eng (LOC107562335,LOC107704777,LOC107741503)


Basic Information

Item Value
gene id eng
gene name LOC107562335,LOC107704777,LOC107741503
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 29614719 ~ 29655061 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239534.1
GTGAAAGTCGCTTTGCCGCGTGTTTGCTGtgctgtgtgtgagaggagCGCTGTCGCGTGAAGTGGGAGGGTCAGTGCTGCTGATGATGTCAGTGCCGAGGGTTCAGCTGGACTGAGTGACTGACTGACCGCTGGATCTCATCTGAACCGCCGGAGCCGTTCCCAGCGCGAGGAAGTGTTGAGTGTTGGATATTCTGGTCACTCTTCTACAATATCAGCCACAGTTGCCGGGTCCATCAGAAGAGGCACGTTTAGAGCCGAACAAACATCTGAACATGAGGAGCATCATATGTTTCATATGTGTTTTTCTATGTCTGAGAACCGCAGCTTCAGATTCCAGTCCGTTCTGTGAGCTGAATGATGTTCCCGGACACAGCAACGAGTGGAtcgtcctggaggaaatgtcTCTAGGATGCTGGACGAACTTCATCAGTCAGGACGGGAAAGAAGTCCACATCCTCAAGCTGCTGAAAGGACAGCAGTCAGTATCAGAACTCAACTTAACAGCGGCAAACCCATCAGTGGTGATCATCACCTCTAGCAGCGCACAAACCATCTTGCTTCACGACAGTCCCGCAGTGAACATCTACGTGACAAACGGGACCTCAATACACTTAATCCTGTCAAATAGCGGAAGTCCAAAAACACACGTCGCCCCGTTCGCAGACAGCGATTCCGAAGTTCTGGAATGGGCAGCAAAGACGTTTGGTGGAGTGACGTCCTTCACCACAGCACGAGATCCCGCGATCATCACTTTCACCGGGATAACAGGTGCTCAGCGACCATCAACGTGTGACCTGCAGCCGGAAGCACAAGCAGATAAACAGTTCATTGATCTGAAGCTGACACTTCCATCTGATGAGCTGAAATCATGCCACACAGAGCTTTCTAAAGAACAACTGCACGTGATCAATATTCCTGATGACATCAAAATACGgAATGTATCTGTGCATTTACCACACAACTCTAAAGTGGTCCTTAGAGGTCCAGCAGGCACTGTGTGGAACATCGCCAATGATATTCAGTTACTGTCGAACAATCATATATCCTTCAAAGGGTTCAGTTTGCCTCCGAAGAAAAATATCTCAGATGACCCTAGAGAAATCAGGCAGAAGGCATTGTCATACTACAACAGCACTTCCGTCACAAGTTACTCTGAGATCCGCCTGAACGTGTCACACATCCAGCTGTGGATCAGGGACAGCACAAGCCCCTCAGTATCAGCAGAAGTGAAGCACACTACACCAGCACCCAGTACTTCTACACTTCAGATGCAGCTGTTCTCATCCCCAGACTACAGGTTGCCTCTGGATCCCAGCAGCAAAGTTCAGAGTGACAAGAGAGTCTATGCAGAGATCTCAACTGAGAGTTATGGAGAGATTTCCTTAAGCATTAAGATCAGCAGCTGTAAGGTTCGCTCCATGCAAGTGGTGATGCAAATGCCGTTCAAAGAGGAGGGGGCCTGTTACATTAAGGACTGTCCTAAGAGACTCAGCTTCTCCTTTGAGATGCTTCAGGACCTGCCGTCCAGCTCGTGGGAACTCGAATGTGCAGTTCAACTTTGTCATGGTAAAATGttttgtacaAACGAAATGCACGTCAAGAGGAGCTTGCAGGTCAAGCCATATATTCCAAACGCAAATCGCTGTTTTGAGTTCGGGCTCTCAGCTGTTCTAGGAATCGCGTTCGGGGGATTTCTGATCGGAGTTCTCCTCACTGGTGCTTTATGGTTCATTAAGATACGAACAGGGCATCCTGTGGCTCTGGGAATGAGATCAACGGCAGCCGAGCTCTCAGTCCTCTCTATATCTGGATGCCCGTGTGGTTTGACCAAACGGCAGCCAGTGCCCACCCACTCGTCTCCCTCAGAGAACAGCAGCGCCAACGCCAGCATTGGCAGCACCCAGAGCACGCCCACCAGCAGCATGGCATAACGCCATCGCCATGCGTCCCTTCGCTCCTaaccctctctccctctcaaaGCCATGTCGCTCGATATGTCCCATCGTCCCGagcgagagaaaaagagaggcagTAGCAATCCTGAAACGTTCCCTGTACCTCACAATGCTCCATTCGCTTTCCCGGCTACGGGAAGTCAGTGGGGacgaagaacaaaaaaagaaaaagcttggCTCCCAGAGACAGGAAAAACAACGCATAACCCCCAGGAACTAACAGGAAATTCGTCGCATTCTTGCACCGGTGCCTCTCTGATGGAGGCGAACTAAGATTTCGCAGACAAACAGCGGTCTGACGCATCAGTTCGCTTTCAGACATGGCTAAATGTAGCTCAAAGAGACGACCGAACAAACGTCAGACCGCCCCATATCCAAACACTCGACTGTGGACTGACCTGATGAAATATTCAAACAAATCAAACTATTGGACATGAACATAAGGAAGcccttttttagttttagagtTCTTACTGAAAAGGCTGTCTAAAATGGGACAGATTGGGAAATGGCTACCTCGAAGTCTCTGTGGATGtagatttgtttaatatttgtttaaccATAAGTAAACAGTTGCTGAATCGCATGAAATCTGTCAAAATGTGTCCTATTTAACCCCCAAATCAACAGAAATACAGAagcattgttttgttatttttttttttttttcgcaattTGACATTATCTAATTTTTATTACTGATGTACAAAAAAGATGACGTTATTAAGAGTTCaaatgcaaaagcctctaagtgCTGTGTGAAATGTTCTtcttaaaatgagcatttttatcaggctgctatatttatgttcatttatttcagtaattgcaaagaaaatgcattaccattacagtaaaattagtAAACCTAAGCATAAGAGCCTGATAAAAATTcttatattagatttttagaCTGCACTTAGAGGCTTTCGGatatgaaatattcatataaatgaatttatcCTTTGATTatggggtgaaatatgacccaaaatgttttcatgagatgtattgtttatatatatatatatttttttaattgtgtaacTTTGTCTTCATTGagtgacaaaatatattttaattactttagtaATTAAGTaactttaaaggtgttttttgtgtgttcttgACCATAATATGTAGATTCTTTAAGCAGTGAAATCAGAATAAAGCAGATTCATAACTAAATATGTAATTTCCATATATTGGGAACTCAGCTTTTTCCCCtatgatttaaaattttgcaAAGGCAGTAGAACCAAAACCTCTTATGTGATTAGCTTAATTTACAAAAGCATACTATATGTTAcacattttgtgtgtatttatgtacactgaaaaaaatgggttggaatcaatttattttagctacatttaaataaaaaaaaattgactgaCTTTCatctaaatgtgtttatttaaaggtaGCTAAAAAAAAGGGTTTGCAACTACTTACcttaaatttatgaaaaaagtatgtatattttcagtgcatttgtatagaagattacatttatttgtctttttatatgACAAAAGAGCTGGAGATTATATAAAGTGTGTCAAAAACCAAAGGGCTAGTTGAGAAAAATCTGTGGTTGTCAACCCTCATCTTTCCAAgcttgtatgactttctttcatttgtGGATCACAAAAGTAGATGTTTAGCACAATGCTCACGCTGCTCTTTTTCATACAGTGAAAGCAGACAGTAACCCGGAGCTGTCAAGCTTCAAAGAGGACCAAAACaccataaaagcattaattatgaacacattcCAAGTCTACTAAAGCCATGTTTTGAGCAACGAGCCAAAATGAAATCCATTTTTTAAGCCAGAGAGGAAGATTTTCAATGTGCAACAGCTTTAATTAAGGTGCATTGCAAAAGTGTATATGAAGTGTACTGctgtgaactgttcctttaacatcaGGTGGATGTGAAAAGCAGGAAAATGCCACTTGAGCATTTGTGCAATAtctgtggtattttttttttcatataattgtttgtgtctatatgttatttttatactggATTTGTATATTAACTCAACATTTGTACTGCATGTTCTGTTCTCTCTGcaacatttccatttaaagcACTTACCGTATGGTCATTATCTGAAGTCATATTTCTTCTGTTCTACCCATTCTGAAGAATCATTTTATTCCAGTTGGacatactttaaattaaatcatgaaaACATTGA
