mtmr8 (LOC107672736,LOC107746239,LOC107597259,LOC107741196,LOC107557114,LOC107663233)


Basic Information

Item Value
gene id mtmr8
gene name LOC107672736,LOC107746239,LOC107597259,LOC107741196,LOC107557114,LOC107663233
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11852291 ~ 11860972 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239567.1
CAGCTGACATAATTGTAGTCTTCATGTCAGGGAAGAACGCAGCAACATAATACGAGTTCCTCAAACAAACATGATAACAGCTAAACATCGAAAGTGTAACGTGGACATTTGCATgataaacaactgaaaacatGGAGCACATTATAACGCCAAAGGTGGAGTATGTGAAACTACTAAACAGGTTCCCTGAAAAGAAGTCAGCTTTGGGGACGCTCTATTTGACTGCTACTCATCTTATCTATGTGGAACAAACTAACGACGCACGCACAGAAACATGGGTGCTGCATCATCACATCACGTCAGTAGAGAAGCTTCCGTTAACTGCATCCGGTTGTCCACTCCTGATCCGCTGTAAAACCTTCCAGCTGCTTCATCTGCTGttccaaagagagagagattgtcaGGATGTCTATCAGTCACTTGTGCGCCTGTCTCAACCAGttaAAGAAGAGGAGCTGTATGCCTTTCTCTATAATCCACACCAAACCGAGGAGGACAGGAGGCAGGGTTGGGAATTCATCAGTGTGGCCAACGACTTCAACAGGATGGGTCTCTCCAATGAATATTGGGAAATCAGCCACCTCAACAAGAACTTTGAGaTCTGTAGCACTTATCCATCTATCCTAGGACTGCCTAAAAACGCCAGTGGTGCAGTTATAACAGGCAGTGCCAAGTTTAGGAGCCGAGGGCGATTGCCTGTTCTGTCTTACTATCACAAAGACACTAAGGCTGTGATCTGTCGCTGCAGTCAGCCTTTGTCAGGTTTGACGTCTCGCTGTGTGGAAGACGAGCAGATGCTTCAGGCCATCAGCCAAGCGAACCCCAACTGTCCTTTTATATATGTAGTGGACACACGGCCGAAGTTGAACGCAATGGCCAACCGCGCAGCTGGTAAAGGCTATGAGAATGAGGACAACTACTCCAATATCAGGTTCCAGTTCCAAGGAATTGAAAACATCCACGTCATGAGAAGCAGCCTACAAAAATTGCTGGAGGTGTGCACTATGAAGTCTCCTTCCATGAGTGACTACTTGACAGGTTTGGAGAATTCTGGCTGGTTGAGGCACATCAAATCTGTAATGGATGCAGGCGTGTTCCTAGCCAAGGCTGTATGTGAAGAGAAGGCGAGTGTGTTAGTGCATTGTTCTGACGGTTGGGACAGAACGGCTCAGGTGTGCTCTTTGGCTTGCATACTGCTGGACCCTTACTACAGAACTATTAAAGGCCTCATGgtTTTAATAGAAAAGGAGTGGATCTCTTTTGGTCATAAATTCAGTCACAGGTGTGGCCATCTGGACACTGACTCTAAAGAAGTGTCTCCGGTCTTCACCCAGTTCCTGGAGTGTGTGTGGCAGCTGTCTGAGCAATttccctgtgtgtttgagttcaacGAACGTTACCTAATAGAGATACACAATCAAGTCTACGCCTGTCAGTATGGAAACTTCATCGGCAATTGTCAGAAAGAGAGGCTGGACATGAGGTTGCACGAAAAGACGTTTTCCTTGTGGCCACATCTTCTGAAAAATCAGCATCTGTATCGAAACCCCTTGTACCGGCGTTCATTAGAGAGTACACTTTTGAGACCCAGTACTTTGCCACTGCACTTCAAGTTCTGGTGTGGGATGTATAACCACTACGAGAGAGGCATGCATCCAAAACAGTCTGTTCTAGACCAACTGCTCTCTCTCACGCAGAAGCAAGTGGAAGGAGAGAGAACCATGACTGAATTACAGCGAcAGCTGGCTGTTGCAGATGGAGTGCTCCCCGATCCATCCGGACCAATCAACACACCTGCCGAACAGGACCGTCCAAGCAAGAAGACTCCCACCACTCCTGTTGTCCAATCAAACGGAAGCTGCGCTCCTTTGATTAATGGAGACACAGAGGAGGCGGGCCCAGGAGTTGAAAGGTGCAATGAGAAAGAAGGGGCGGAGCCAGCAGCCACAGAACACGATCTGACCTCTTTTGAGGACAAACCTGTTTCTGTGGAAACAGAACATTCCAAAGAGGAGGTACAAGAATCCTCTTGAGTCTCCATAGTAACAGAACGGACATTTTGACTGAGACCCCAAAGAACAAATGTCCTGATTATTGAAAAGATGCATGCAGTGCTGTTTTCACGGTGAAAGCTGCAGCTCGCCAGTCTGtgatttgtttatattgttgtttattagATTTCTCAAGCACTGGGTGGATTCTTGTTCCCTGTTATGTCTGATCTGCACATTTCTGCaatgttctttgtttttgtggAGTTAAGTGTGCTTGTTGGCCTTCAGACCATGAGGATTGAAGCTACATGCTTTGATTGTAGGCACTTAGAATCAtctacattttgtttaaatgccatTCTGATCAAATTTGGCCTTATTCGTTGTCTGGtagatgtttaaaaatgtcttttagtaATACTTGTGTAGTACGTTTGAAAGGCAGACTGATGCTGATTTATGCAGTCGCATCTGATGTGAAATTCAAAGGGAACATACTGTTAAAACAGGGAACaaattgattctttttttttgtacaaagggctcagtattatttttgtggtaTTACTTTTTGCAAACGCTgttcattttttcataaaacagaACGCTGCTGATTGATTGCAATAGGATGCCACATTGTTTGATGccaaaaaataatatgaagcacataaaaaaaattgaggaATATGACTTACGTCCTTTTAAGCAagccttttaaaatgcatgtagtTTTACAAAgcaatattgttttaatgatgtctaCTGGATGTTTATTTCTCATAGATGTGGCAAAGTTTTGACAGCTTTAGTTCTAATGTTCAACTTCTTTAACCCTGGCTGCTATGGAGCTCCAGACAagtttttgtgtaaaatgcaaaaaaaaaaaaaaaaaagcatttgtttacattattatttttgtattaaattagcaaaaaaatcCATTGATTAAACGTATAGCAATAGTCAGAAGGGAATTTTGAGATAAGAAATTAGGCGGATACTGCAGAAAATGACTGGTTACATCACATTTAAAGCTGTTTCCAAAACTGAGAAAATAACTGTGTAATAACTGTGTTCGCTCGTTTTATACATGCTTGTTTTGATCATTGCACTGTTTTGTACCCCTTTTGTACACCATTcagattttctttaaataaatattaattttagtcAA

