ckma (ckma,LOC103045415,LOC107693439,LOC107596144,LOC107700235,LOC107548480,LOC107746363)


Basic Information

Item Value
gene id ckma
gene name ckma,LOC103045415,LOC107693439,LOC107596144,LOC107700235,LOC107548480,LOC107746363
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 13517643 ~ 13521568 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239503.1
attcagTGAGCTCTAAAATGGGCTAGCCAATGGCTGCAGGGGTTGGAGGTATATAAACCCAAATCAGACTCTTCTTGCTTGGGTGACCCCTATTTCGGCTTTGGTGAACAGGATCTGATCCCAAGGACTGTTACCACTTTTATTGTCTTGTGTGCAGTGTTAGAAACGCAACCATGCCTTTCGGAAACACCCACAACAACTTCAAGCTGAACTTCAAAGTTGAAGATGAGTATCCAGACCTTACCAAGCACAACAACCACATGGCCAAGGTGCTGACTAAGGAAATGTATGCCAAGCTTAGGGACAAGCAGACCCCCACTGGATTCACCCTGGATGATGCCATCCAGACTGGTGTTGACAACCCAGGTCACCCCTTCATCATGACTGTCGGCTGTGTTGCTGGTGATGAGGAGTCCTATGAAGTGTTTAAGGATCTCTTTGACCCTGTCATTTCCGACCGTCATGGTGGATACAAGGCAACAGACAAGCACAAGACCGACCTCAACTTCGAGAACCTGaagGGTGGAGATGACCTGGACCCCAACTATGTTCTCAGTAGCCGTGTGCGTACCGGCCGCAGCATTAGGGGATACGCCCTGCCCCCCCACAACAGCCGTGGAGAGCGCAGAGCTGTGGAGAAGCTGTCTGTTGAAGCTCTGAACAGCTTGGATGGAGAATTCAAGGGCAAATACTACCCCCTGAAATCCATGACTGATGCTGAGCAGGAGCAGCTGATCGCTGACCACTTCCTCTTTGACAAACCCGTCTCCCCCCTGCTGCTGGCTGCTGGTATGGCCCGCGACTGGCCCGATGCCAGAGGCATTTGGCACAATGAGAACAAGACCTTCCTGGTCTGGGTGAATGAGGAGGATCACCTGCGTGTCATTTCCATGCAGAAGGGTGGCAACATGAAGGAAGTGTTCAAACGCTTCTGCGTTGGTCTTCAGAAGATTGAGGATATTTTCAAGAAGCACAACCATGACTACATGTGGAACGAGCATCTTGGCTTCGTCCTGACCTGCCCCTCCAACCTGGGCACAGGCCTGCGTGGTGGTGTCCACGTCAAGCTGCCCAAGCTGAGCACACATGCCAAGTTTGAGGAGATCCTGACCAGACTGCGCCTGCAGAAGCGCGGCACAGGTGGTGTGGACACCGCTTCCGTCGGTGGAGTGTTTGACATTTCCAACGCTGATCGTATTGGCTCTTCAGAGGTTGAGCAAGTACAGTGTGTGGTTGATGGCGTCAAGCTGATGGTTGAGATGGAGAAGAAGCTGGAGAAGGGCGAGTCCATTGACAGCATGATCCCTGCCCAGAAGTAAAGCGGGAgcccttcctttttttttttctcgtcttgtctttttttttttttacagtccaTCGTGCAATCTGACATCAATGCAGAGGAAACTGCTGCTCAAAAAGACAGTCTCGCCTTTGCATCTGtcttgatttccttttttttcccttcttctttattttccatGTCACTTTGCCATCACTTTTTTCCACTTTTCTGTTCAGTTGGTAACATCTTGGGATCAGATTCCCGGCGCAGGAGTGAGCGCCTGTCGTCGAGGCTTCACCTAATTTCAGTCTTGGTTGTAAAAAGTGAATCAATCaagttgtatttaaataaaaataccccataaaacataaa

Function

symbol description
ckma Predicted to enable creatine kinase activity. Predicted to be involved in phosphocreatine biosynthetic process. Predicted to act upstream of or within phosphorylation. Predicted to be active in extracellular space. Is expressed in brain; cardiovascular system; eye; and musculature system. Orthologous to human CKM (creatine kinase, M-type).

NR:

description
PREDICTED: creatine kinase M-type

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K00933 E2.7.3.2; creatine kinase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239503.1 True 1657 mRNA 0.50 8 13517643 13521568

Neighbor

gene id symbol gene type direction distance location
rhogc rhogc,LOC107596156,LOC107655911,LOC107548489,LOC107700906,LOC108413814,LOC103046919,LOC105893231 coding downstream 105807 13409262 ~ 13411836 (-)
taf1 LOC107746351,LOC107700907,LOC107655912,LOC107757541 coding downstream 109696 13392656 ~ 13407947 (-)
zgc:158432 NA coding downstream 125686 13388012 ~ 13391957 (-)
trnap-agg_13 NA coding downstream 141943 13375629 ~ 13375700 (-)
efnb1 efnb1,LOC107746350,LOC107700912,LOC107548494,LOC107596159,LOC107757535,LOC107655917 coding downstream 213947 13270402 ~ 13303696 (-)
kptn kptn coding upstream 43598 13565166 ~ 13568196 (-)
ftr84 LOC107746428,LOC107700242,LOC107548471,LOC108437047 coding upstream 91093 13612661 ~ 13618357 (-)
il13ra2 LOC107700247,LOC107746374,LOC107693451,LOC107710577,LOC107548444,LOC107596132 coding upstream 125080 13646648 ~ 13653051 (-)
wdr44 LOC107548463,LOC107700250,LOC107746376 coding upstream 199213 13720781 ~ 13732483 (-)
trnam-cau_26 NA coding upstream 317322 13838890 ~ 13838962 (-)
G36227 alkbh6,LOC107746424,LOC107700897,LOC107548452,LOC107655907 non-coding downstream 70524 13446621 ~ 13447119 (-)
G36213 NA non-coding downstream 79539 13380299 ~ 13438104 (-)
G36229 NA non-coding downstream 98681 13414876 ~ 13418962 (-)
G36230 NA non-coding downstream 103256 13412644 ~ 13414387 (-)
G36200 eda,LOC107757537,LOC107700911 non-coding downstream 143888 13370210 ~ 13373755 (-)
G36218 LOC108260116 non-coding upstream 41086 13562654 ~ 13563898 (-)
LOC122345175 NA non-coding upstream 97458 13619026 ~ 13643325 (-)
G36279 NA non-coding upstream 112102 13633670 ~ 13637323 (-)
G36224 LOC107700249,LOC107746377,LOC107548465,LOC107710575,LOC105912484,LOC105027847,LOC106603104,LOC106563440 non-coding upstream 186532 13708100 ~ 13711959 (-)
G36297 NA non-coding upstream 191112 13712680 ~ 13713420 (-)
G36047 NA other downstream 462786 13053844 ~ 13054857 (-)
G35936 NA other downstream 1011685 12501914 ~ 12505958 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 1197958 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 1348233 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 1701699 11795656 ~ 11815944 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 57493 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 132726 13654294 ~ 13699226 (-)
G36298 NA other upstream 195556 13717124 ~ 13718543 (-)
G36336 NA other upstream 296174 13817742 ~ 13818942 (-)
LOC122345901 NA other upstream 323835 13845403 ~ 13848070 (-)

Expression


Co-expression Network