LOC122345442


Basic Information

Item Value
gene id LOC122345442
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 3623142 ~ 3650703 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239570.1
CAGGTtgaggctgttttttttaatcgtcTTGTTACCACTGGAGACCAAGCGGCCAACCTTAGGCTGAGTTTGCACTGCAGCTTTTATATGCCTGAGTATATCTGAACCGCCGTTGAAAAGTCTGAGAGCAGTGGAAATGGCGGTTCAGAGCCATGTTTCAGATTCTGGATCCTGCAAAGCGGAAAAGGCGTATGAATGTGAGATGTTTTGGGAGAGATTTCGGCGCAGACAGGAACCGCTGACCCATAGAGTCTACGGTTCACTCAGACGTAGCTGTGCTGAGAATGCACTGGAGTCACTTCACCTGGAAGCAAAGAACCTCATCACCAATTATCTGGGACAAGCAGACAAGGCGCCGAACGAGAAGATCTCTGAAGCCGATGACGATCTCGTTCACGAAAGCCCTCCACATTCTTCACAGGAGAACGAGAAAGTGGTACCAAAGTGGTCGTGGAAGAGAGAGGACGCAGTTCTTCGGAAACTCTTACACCGCACAAGGCGGCACGTTCTTGCGGTGAAGCAGGGTCGCAGCTACTTTCACCTCCTTCAGGAGGAGGCGCAGGAGGAGCAGCGGAGGGAAAGACGGAGGAGAGAGGAAGTGAGACGCGGCAGGCTACGTCCTCCAGCTCTCTCCGATTCAGACGAGGACAGTGATGCCGAGAGATGGTGTGATGTTACGGCAACATCCTCTGCAGACCGGGAACCCAACAAGAGGAAAATACGGGCTCGTCCGTTTACCCCCATCCACAGATCGCTGATCTCAACACCTCCTCATCTGCTACCAGGGGAGCGTGTGTATCGTCAGCTGTGCTGTCTGAACTGGCTGCTGGAGGCGCTGACTCTCGAACGCTCTGGAAGAGTTGGACCTGTAACGTCTTGTTGGGATGCCAGGGACCCTGGAACGAGCAGCACCACGATAAAGAGACTGAATAAGGAAAAGGCAATAGAGGCCAAGTGGGAGCAGTTTATCGCCCCGCCGAAGATGCGGCAGCTCACATCCAGAGCATCAGGAGTTTCTTCAGGGAGACATCCGCTCCGGAAGACCTCCTCCTCGGCATCGGGGTCATCAGCGGGCAGCTTGTCGTCTCGGGCTCCGGCTCCGGATCACACCTGTGATGAGTCTGCTTACACCAAGGGCATGGAGACCGACTCTGGTCCTCCTTCGTGCGAATATCTCGAGAAGTTCCTTCAAGAAGTGTGTCTTAAAAACTGTGATAAACGACTCGCATCCAGCGCCTCTGCCCCAATCATCCGCAAGGAGGAAGTGATGTCGGGAGGGAAGAAGCCGTCTGTCGTGGCCAAAGCAGAAAAGTTAACACTCAGTTTATCTGATGCTCTGGACCTCTGTGCCAAGAAGAGATGGGATTTTGGGGTCCAGGGGTACTCAGAGATGCTGTCCTGCGGACGAATTCGTTCTGCTGTGACCTCAAAAACCTCTTTGGTCTCTCCGAGAGCTCCAGACTCAAACATCCCTGAGGAGCCATGCAGCActcagtggCTCTCAGCGTTGCTCAGTAATCTGTCCTCCATCAAACACTCGGACAGGAGGGTCGCTCGTCTGCTGGAGAAGCTGAGCCGGTTTACAGCAGGCCGCTGTCTGCAGCTTCACACACAACACTTCCTGCGGATCTTGGGCTCGCTGCAGGCCTGGGAGCTCTGCTGTCCTGATCTGTGTGTGGCTATAGAGATAGTGAGGCTGAATGTGGTGAAGATGCCCAAAGCGGAGTACGACTCGTGGTTAAAGAGCCGAGTGAAGCCATCACAGGCCCTCAAGAGTGCTGCACATAACCCGTAATCAGCAACtccaaaatcaatatatataagaatataagattacaatatagaaatgtaatgtatgtaaacTATAgtatgatatattaaaatataagcaattgaaaaaaaagtgtattttttgcatggacattatttttttattgttcagttCATTAGCATTTTACCAAGCGTCCTTTTAAATACTTGTGATAGTGTtcacaataatttaatttgctgataattgcatgtatttattgattaattctGTGTCGTAATTCAATCAaatctttatttgatttatttctcattagtgcaatttacagttttggcattGCACTGAAGAGAATCTACAGTGAAattgtcatgaaagtagtttCGCTCGATGGTATGAATGTCCTCATCATTgtgcaattctttttttttcttttgatttgagGTGAAATATGATGTTCTTCACAGGAtgtgaatttataaataat
