LOC122345419 (man1b1b,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425)


Basic Information

Item Value
gene id LOC122345419
gene name man1b1b,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 2270213 ~ 2277034 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239536.1
TGGAGGATTATTTGGAAAAGCCACAAGTTGCTAGTGTACTGTACAACACTCCTCCTTACAGCTGGTTTGTCTTCGTCTCCAGGAAATCAGTTGAAACCTGTTCCGAGCAAAATGGCTGCAATATGCTGCGTTTAACCCTCGAGGATTTTCAGACGCGCCGCTCGGAAAGTCGCATGGTGTTCGCCACAGTTGAAGAGTCGAATGGGATttttgtgagtgtgagtgatCGCTGGCGAGCTCTAGGCCCTTCAGTGATGCCTCGGACCGTCGTGAGATCCTGAGCCGATCAGAGCTCCGCTTTACAGAGCTGGATACTCCGCGTACTCCAGGAAGAGAGAAACCTGGCCACTGAGTTTATGAGCAGCCTGGAGAGAGACAGGGAATCATGCTGCCTCCGTCAAGAAGGGATTTTGTATCTCTGACTCTCAGCGAAAGTGGCAGCTACACCAACAGCAAGCAATGGCGGCGGCAGTCGTGCTGGAGAAAATGGAAACAGCTGTCCAGATTGCAGCGCAGCCTGATCCTGTTTACACTCATGCTGTTGTTGGTTTGTGGAATTGCCACATCTCCCACTCTTATAGGGCACTGGAGAGATGGTGTGGTAGCGGAGAACGAGAATGATGGAAAACAGCCATTTGTCGTCAACCTGAAAAATGAGTACAAGTCCATTCTTCACGAGCCACCCTCTGAGaaaaaggacTACCGTAGACGTGGACCTCCTGTCTTTCAGAACCGTtttcaaaccaaaacaaatgtttcGAGTCTGTTGGGAGTAGAAAATCAGGAACTGGACCTGAAGAATGCAGATAAAGGATCTGAAGGAGGAAAGCCAATCATTAGTTGGCGTGGAGCTGTGATAGAAGAAGAACAGGCATCTGATACTGACACCAAAGACACAGAAATCCAAGACGACGCAGCTTCATTAGCACttgcTGAGAGCAGATTGGAGACTGTAAGGGAAGCCTTAAGACATGCCTGGAAGGGTTACAAGAACTTTGCTTGGGGTCACGATGAGCTAAAACCAATCTCTAAATCATATGGAGAGTGGTTTGGACTTGGGCTGACCCTAATTGATGCTCTGGACACCATGTGGATCTTGGGTCTCAAAGAGGAGTTTGCAGAGGCCAGGGAGTGGGTGGCCAAAGAGCTCTCCTTCGATAAGAACGTGGATGTTAATCTGTTTGAGAGCACCATTCGTATACTGGGTGGCCTTCTGAGTACTTACCATCTCACCGGAGACTCCTTGTTCCTGGAAAAAGCTAAAGATATTGGCTCCAGACTGATGCCCGCCTTTACCACTGCCTCAAAAATCCCCTATTCGGATGTGAATATAGGCAAGGGGACGGCTCATCCACCGCAGTGGACTTCAGACAGTACCGTAGCTGAGGTCACCAGCATTCAGCTAGAATTCAGAGAGCTCAGTCGACTTACCGGAGACCCCAAATACAAGCTGGCTGTAATGGAGGTGATGAAGCAGGTGCATAATTTGGATGGAAAGCAAGATGGGTTAGTGCCGATGTTTATCAATACCAACAACGGGCTGTTCACGCATCAGGGCACTTACACATTGGGCGCCAGGGCTGACAGCTACTACGAGTACCTACTGAAGCAGTGGATACAAGGAGGCGAGACTGAGAATGAATTGCTGGATGACTACCTCCTGGCTGTGGAAGGTGTGAAGAAAAACCTCCTGAAAAAGTCCACTCCTTCTGGCCTTACATTTGTAGGAGAACTGTCCCATGGCCACTTCAGTCCCAAAATGGACCACTTGGTTTGTTTCCTGCCTGGCACACTTGCACTTGGGGCACATTACGGCCTTCCTGCTGATCACATGGAGCTGGCAAAACAGCTGATAGAGACTTGCTACCAGATGTACGCCCAGATGGAGACGGGTCTGAGCCCGGAGATAGCTCATTTCAACATGCATGAGAGCAGCACACAGGATGTAGATGTAAAGATTGCAGACCGACACAACCTTCAAGTGCCAGAGACTGTAGAGAGCCTCTTCTACATGTACAGGTTCACTAAGGATAAGAAGTACCAGCAGTGGGGCTGGGAGATCCTTCAGAACTTCAATAAGTACACAAGGGTTCCCACCGGAGGTTATACGTCTATAAACAACGTTCGTGACCCAGCCAATCCCAATCCTCGAGACAAGATGGAGAGCTTCTTCCTGGGTGAGACACTCAAGTACTTCTACCTGCTGTTTTCCAATGACTCAGACCTTATCAGCTTAGACAAGTACATCTTCAACACTGAAGCCCATCCTCTGCCAATATGGCCACAAGCAGAGTGAAGCACCCGCGAGCGCACGTGCATAACCAAACACACCTCTCTCAGGGCCATGAACACATTTGATATCCAAACTGCCATGTTTTTCTACACTATGAACTCTTTGTAATCGAAAGTAACTAACtggtgaaaaaaaagttaaaatagccATGACAGAAACTGTTTGTAGATGTGTAGTTTCTGATTGTACTAGTTATCTGTATGTTTCTATTAATAGAGTTTCTGAATTTTTTACTCTATTTATGCTATCGTGATGCTGTCGATCAGCTATTGAATCATTATGTGCAGTCTTTTAGCCCAAGCACACGGACAAAAATGTTCATACTGTGAAACCGTATGGGGACTGCAAGCACTTTATGGTGTGTTTTGAGGTTttagtgt
>XM_043239537.1
GATCCTGAGCCGATCAGAGCTCCGCTTTACAGAGCTGGATACTCCGCGTACTCCAGGAAGAGAGGTGAATGACTTATTGATGTCCGATCTTTGAGCTTAATCCTGCGTGAACATAAACGGCAGAGAAAAGTAACCCGAAACCTGGCCACTGAGTTTATGAGCAGCCTGGAGAGAGACAGGGAATCATGCTGCCTCCGTCAAGAAGGGATTTTGTATCTCTGACTCTCAGCGAAAGTGGCAGCTACACCAACAGCAAGCAATGGCGGCGGCAGTCGTGCTGGAGAAAATGGAAACAGCTGTCCAGATTGCAGCGCAGCCTGATCCTGTTTACACTCATGCTGTTGTTGGTTTGTGGAATTGCCACATCTCCCACTCTTATAGGGCACTGGAGAGATGGTGTGGTAGCGGAGAACGAGAATGATGGAAAACAGCCATTTGTCGTCAACCTGAAAAATGAGTACAAGTCCATTCTTCACGAGCCACCCTCTGAGaaaaaggacTACCGTAGACGTGGACCTCCTGTCTTTCAGAACCGTtttcaaaccaaaacaaatgtttcGAGTCTGTTGGGAGTAGAAAATCAGGAACTGGACCTGAAGAATGCAGATAAAGGATCTGAAGGAGGAAAGCCAATCATTAGTTGGCGTGGAGCTGTGATAGAAGAAGAACAGGCATCTGATACTGACACCAAAGACACAGAAATCCAAGACGACGCAGCTTCATTAGCACttgcTGAGAGCAGATTGGAGACTGTAAGGGAAGCCTTAAGACATGCCTGGAAGGGTTACAAGAACTTTGCTTGGGGTCACGATGAGCTAAAACCAATCTCTAAATCATATGGAGAGTGGTTTGGACTTGGGCTGACCCTAATTGATGCTCTGGACACCATGTGGATCTTGGGTCTCAAAGAGGAGTTTGCAGAGGCCAGGGAGTGGGTGGCCAAAGAGCTCTCCTTCGATAAGAACGTGGATGTTAATCTGTTTGAGAGCACCATTCGTATACTGGGTGGCCTTCTGAGTACTTACCATCTCACCGGAGACTCCTTGTTCCTGGAAAAAGCTAAAGATATTGGCTCCAGACTGATGCCCGCCTTTACCACTGCCTCAAAAATCCCCTATTCGGATGTGAATATAGGCAAGGGGACGGCTCATCCACCGCAGTGGACTTCAGACAGTACCGTAGCTGAGGTCACCAGCATTCAGCTAGAATTCAGAGAGCTCAGTCGACTTACCGGAGACCCCAAATACAAGCTGGCTGTAATGGAGGTGATGAAGCAGGTGCATAATTTGGATGGAAAGCAAGATGGGTTAGTGCCGATGTTTATCAATACCAACAACGGGCTGTTCACGCATCAGGGCACTTACACATTGGGCGCCAGGGCTGACAGCTACTACGAGTACCTACTGAAGCAGTGGATACAAGGAGGCGAGACTGAGAATGAATTGCTGGATGACTACCTCCTGGCTGTGGAAGGTGTGAAGAAAAACCTCCTGAAAAAGTCCACTCCTTCTGGCCTTACATTTGTAGGAGAACTGTCCCATGGCCACTTCAGTCCCAAAATGGACCACTTGGTTTGTTTCCTGCCTGGCACACTTGCACTTGGGGCACATTACGGCCTTCCTGCTGATCACATGGAGCTGGCAAAACAGCTGATAGAGACTTGCTACCAGATGTACGCCCAGATGGAGACGGGTCTGAGCCCGGAGATAGCTCATTTCAACATGCATGAGAGCAGCACACAGGATGTAGATGTAAAGATTGCAGACCGACACAACCTTCAAGTGCCAGAGACTGTAGAGAGCCTCTTCTACATGTACAGGTTCACTAAGGATAAGAAGTACCAGCAGTGGGGCTGGGAGATCCTTCAGAACTTCAATAAGTACACAAGGGTTCCCACCGGAGGTTATACGTCTATAAACAACGTTCGTGACCCAGCCAATCCCAATCCTCGAGACAAGATGGAGAGCTTCTTCCTGGGTGAGACACTCAAGTACTTCTACCTGCTGTTTTCCAATGACTCAGACCTTATCAGCTTAGACAAGTACATCTTCAACACTGAAGCCCATCCTCTGCCAATATGGCCACAAGCAGAGTGAAGCACCCGCGAGCGCACGTGCATAACCAAACACACCTCTCTCAGGGCCATGAACACATTTGATATCCAAACTGCCATGTTTTTCTACACTATGAACTCTTTGTAATCGAAAGTAACTAACtggtgaaaaaaaagttaaaatagccATGACAGAAACTGTTTGTAGATGTGTAGTTTCTGATTGTACTAGTTATCTGTATGTTTCTATTAATAGAGTTTCTGAATTTTTTACTCTATTTATGCTATCGTGATGCTGTCGATCAGCTATTGAATCATTATGTGCAGTCTTTTAGCCCAAGCACACGGACAAAAATGTTCATACTGTGAAACCGTATGGGGACTGCAAGCACTTTATGGTGTGTTTTGAGGTTttagtgt
>XM_043239538.1
TGGAGGATTATTTGGAAAAGCCACAAGTTGCTAGTGTACTGTACAACACTCCTCCTTACAGCTGGTTTGTCTTCGTCTCCAGGAAATCAGTTGAAACCTGTTCCGAGCAAAATGGCTGCAATATGCTGCGTTTAACCCTCGAGGATTTTCAGACGCGCCGCTCGGAAAGTCGCATGGTGTTCGCCACAGTTGAAGAGTCGAATGGGATttttgtgagtgtgagtgatCGCTGGCGAGCTCTAGGCCCTTCAGTGATGCCTCGGACCGTCGTGAGATCCTGAGCCGATCAGAGCTCCGCTTTACAGAGCTGGATACTCCGCGTACTCCAGGAAGAGAGAAACCTGGCCACTGAGTTTATGAGCAGCCTGGAGAGAGACAGGGAATCATGCTGCCTCCGTCAAGAAGGGATTTTGTATCTCTGACTCTCAGCGAAAGTGGCAGCTACACCAACAGCAAGCAATGGCGGCGGCAGTCGTGCTGGAGAAAATGGAAACAGCTGTCCAGATTGCAGCGCAGCCTGATCCTGTTTACACTCATGCTGTTGTTGGTTTGTGGAATTGCCACATCTCCCACTCTTATAGGGCACTGGAGAGATGGTGTGGTAGCGGAGAACGAGAATGATGGAAAACAGCCATTTGTCGTCAACCTGAAAAATGAGTACAAGTCCATTCTTCACGAGCCACCCTCTGAGAACCGTtttcaaaccaaaacaaatgtttcGAGTCTGTTGGGAGTAGAAAATCAGGAACTGGACCTGAAGAATGCAGATAAAGGATCTGAAGGAGGAAAGCCAATCATTAGTTGGCGTGGAGCTGTGATAGAAGAAGAACAGGCATCTGATACTGACACCAAAGACACAGAAATCCAAGACGACGCAGCTTCATTAGCACttgcTGAGAGCAGATTGGAGACTGTAAGGGAAGCCTTAAGACATGCCTGGAAGGGTTACAAGAACTTTGCTTGGGGTCACGATGAGCTAAAACCAATCTCTAAATCATATGGAGAGTGGTTTGGACTTGGGCTGACCCTAATTGATGCTCTGGACACCATGTGGATCTTGGGTCTCAAAGAGGAGTTTGCAGAGGCCAGGGAGTGGGTGGCCAAAGAGCTCTCCTTCGATAAGAACGTGGATGTTAATCTGTTTGAGAGCACCATTCGTATACTGGGTGGCCTTCTGAGTACTTACCATCTCACCGGAGACTCCTTGTTCCTGGAAAAAGCTAAAGATATTGGCTCCAGACTGATGCCCGCCTTTACCACTGCCTCAAAAATCCCCTATTCGGATGTGAATATAGGCAAGGGGACGGCTCATCCACCGCAGTGGACTTCAGACAGTACCGTAGCTGAGGTCACCAGCATTCAGCTAGAATTCAGAGAGCTCAGTCGACTTACCGGAGACCCCAAATACAAGCTGGCTGTAATGGAGGTGATGAAGCAGGTGCATAATTTGGATGGAAAGCAAGATGGGTTAGTGCCGATGTTTATCAATACCAACAACGGGCTGTTCACGCATCAGGGCACTTACACATTGGGCGCCAGGGCTGACAGCTACTACGAGTACCTACTGAAGCAGTGGATACAAGGAGGCGAGACTGAGAATGAATTGCTGGATGACTACCTCCTGGCTGTGGAAGGTGTGAAGAAAAACCTCCTGAAAAAGTCCACTCCTTCTGGCCTTACATTTGTAGGAGAACTGTCCCATGGCCACTTCAGTCCCAAAATGGACCACTTGGTTTGTTTCCTGCCTGGCACACTTGCACTTGGGGCACATTACGGCCTTCCTGCTGATCACATGGAGCTGGCAAAACAGCTGATAGAGACTTGCTACCAGATGTACGCCCAGATGGAGACGGGTCTGAGCCCGGAGATAGCTCATTTCAACATGCATGAGAGCAGCACACAGGATGTAGATGTAAAGATTGCAGACCGACACAACCTTCAAGTGCCAGAGACTGTAGAGAGCCTCTTCTACATGTACAGGTTCACTAAGGATAAGAAGTACCAGCAGTGGGGCTGGGAGATCCTTCAGAACTTCAATAAGTACACAAGGGTTCCCACCGGAGGTTATACGTCTATAAACAACGTTCGTGACCCAGCCAATCCCAATCCTCGAGACAAGATGGAGAGCTTCTTCCTGGGTGAGACACTCAAGTACTTCTACCTGCTGTTTTCCAATGACTCAGACCTTATCAGCTTAGACAAGTACATCTTCAACACTGAAGCCCATCCTCTGCCAATATGGCCACAAGCAGAGTGAAGCACCCGCGAGCGCACGTGCATAACCAAACACACCTCTCTCAGGGCCATGAACACATTTGATATCCAAACTGCCATGTTTTTCTACACTATGAACTCTTTGTAATCGAAAGTAACTAACtggtgaaaaaaaagttaaaatagccATGACAGAAACTGTTTGTAGATGTGTAGTTTCTGATTGTACTAGTTATCTGTATGTTTCTATTAATAGAGTTTCTGAATTTTTTACTCTATTTATGCTATCGTGATGCTGTCGATCAGCTATTGAATCATTATGTGCAGTCTTTTAGCCCAAGCACACGGACAAAAATGTTCATACTGTGAAACCGTATGGGGACTGCAAGCACTTTATGGTGTGTTTTGAGGTTttagtgt

