apooa (apoo)


Basic Information

Item Value
gene id apooa
gene name apoo
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 31702453 ~ 31711737 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239558.1
TGAACGTCTGGTCGCAGCTCGatataaaagaagaagaagaagaagaccgGACCATGTACAAGGTTGGAGGGCTCGCGGGTGTCTCCGGCGCTCTGGGCCTGATTTCTGCCTCCGTGCTGGCGGCCTCCGCCGACGCCGACGACAAACCCAGCACCGCTCTGAGCGTAGATGAGCTGTCTCTCTACACGACACGGCCGCAGAGCTTCCAGCCCGAGGAGCCCGAGAGAGGACCGGTGGAGGAGAGCGTGGCCAGACTGAGAGAGCTGACGGAGCCCTACACCTCCTGGTGTCAGAAAATGGCCAGCTCGGTCACACAGACAGCGCAgGGCGTCTATGGGACGGTGAAGCCCAAGGTCGACAGCACTGTAGAGTTCGGACAGAACAGTTACGCCTACTTGAAGAACCCTCCCCCCGAGTTTTACCCCAGAGCCGGAGTCATTGGATTTGCCGGGATCCTGGGCCTTTTCCTCGGAAGAGGCTCCAGACTGAAGAAGCTGATCTACCCCACCGCTCTAATGGCTGTGTCCGTGTCCATGTATTATCCTCAAGAGGCCGTGAGCGTCACAAAGAACACAGGAGACGCTGTATACGACTGGGCGCTTCAGGCTTATGTTGCTTTGGAGAAACTCATCAAAGACAGACCTGCCTCAAAGAAAgATCAGGCGGAGAGTTCAAGCGGGGAGACCAAAGCTTAGGCACGCCGTCGGCTCTCAGATCGTTTCTCTCACAGCGATGCACGATCTCCATCCTTTGCTCACGTTCACTACCTGCTTTTGCACTAGCCACTTCCTCTTTCATCTGACGGGAGTTAGTGGCCTGACTGGAAAGTTATGAACAAACTACTGGGATTGTATTAAAAACATCGTTAAAATAG
>XM_043239559.1
ACGTCTGGTCGCAGCTCGatataaaagaagaagaagaagaagaccgGACCATGTACAAGGTTGGAGGGCTCGCGGGTGTCTCCGGCGCTCTGGGCCTGATTTCTGCCTCCGTGCTGGCGGCCTCCGCCGACGCCGACGACAAACCCAGCACCGCTCTGAGCGTAGATGAGCTGTCTCTCTACACGACACGGCCGCAGAGCTTCCAGCCCGAGGAGCCCGAGAGAGGACCGGTGGAGGAGAGCGTGGCCAGACTGAGAGAGCTGACGGAGCCCTACACCTCCTGGTGTCAGGGCGTCTATGGGACGGTGAAGCCCAAGGTCGACAGCACTGTAGAGTTCGGACAGAACAGTTACGCCTACTTGAAGAACCCTCCCCCCGAGTTTTACCCCAGAGCCGGAGTCATTGGATTTGCCGGGATCCTGGGCCTTTTCCTCGGAAGAGGCTCCAGACTGAAGAAGCTGATCTACCCCACCGCTCTAATGGCTGTGTCCGTGTCCATGTATTATCCTCAAGAGGCCGTGAGCGTCACAAAGAACACAGGAGACGCTGTATACGACTGGGCGCTTCAGGCTTATGTTGCTTTGGAGAAACTCATCAAAGACAGACCTGCCTCAAAGAAAgATCAGGCGGAGAGTTCAAGCGGGGAGACCAAAGCTTAGGCACGCCGTCGGCTCTCAGATCGTTTCTCTCACAGCGATGCACGATCTCCATCCTTTGCTCACGTTCACTACCTGCTTTTGCACTAGCCACTTCCTCTTTCATCTGACGGGAGTTAGTGGCCTGACTGGAAAGTTATGAACAAACTACTGGGATTGTATTAAAAACATCGTTAAAATAG
>XR_006251005.1
TGAACGTCTGGTCGCAGCTCGatataaaagaagaagaagaagaagaccgGACCATGTACAAGGTTGGAGGGCTCGCGGGTGTCTCCGGCGCTCTGGGCCTGATTTCTGCCTCCGTGCTGGCGGCCTCCGCCGACGCCGACGACAAACCCAGCACCGCTCTGAGCGTAGATGAGCTGTCTCTCTACACGACACGGCCGCAGAGCTTCCAGCCCGAGGAGCCCGAGAGAGGACCGGTGGAGGAGAGCGTGGCCAGACTGAGAGAGCTGACGGAGCCCTACACCTCCTGGTGTCAGAAAATGGCCAGCTCGGTCACACAGACAGCGCAgGGCGTCTATGGGACGGTGAAGCCCAAGGTCGACAGCACTGTAGAGTTCGGACAGAACAGTTACGCCTACTTGAAGAACCCTCCCCCCGAGTTTTACCCCAGAGCCGGAGTCATTGGATTTGCCGGGATCCTGGGCCTTTTCCTCGGAAGAGGCTCCAGACTGAAGAAGCTGATCTACCCCACCGCTCTAATGGCTGTGTCCGTGTCCATGTATTATCCTCAAGAGGCCGTGAGCGTCACAAAGAACACAGGAGACGCTGTATACGACTGGGCGCTTCAGGCTTATGTTGCTTTGGAGAAACTCATCAAAGACAGACCTGCCTCAAAGAAAgATCAGGCGGAGAGTTCAAGCGGGGAGACCAAAGCTTAGGTACAAAATGTCAAGCAAACTGGGATATACGACATGAACCCTTTCCCAGCTGTGCTGCACTAAGATCTGTTCACACATAAAATCTGCACGCCGTCGGCTCTCAGATCGTTTCTCTCACAGCGATGCACGATCTCCATCCTTTGCTCACGTTCACTACCTGCTTTTGCACTAGCCACTTCCTCTTTCATCTGACGGGAGTTAGTGGCCTGACTGGAAAGTTATGAACAAACTACTGGGATTGTATTAAAAACATCGTTAAAATAG