Function

NR:

description
myotubularin-related protein 8-like isoform X2

GO:

id name namespace
GO:0016311 dephosphorylation biological_process
GO:0005635 nuclear envelope cellular_component
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K18083 MTMR6_7_8; myotubularin-related protein 6/7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239567.1 True 3168 mRNA 0.42 14 11852291 11860972

Neighbor

gene id symbol gene type direction distance location
zc4h2 zc4h2,LOC107663226,LOC107557113,LOC107597258,LOC107672730,LOC107746238 coding upstream 7022 11840476 ~ 11845269 (+)
las1l LOC107672706,LOC107746236,LOC107663224,LOC107741192,LOC107557109 coding upstream 28680 11817352 ~ 11823611 (+)
gpr83 si:dkey-27p18.2,LOC107746247,LOC107672928,LOC107741287,LOC107597348,LOC107663210,LOC107575892 coding upstream 127818 11717560 ~ 11724473 (+)
LOC122344640 LOC107721539 coding upstream 148772 11701042 ~ 11703519 (+)
LOC122345658 NA coding upstream 152772 11689917 ~ 11699519 (+)
asb12a asb12a,LOC107746240,LOC107672747,LOC107557116,LOC107741197,LOC107663228 coding downstream 72 11861044 ~ 11864442 (+)
amer1 LOC107597260,LOC107746241,LOC107672756,LOC107741198,LOC107663227,LOC107557115 coding downstream 4226 11865198 ~ 11871038 (+)
arhgef9a arhgef9a,arhgef9,LOC107741200,LOC107557118,LOC107597261 coding downstream 15993 11876965 ~ 11901271 (+)
tenm1 tenm1,LOC107713050,LOC107557119,LOC107597323,LOC107741271 coding downstream 176476 12037448 ~ 12164936 (+)
LOC122344656 cds2,LOC107654641,LOC107597267,LOC107741205,LOC107663217,LOC107557099 coding downstream 376762 12237734 ~ 12245428 (+)
G35629 NA non-coding upstream 76799 11773986 ~ 11775492 (+)
G35606 NA non-coding upstream 123690 11728276 ~ 11728601 (+)
G35585 NA non-coding upstream 144518 11707531 ~ 11707773 (+)
G35584 NA non-coding upstream 145293 11706659 ~ 11706998 (+)
G35350 NA non-coding upstream 321047 11530518 ~ 11531244 (+)
LOC122345698 NA non-coding downstream 82465 11943437 ~ 11986820 (+)
G35733 LOC107557098,LOC107663216,LOC107597264,LOC107672815 non-coding downstream 312311 12173283 ~ 12182024 (+)
LOC122345282 LOC107597264,LOC107672815 non-coding downstream 417158 12278130 ~ 12287378 (+)
LOC122345281 NA non-coding downstream 423473 12284445 ~ 12285122 (+)
G35756 LOC107557121,LOC107597264,LOC107672815,LOC107663216,LOC107557098 non-coding downstream 495466 12356438 ~ 12358798 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other upstream 199608 11638516 ~ 11652683 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other upstream 548860 11266642 ~ 11303431 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other upstream 702066 11136223 ~ 11150225 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other upstream 787845 11046479 ~ 11064446 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other upstream 918538 10926823 ~ 10933753 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other downstream 63256 11924228 ~ 11943110 (+)
G35720 LOC107654642,LOC107597266,LOC107743332,LOC107741203,LOC107557123,LOC107663229 other downstream 388166 12249138 ~ 12255672 (+)
si:ch211-225b11.4 si:ch211-225b11.4,LOC107743340,LOC107597327,LOC107654601,LOC107580265,LOC107735986 other downstream 653041 12514013 ~ 12528790 (+)
iscu si:ch211-191d15.2,iscu,LOC107597282,LOC104937683 other downstream 842380 12703352 ~ 12705245 (+)
LOC122346073 LOC107654625,LOC107597279,LOC107741224,LOC107696048,LOC107727161 other downstream 942817 12803789 ~ 12807351 (+)

Expression


Co-expression Network