LOC122345379


Basic Information

Item Value
gene id LOC122345379
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12640377 ~ 12642522 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239479.1
AAACCAACCCATCACTAACTATCAGATAAACAGCGCTTGTAAACGGTGCTTGTTTAGTGTGGCTGTCGACAGTCTCAGTTCTCAGAAATTTGCTCGCATCTTACAGAGGAACTAGGTGTTAAAATGTTTGGCCAGTAGCTCAGTCTGCACTTATCAGCAAACAACCAGCAGCATTAGTTGATTTCTGAAGCACTGTAAACAGCACTGTGAAGCTTACTTTGCGAGACTTCAGTTCAGTTATAATGGCAGAGCAAATGGCTACAACTCCTGATTATAACTATGATTACGGTAACGATTCCACAAACAAGTCTATACACAGTAACCAAGCAGAAAGTCCAGAACACTGCAAGGATGCAGCATGTGTGATCACAGTGCTCTTTAATGTGATCTTATTCGTTCTTGGCATCTTTGGAAACGGCGCAGTGATCTGGATTactggttttaaaatgaacaagtcGGTGAACACCACCTGGTACCTGAGTCTGGCTCTGTCTGACTTCATTTTCTGCGCTACTCTCTTTTTAACTGTTGACTACATGGTGAAGAACAGCTGGACCTTTGGGCTCTTCATGTGCAAATTCAGCTCTTTTGCTATGACCCTCAATATGTACAGCAGCATTTTCATCCTGGCCATCATTAGTATGGATCGCTGCATCACCGTCAAGTTTCCCGTCTGGGCTCAGAATCAGCGAACCGTACAGAAAGCTTATGTAGTTGTTGTGCTAGTTTGGATCATGTCTTCTTTGCTTAGCATTCCACCTGCCAAATTCAGAGAGATTTTAGATATAACTACAAGAGTCATATGCTATAACAACTATGAAAATCACCAGAAAACCATAGTGCTCTTGCGCTTTACTTTTGGGTTTTGTATTCCATTCATGACCATCTTCACCTGTTACTCCGTCCTGATCAGTAAACTTAGAACAAACCAAATTTCCAAATCCACCAAGCCCTACAAGATCATGTCCATACTGATCGCAAGTTTTTTCATCTGTTGGTTGCCATATCAAATACTTTCGGTTTTAGAGTTGGGCCGATCTGAGCACAGCGATGCCTTTAAAACTGCCCAACAAGTATCTGCCGCTCTCGCCAGTGCAAACAGCTGTTTGAACCCGTTCCTCTATGCATTCATGGCCAAAGACTTAAAGAAGAAATGCTATTCCTTTCTTTCCAAGATTGAGAGCGCCATCGATGAAGAGACCCGAACTGCTTTCAGAGCAACTTCAATTACCAATTCTGTGGATCACAGAAATTCCACTGCTATCTGAAATTTTAACAGGAGTCATGGACTAAAAAGAGAATCCTTGCCCATAGAAACAACTTGGCAAGTAGTGCAATTGTTTTGTCTGTCGCATGTTTGAGTTTAAAAATTGACAGGTCGACGTCAAATAGAGGGTCAGTATAAGCTTAcgttttctgtttaataattttgtagAATTCTATGACaactattaatatttagtgtttttatcatttaagcTATTGGTTAACCTTTG

Function

GO:

id name namespace
GO:0042116 macrophage activation biological_process
GO:0002274 myeloid leukocyte activation biological_process
GO:0001775 cell activation biological_process
GO:0045321 leukocyte activation biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239479.1 True 1496 mRNA 0.41 2 12640377 12642522

Neighbor

gene id symbol gene type direction distance location
limk2 limk2,LOC107743341,LOC107654635,LOC107696070,LOC107741211 coding downstream 79698 12540284 ~ 12560679 (-)
si:dkey-174n20.1 si:dkey-174n20.1,LOC107696056,LOC107741298,LOC108255501,LOC108444311,LOC105893868 coding downstream 126412 12510566 ~ 12513965 (-)
hs3st1l2 hs3st1l2,LOC107557106,LOC107741295,LOC107743333,LOC107654638,LOC107663220,LOC107578102 coding downstream 211995 12412341 ~ 12428382 (-)
cds2 cds2,LOC107597267,LOC107654641,LOC107741205,LOC107663217 coding downstream 230709 12396282 ~ 12409668 (-)
arhgap25 LOC107741203,LOC107557123,LOC107663229,LOC107654642,LOC107743332,LOC107597266 coding downstream 246335 12381364 ~ 12394042 (-)
cmklr1 LOC107743349,LOC107597353,LOC107654611,LOC107741300,LOC107696054,LOC107595970 coding upstream 134 12642656 ~ 12644497 (-)
LOC122345863 NA coding upstream 26428 12668950 ~ 12673658 (-)
sart3 sart3,LOC107654630,LOC107597276,LOC107741219,LOC107595944 coding upstream 42536 12685058 ~ 12701945 (-)
tmem119a tmem119,tmem119a,LOC107597281,LOC107727157,LOC107741302,LOC107696065 coding upstream 65866 12708388 ~ 12712054 (-)
selplg NA coding upstream 69675 12712197 ~ 12714531 (-)
G35966 wscd2,LOC107597274,LOC107743343,LOC107696066,LOC107595945 non-coding downstream 1000 12637190 ~ 12639377 (-)
LOC122345380 NA non-coding downstream 33439 12602216 ~ 12606938 (-)
G35949 NA non-coding downstream 102575 12532390 ~ 12537802 (-)
G35928 NA non-coding downstream 124827 12463906 ~ 12515550 (-)
G35923 NA non-coding downstream 189612 12448214 ~ 12450765 (-)
LOC122345905 NA non-coding upstream 237539 12880061 ~ 12884157 (-)
G36004 fbp1b,LOC107718665,LOC107655925,LOC107596168,LOC107757529,LOC107596723 non-coding upstream 271104 12913626 ~ 12916814 (-)
G36009 NA non-coding upstream 282221 12924743 ~ 12926462 (-)
G36012 NA non-coding upstream 290949 12933471 ~ 12933779 (-)
G36048 NA non-coding upstream 413047 13055569 ~ 13056705 (-)
G35936 NA other downstream 134419 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 320692 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 470967 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 824433 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 987750 11583780 ~ 11652627 (-)
G36047 NA other upstream 411322 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 936539 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 1011772 13654294 ~ 13699226 (-)
G36298 NA other upstream 1074602 13717124 ~ 13718543 (-)
G36336 NA other upstream 1175220 13817742 ~ 13818942 (-)

Expression


Co-expression Network