>XR_006251000.1
CATGTACCGTGCGTGAAAGTCGCTTTGCCGCGTGTTTGCTGtgctgtgtgtgagaggagCGCTGTCGCGTGAAGTGGGAGGGTCAGTGCTGCTGATGATGTCAGTGCCGAGGGTTCAGCTGGACTGAGTGACTGACTGACCGCTGGATCTCATCTGAACCGCCGGAGCCGTTCCCAGCGCGAGGAAGTGTTGAGTGTTGGATATTCTGGTCACTCTTCTACAATATCAGCCACAGTTGCCGGGTCCATCAGAAGAGGCACGTTTAGAGCCGAACAAACATCTGAACATGAGGAGCATCATATGTTTCATATGTGTTTTTCTATGTCTGAGAACCGCAGCTTCAGATTCCAGTCCGTTCTGTGAGCTGAATGATGTTCCCGGACACAGCAACGAGTGGAtcgtcctggaggaaatgtcTCTAGGATGCTGGACGAACTTCATCAGTCAGGACGGGAAAGAAGTCCACATCCTCAAGCTGCTGAAAGGACAGCAGTCAGTATCAGAACTCAACTTAACAGCGGCAAACCCATCAGTGGTGATCATCACCTCTAGCAGCGCACAAACCATCTTGCTTCACGACAGTCCCGCAGTGAACATCTACGTGACAAACGGGACCTCAATACACTTAATCCTGTCAAATAGCGGAAGTCCAAAAACACACGTCGCCCCGTTCGCAGACAGCGATTCCGAAGTTCTGGAATGGGCAGCAAAGACGTTTGGTGGAGTGACGTCCTTCACCACAGCACGAGATCCCGCGATCATCACTTTCACCGGGATAACAGGTGCTCAGCGACCATCAACGTGTGACCTGCAGCCGGAAGCACAAGCAGATAAACAGTTCATTGATCTGAAGCTGACACTTCCATCTGATGAGCTGAAATCATGCCACACAGAGCTTTCTAAAGAACAACTGCACGTGATCAATATTCCTGATGACATCAAAATACGgAATGTATCTGTGCATTTACCACACAACTCTAAAGTGGTCCTTAGAGGTCCAGCAGGCACTGTGTGGAACATCGCCAATGATATTCAGTTACTGTCGAACAATCATATATCCTTCAAAGGGTTCAGTTTGCCTCCGAAGAAAAATATCTCAGATGACCCTAGAGAAATCAGGCAGAAGGCATTGTCATACTACAACAGCACTTCCGTCACAAGTTACTCTGAGATCCGCCTGAACGTGTCACACATCCAGCTGTGGATCAGGGACAGCACAAGCCCCTCAGTATCAGCAGAAGTGAAGCACACTACACCAGCACCCAGTACTTCTACACTTCAGATGCAGCTGTTCTCATCCCCAGACTACAGGTTGCCTCTGGATCCCAGCAGCAAAGTTCAGAGTGACAAGAGAGTCTATGCAGAGATCTCAACTGAGAGTTATGGAGAGATTTCCTTAAGCATTAAGATCAGCAGCTGTAAGGTTCGCTCCATGCAAGTGGTGATGCAAATGCCGTTCAAAGAGGAGGGGGCCTGTTACATTAAGGACTGTCCTAAGAGACTCAGCTTCTCCTTTGAGATGCTTCAGGACCTGCCGTCCAGCTCGTGGGAACTCGAATGTGCAGTTCAACTTTGTCATGGTAAAATGttttgtacaAACGAAATGCACGTCAAGAGGAGCTTGCAGGTCAAGCCATATATTCCAAACGCAAATCGCTGTTTTGAGTTCGGGCTCTCAGCTGTTCTAGGAATCGCGTTCGGGGGATTTCTGATCGGAGTTCTCCTCACTGGTGCTTTATGGTTCATTAAGATACGAACAGCTTATGAGGGAAGAGGTGGAGAGAGCAGCTCTAACAAGCCTTGCGATGATTTCCCCCTAGAAATAAGATGAAGCAGTTAAGGCATCCTGTGGCTCTGGGAATGAGATCAACGGCAGCCGAGCTCTCAGTCCTCTCTATATCTGGATGCCCGTGTGGTTTGACCAAACGGCAGCCAGTGCCCACCCACTCGTCTCCCTCAGAGAACAGCAGCGCCAACGCCAG

