTAAGTGTGCCTCCTGActgtaaattttaaaatgagaagtcttatttcaaaatgttttctttgcaattatttgtCAAATTTACTAGCAACTTCAGGCAGAAAATTGTTTCAAAGCCATTTACAAagaatgtattaataaataaaacatctgacAAAATACA

Function

NR:

description
PREDICTED: chemokine-like receptor 1

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004982 N-formyl peptide receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239478.1 True 1488 mRNA 0.43 2 12642656 12644497

Neighbor

gene id symbol gene type direction distance location
LOC122345379 NA coding downstream 134 12640377 ~ 12642522 (-)
limk2 limk2,LOC107743341,LOC107654635,LOC107696070,LOC107741211 coding downstream 81977 12540284 ~ 12560679 (-)
si:dkey-174n20.1 si:dkey-174n20.1,LOC107696056,LOC107741298,LOC108255501,LOC108444311,LOC105893868 coding downstream 128691 12510566 ~ 12513965 (-)
hs3st1l2 hs3st1l2,LOC107557106,LOC107741295,LOC107743333,LOC107654638,LOC107663220,LOC107578102 coding downstream 214274 12412341 ~ 12428382 (-)
cds2 cds2,LOC107597267,LOC107654641,LOC107741205,LOC107663217 coding downstream 232988 12396282 ~ 12409668 (-)
LOC122345863 NA coding upstream 24453 12668950 ~ 12673658 (-)
sart3 sart3,LOC107654630,LOC107597276,LOC107741219,LOC107595944 coding upstream 40561 12685058 ~ 12701945 (-)
tmem119a tmem119,tmem119a,LOC107597281,LOC107727157,LOC107741302,LOC107696065 coding upstream 63891 12708388 ~ 12712054 (-)
selplg NA coding upstream 67700 12712197 ~ 12714531 (-)
coro1ca coro1c,coro1ca,LOC107741221,LOC107696062,LOC107595940,LOC106584990 coding upstream 71554 12716051 ~ 12756150 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 3279 12637190 ~ 12639377 (-)
LOC122345380 NA non-coding downstream 35718 12602216 ~ 12606938 (-)
G35949 NA non-coding downstream 104854 12532390 ~ 12537802 (-)
G35928 NA non-coding downstream 127106 12463906 ~ 12515550 (-)
G35923 NA non-coding downstream 191891 12448214 ~ 12450765 (-)
LOC122345905 NA non-coding upstream 235564 12880061 ~ 12884157 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding upstream 269129 12913626 ~ 12916814 (-)
G36009 NA non-coding upstream 280246 12924743 ~ 12926462 (-)
G36012 NA non-coding upstream 288974 12933471 ~ 12933779 (-)
G36048 NA non-coding upstream 411072 13055569 ~ 13056705 (-)
G35936 NA other downstream 136698 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 322971 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 473246 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 826712 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 990029 11583780 ~ 11652627 (-)
G36047 NA other upstream 409347 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 934564 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 1009797 13654294 ~ 13699226 (-)
G36298 NA other upstream 1072627 13717124 ~ 13718543 (-)
G36336 NA other upstream 1173245 13817742 ~ 13818942 (-)

Expression


Co-expression Network