>XM_043239571.1
AACCCAGAGCAGTGGAAATGGCGGTTCAGAGCCATGTTTCAGATTCTGGATCCTGCAAAGCGGAAAAGGCGTATGAATGTGAGATGTTTTGGGAGAGATTTCGGCGCAGACAGGAACCGCTGACCCATAGAGTCTACGGTTCACTCAGACGTAGCTGTGCTGAGAATGCACTGGAGTCACTTCACCTGGAAGCAAAGAACCTCATCACCAATTATCTGGGACAAGCAGACAAGGCGCCGAACGAGAAGATCTCTGAAGCCGATGACGATCTCGTTCACGAAAGCCCTCCACATTCTTCACAGGAGAACGAGAAAGTGGTACCAAAGTGGTCGTGGAAGAGAGAGGACGCAGTTCTTCGGAAACTCTTACACCGCACAAGGCGGCACGTTCTTGCGGTGAAGCAGGGTCGCAGCTACTTTCACCTCCTTCAGGAGGAGGCGCAGGAGGAGCAGCGGAGGGAAAGACGGAGGAGAGAGGAAGTGAGACGCGGCAGGCTACGTCCTCCAGCTCTCTCCGATTCAGACGAGGACAGTGATGCCGAGAGATGGTGTGATGTTACGGCAACATCCTCTGCAGACCGGGAACCCAACAAGAGGAAAATACGGGCTCGTCCGTTTACCCCCATCCACAGATCGCTGATCTCAACACCTCCTCATCTGCTACCAGGGGAGCGTGTGTATCGTCAGCTGTGCTGTCTGAACTGGCTGCTGGAGGCGCTGACTCTCGAACGCTCTGGAAGAGTTGGACCTGTAACGTCTTGTTGGGATGCCAGGGACCCTGGAACGAGCAGCACCACGATAAAGAGACTGAATAAGGAAAAGGCAATAGAGGCCAAGTGGGAGCAGTTTATCGCCCCGCCGAAGATGCGGCAGCTCACATCCAGAGCATCAGGAGTTTCTTCAGGGAGACATCCGCTCCGGAAGACCTCCTCCTCGGCATCGGGGTCATCAGCGGGCAGCTTGTCGTCTCGGGCTCCGGCTCCGGATCACACCTGTGATGAGTCTGCTTACACCAAGGGCATGGAGACCGACTCTGGTCCTCCTTCGTGCGAATATCTCGAGAAGTTCCTTCAAGAAGTGTGTCTTAAAAACTGTGATAAACGACTCGCATCCAGCGCCTCTGCCCCAATCATCCGCAAGGAGGAAGTGATGTCGGGAGGGAAGAAGCCGTCTGTCGTGGCCAAAGCAGAAAAGTTAACACTCAGTTTATCTGATGCTCTGGACCTCTGTGCCAAGAAGAGATGGGATTTTGGGGTCCAGGGGTACTCAGAGATGCTGTCCTGCGGACGAATTCGTTCTGCTGTGACCTCAAAAACCTCTTTGGTCTCTCCGAGAGCTCCAGACTCAAACATCCCTGAGGAGCCATGCAGCActcagtgGAGGGTCGCTCGTCTGCTGGAGAAGCTGAGCCGGTTTACAGCAGGCCGCTGTCTGCAGCTTCACACACAACACTTCCTGCGGATCTTGGGCTCGCTGCAGGCCTGGGAGCTCTGCTGTCCTGATCTGTGTGTGGCTATAGAGATAGTGAGGCTGAATGTGGTGAAGATGCCCAAAGCGGAGTACGACTCGTGGTTAAAGAGCCGAGTGAAGCCATCACAGGCCCTCAAGAGTGCTGCACATAACCCGTAATCAGCAACtccaaaatcaatatatataagaatataagattacaatatagaaatgtaatgtatgtaaacTATAgtatgatatattaaaatataagcaattgaaaaaaaagtgtattttttgcatggacattatttttttattgttcagttCATTAGCATTTTACCAAGCGTCCTTTTAAATACTTGTGATAGTGTtcacaataatttaatttgctgataattgcatgtatttattgattaattctGTGTCGTAATTCAATCAaatctttatttgatttatttctcattagtgcaatttacagttttggcattGCACTGAAGAGAATCTACAGTGAAattgtcatgaaagtagtttCGCTCGATGGTATGAATGTCCTCATCATTgtgcaattctttttttttcttttgatttgagGTGAAATATGATGTTCTTCACAGGAtgtgaatttataaataattgcatgca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239570.1 True 2252 mRNA 0.48 14 3623142 3650695
XM_043239571.1 False 2093 mRNA 0.48 13 3623623 3650703