Function

symbol description
apoo Involved in cristae formation. Located in several cellular components, including Golgi membrane; endoplasmic reticulum membrane; and mitochondrion. Is integral component of mitochondrial inner membrane. Part of MICOS complex.

NR:

description
MICOS complex subunit MIC26 isoform X1

GO: NA

KEGG:

id description
K24625 APOO; MICOS complex subunit MIC26

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239558.1 False 874 mRNA 0.55 10 31702453 31711737
XM_043239559.1 False 838 mRNA 0.55 9 31702453 31711734
XR_006251005.1 True 959 transcript 0.54 10 31702453 31711737

Neighbor

gene id symbol gene type direction distance location
srrt srrt,LOC107665251,LOC107591506,LOC107725089,LOC107734366 coding downstream 18873 31674315 ~ 31683580 (-)
LOC122345089 NA coding downstream 30845 31668017 ~ 31671608 (-)
si:ch211-283g2.2 NA coding downstream 34838 31661478 ~ 31667615 (-)
si:ch211-283g2.1 si:ch211-283g2.1,LOC107734371,LOC107591505,LOC107654320,LOC107562197,LOC107667012,LOC108437645 coding downstream 42791 31651505 ~ 31659662 (-)
LOC122344717 LOC107664759,LOC107725124,LOC107654315,LOC107734362,LOC107562201 coding downstream 88623 31600225 ~ 31613830 (-)
zgc:153704 zgc:153704,LOC107591480,LOC107562205,LOC107725160,LOC107665866,LOC107654290 coding upstream 21721 31733458 ~ 31735951 (-)
LOC122345662 ralgps1,LOC107666038,LOC107557582,LOC107725136,LOC107654291 coding upstream 48199 31759936 ~ 31857602 (-)
zbtb43 zbtb43,LOC107715540,LOC107668077,LOC107725105,LOC107654302 coding upstream 148159 31859896 ~ 31864890 (-)
lmx1ba lmx1b,lmx1ba,LOC107591520,LOC107668223,LOC107725103,LOC107654328,LOC107557569,LOC105902565 coding upstream 184066 31895803 ~ 31934473 (-)
mvb12ba mvb12ba,mvb12b,LOC107591487,LOC107666228,LOC107654329,LOC107725155,LOC107557586 coding upstream 232118 31943855 ~ 31960848 (-)
G41023 NA non-coding downstream 635 31655583 ~ 31701818 (-)
G41018 LOC107734365 non-coding downstream 6665 31691866 ~ 31695788 (-)
G41019 prdx4,LOC107665442,LOC107591478,LOC107734341,LOC107654298 non-coding downstream 17617 31683968 ~ 31684836 (-)
G41034 NA non-coding downstream 53841 31646858 ~ 31648612 (-)
G40995 NA non-coding downstream 196356 31423085 ~ 31506097 (-)
G41037 NA non-coding upstream 614 31712351 ~ 31732259 (-)
G41047 NA non-coding upstream 12005 31723742 ~ 31904787 (-)
G41051 NA non-coding upstream 85972 31797709 ~ 31798268 (-)
G41064 NA non-coding upstream 264199 31975936 ~ 31977051 (-)
G41065 NA non-coding upstream 265977 31977714 ~ 31978466 (-)
LOC122344987 LOC107591496,LOC107663763,LOC107725109,LOC107734348,LOC107563429,LOC107654309 other downstream 352004 31331349 ~ 31350449 (-)
G40752 hspa5,LOC107686379,LOC107743071,LOC107687227,LOC107567952,LOC107734417,LOC107734415,LOC107686377 other downstream 876095 30817732 ~ 30826358 (-)
G40713 lzts3,LOC107567954,LOC107687254,LOC107574519,LOC795227,LOC107665914 other downstream 909734 30789633 ~ 30792719 (-)
G40711 NA other downstream 969093 30631028 ~ 30733360 (-)
fubp3 fubp3,LOC107689604,LOC107687236,LOC106566971 other downstream 1089312 30590843 ~ 30613141 (-)
G41035 LOC107734367,LOC107665727,LOC107725151,LOC107591476,LOC107654325,LOC563292 other upstream 9533 31721270 ~ 31722906 (-)
tnca zmp:0000000846,LOC107715542,LOC107557573,LOC107591511,LOC102306937,LOC107725145 other upstream 402159 32113896 ~ 32174064 (-)
LOC122346090 LOC107704013,LOC107725152,LOC107748063,LOC107654332,LOC107557589,LOC107594564 other upstream 502294 32214031 ~ 32293782 (-)
LOC122346085 LOC107748069,LOC107679343,LOC107594586 other upstream 571800 32283537 ~ 32314631 (-)
LOC122345737 egflam,LOC107704151,LOC107667876,LOC107725173,LOC107725080,LOC107564362 other upstream 1026680 32738417 ~ 32757869 (-)

Expression


Co-expression Network