Function

symbol description
man1b1b Predicted to enable mannosyl-oligosaccharide 1,2-alpha-mannosidase activity. Predicted to be involved in N-glycan processing and ubiquitin-dependent ERAD pathway. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be integral component of membrane. Predicted to be active in endoplasmic reticulum and membrane. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human MAN1B1 (mannosidase alpha class 1B member 1).

NR:

description
PREDICTED: endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase-like

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity molecular_function

KEGG:

id description
K23741 MAN1B, MNS3; endoplasmic reticulum Man9GlcNAc2 1,2-alpha-mannosidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239536.1 True 2673 mRNA 0.48 14 2270213 2277034
XM_043239537.1 False 2473 mRNA 0.47 14 2270486 2277034
XM_043239538.1 False 2634 mRNA 0.47 14 2270213 2277034

Neighbor

gene id symbol gene type direction distance location
LOC122346086 LOC107587426,LOC107757959,LOC107709681,LOC107560220,LOC107681216,LOC107560224,LOC107709689 coding upstream 5628 2249658 ~ 2264585 (+)
LOC122346081 LOC107681222,LOC107709689,LOC107560224,LOC107757958,LOC107587469,LOC107690695 coding upstream 62668 2178583 ~ 2207545 (+)
LOC122346053 edc4,LOC107733561,LOC107726309 coding upstream 352761 1906927 ~ 1917452 (+)
LOC122346055 nutf2l,LOC107592026,LOC107748755,LOC107697171,LOC107688399,LOC107593625,LOC107739636,LOC108410494,LOC103027823 coding upstream 369788 1899595 ~ 1900425 (+)
LOC122345241 kat2b,LOC107748684,LOC107696888,LOC107593605,LOC107592021,LOC107739562,LOC107688328,LOC108411559 coding upstream 378109 1882015 ~ 1892104 (+)
LOC122345384 H2AFV,h2afvb,LOC107386217,LOC105007341,LOC107668744 coding downstream 251468 2528502 ~ 2531593 (+)
LOC122345789 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 coding downstream 439979 2717013 ~ 2725424 (+)
hk2 hk2,LOC107668748,LOC107755855,LOC106585103,LOC108255852,LOC108411364,LOC107708252,LOC107599625 coding downstream 482321 2759355 ~ 2812420 (+)
pebp1 pebp1 coding downstream 1140870 3417904 ~ 3422144 (+)
suds3 suds3,LOC107569732,LOC107708245 coding downstream 1220215 3497249 ~ 3505203 (+)
G32702 NA non-coding upstream 26326 2243667 ~ 2243887 (+)
G32694 NA non-coding upstream 192780 2076954 ~ 2077433 (+)
G32693 NA non-coding upstream 194168 2074389 ~ 2076045 (+)
LOC122344883 NA non-coding upstream 240887 2023363 ~ 2029326 (+)
G32649 NA non-coding upstream 271533 1998179 ~ 1998680 (+)
G32737 NA non-coding downstream 141343 2418377 ~ 2420831 (+)
G32765 NA non-coding downstream 301552 2578586 ~ 2579783 (+)
G32749 NA non-coding downstream 321216 2598250 ~ 2599639 (+)
G32770 figla non-coding downstream 331182 2608216 ~ 2609601 (+)
G32798 NA non-coding downstream 589132 2866166 ~ 2867373 (+)
G32706 LOC107560224,LOC107681222,LOC107709689,LOC107690695,LOC107757958,LOC107587469 other upstream 2019 2265145 ~ 2268194 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other upstream 251063 2010217 ~ 2019150 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other upstream 364714 1900627 ~ 1905499 (+)
G32620 prrc2b,LOC107704672,LOC107562325 other upstream 427200 1835148 ~ 1843013 (+)
G32611 prrc2b,LOC107704672 other upstream 444099 1822654 ~ 1826114 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other downstream 350050 2627084 ~ 2649361 (+)
tbx1 tbx1,LOC107755862,LOC107699917,LOC107708247 other downstream 1051766 3328800 ~ 3343070 (+)
G33015 NA other downstream 1328152 3605186 ~ 4144396 (+)
G33174 NA other downstream 2345473 4622507 ~ 4623060 (+)
fbrsl1 LOC107656817,LOC107600129 other downstream 2367067 4644101 ~ 4902403 (+)

Expression


Co-expression Network