Neighbor

gene id symbol gene type direction distance location
hspb8 hspb8,LOC107720866 coding upstream 4087 3610472 ~ 3619055 (+)
suds3 suds3,LOC107569732,LOC107708245 coding upstream 117939 3497249 ~ 3505203 (+)
pebp1 pebp1 coding upstream 200998 3417904 ~ 3422144 (+)
hk2 hk2,LOC107668748,LOC107755855,LOC106585103,LOC108255852,LOC108411364,LOC107708252,LOC107599625 coding upstream 810722 2759355 ~ 2812420 (+)
LOC122345789 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 coding upstream 897718 2717013 ~ 2725424 (+)
znrf3 znrf3,LOC107707852,LOC107656810,LOC107560969,LOC107755873,LOC107702225 coding downstream 26885 3677588 ~ 3747908 (+)
LOC122345408 htr7c,LOC107707833,LOC107656814,LOC107561270,LOC107560967,LOC102292089 coding downstream 253275 3903978 ~ 3940975 (+)
LOC122344976 htr7c,LOC107707833,LOC107656814,LOC107561270,LOC107560967,LOC102292089 coding downstream 725100 4375803 ~ 4409270 (+)
chfr chfr,LOC107656818,LOC107548943,LOC107600128,LOC107672629 coding downstream 1262626 4913329 ~ 4928533 (+)
ascc2 ascc2,LOC107707848,LOC107741258,LOC107600125,LOC107548944 coding downstream 1351305 5002008 ~ 5008609 (+)
G32992 NA non-coding upstream 116432 3505648 ~ 3506710 (+)
G32956 NA non-coding upstream 233655 3388301 ~ 3389487 (+)
G32955 NA non-coding upstream 235414 3387494 ~ 3387728 (+)
G32934 NA non-coding upstream 329584 3293274 ~ 3293558 (+)
LOC122345883 NA non-coding upstream 436620 3180809 ~ 3186522 (+)
LOC122346010 NA non-coding downstream 706 3651409 ~ 3652844 (+)
G33018 xbp1 non-coding downstream 9164 3659867 ~ 3662929 (+)
LOC122345412 NA non-coding downstream 605475 4256178 ~ 4282937 (+)
G33077 NA non-coding downstream 677495 4328198 ~ 4329596 (+)
G33079 NA non-coding downstream 685669 4336372 ~ 4337998 (+)
tbx1 tbx1,LOC107755862,LOC107699917,LOC107708247 other upstream 280072 3328800 ~ 3343070 (+)
LOC122345783 npffr1l2,LOC107755826,LOC107599640,LOC107668729,LOC107708240,LOC107654224 other upstream 973781 2627084 ~ 2649361 (+)
G32706 LOC107560224,LOC107681222,LOC107709689,LOC107690695,LOC107757958,LOC107587469 other upstream 1354948 2265145 ~ 2268194 (+)
LOC122345711 LOC107556260,LOC107714787,LOC107691117,LOC107551460,LOC107715220,LOC107690391,LOC565819 other upstream 1603992 2010217 ~ 2019150 (+)
LOC122346050 nutf2,LOC107726276,LOC107692933,LOC107733565 other upstream 1717643 1900627 ~ 1905499 (+)
G33174 NA other downstream 971804 4622507 ~ 4623060 (+)
fbrsl1 LOC107656817,LOC107600129 other downstream 993398 4644101 ~ 4902403 (+)
G33355 kctd10,LOC107595924,LOC106564472,LOC107672630,LOC107597295,LOC107752136 other downstream 1953630 5604333 ~ 5649885 (+)
myo1ha myo1ha,myo1h,LOC106585663 other downstream 1974564 5625267 ~ 5648047 (+)
tnpo1 tnpo1,LOC107700926,LOC107655929,LOC107596175 other downstream 2309129 5959832 ~ 5982816 (+)

Expression


Co-expression Network