Function

NR:

description
PREDICTED: uncharacterized protein LOC107562335

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239534.1 True 4170 mRNA 0.42 14 29614719 29655049
XR_006251000.1 False 1982 transcript 0.50 15 29616999 29655061

Neighbor

gene id symbol gene type direction distance location
LOC122345545 LOC107728794,LOC107590009,LOC107696375,LOC107696371,LOC107578696,LOC108263699 coding downstream 279031 29325983 ~ 29335688 (-)
LOC122345544 ubr2,LOC107669566,LOC107696377 coding downstream 291034 29303143 ~ 29323685 (-)
brinp1 brinp1 coding downstream 344019 29174951 ~ 29270700 (-)
LOC122344834 LOC108430399,LOC107568487,LOC105913012,LOC103355419 coding downstream 669955 28943741 ~ 28944764 (-)
LOC122346138 astn2,LOC107675510,LOC107683760,LOC106563268,LOC106565912 coding downstream 931550 28337401 ~ 28683169 (-)
ak1 ak1,kad,LOC107704768,LOC107715674,LOC107674927 coding upstream 5957 29661018 ~ 29670185 (-)
gpsm1b LOC107741501,LOC107704761,LOC107562333,LOC107597941,LOC107674924,LOC107744057 coding upstream 18172 29673233 ~ 29698626 (-)
fam78ab fam78ab,fam78a,LOC107704739,LOC107562331,LOC107674928,LOC107745627,LOC107741498,LOC107597938 coding upstream 183578 29838639 ~ 29846990 (-)
prrc2b prrc2b,LOC107704672 coding upstream 204491 29859552 ~ 29880103 (-)
LOC122344958 LOC107690080,LOC107566862,LOC107728455 coding upstream 255851 29910912 ~ 29919495 (-)
G40083 NA non-coding downstream 1284243 28326897 ~ 28330476 (-)
G40081 NA non-coding downstream 1321782 28292726 ~ 28292937 (-)
G40079 pappaa,LOC107739977,LOC107558864,LOC107675511,LOC107556005,LOC107728218 non-coding downstream 1359512 28254921 ~ 28255207 (-)
G40076 pappaa,pappa,LOC107739977,LOC107675511,LOC107558864,LOC107728218,LOC107556005,LOC106563270 non-coding downstream 1368054 28246418 ~ 28246665 (-)
G40074 pappaa,LOC107558864,LOC107675511,LOC107739977,LOC107728218,LOC107556005 non-coding downstream 1371064 28242661 ~ 28243655 (-)
G40266 NA non-coding upstream 30067 29685128 ~ 29685727 (-)
G40268 LOC107741500,LOC107562332,LOC107704753 non-coding upstream 146133 29801194 ~ 29805802 (-)
LOC122344857 NA non-coding upstream 384393 30039454 ~ 30046148 (-)
LOC122345788 NA non-coding upstream 398551 30053612 ~ 30054797 (-)
G40422 NA non-coding upstream 450781 30105842 ~ 30106738 (-)
G40182 brinp1,LOC107715673,LOC107674904 other downstream 124515 29460585 ~ 29490204 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other downstream 288604 29323982 ~ 29326115 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other downstream 1350015 28255828 ~ 28264704 (-)
LOC122344874 NA other downstream 1719265 27886041 ~ 27895454 (-)
isca1 isca1,LOC107702919,LOC107662049 other downstream 2215978 27382921 ~ 27398741 (-)
LOC122344966 LOC107749532,LOC107566852,LOC107742171,LOC107565644,LOC107690083 other upstream 269641 29924702 ~ 29928675 (-)
rnf170 rnf170,LOC107721034,LOC107687247 other upstream 432905 30087966 ~ 30093576 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other upstream 935782 30590843 ~ 30613141 (-)
G40711 NA other upstream 975967 30631028 ~ 30733360 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other upstream 1134572 30789633 ~ 30792719 (-)

Expression


Co-expression Network