sh2b3 (sh2b3,LOC107594562,LOC107550292,LOC107704923)


Basic Information

Item Value
gene id sh2b3
gene name sh2b3,LOC107594562,LOC107550292,LOC107704923
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 513432 ~ 549044 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239576.1
ATTTGTCGTCGCTTGTTGTCGCTGAGTCCATggaaagtttgtgtgtgttttttttccttcctgaAAGTTTACGCAGGGCTGTTGTTGCGCGCATCCAACATGACAGAGAAAGTAACGGACATCACGGCTGGCAGTGATTCCCTGCTGTGCAATGAATGGTAACACTGTCCAGCAGACCACGAGCACTGCACCGTCCATAGCACCTCCTTGTGGATGGAGGGAGTTCTGCGAGTTGCATGCCAGCACCACGGCCCGAGAACTTGCCCAGCACTACCGGCGCTTCGCCAGAGAGCGGCCGGTGCAGGATGTGGTCCCACCAGAAAGTTTCTCAAAGCAGTTCAGCGCCCTCTTCCAGCATCACTTCAGCTGCGAGGTGGCTAAAGATGCAGAACCCTCCCTGTGGCCACCACTGCCTCCTCCCTTGCTGCCCATGACTGGCCGCTTACGCATCACTTCCTTCTCAGGAGTGCTGGATTACCGGGAGACCGCACGGCCAGGAGGGACTCCGCGAGTTGCCGTGTTGGCGCCCAAACCTGATGCCGCCGGTGTCCCTAGAGAACAGGAGCAGTTGCTGCGATGCTCTGCTGCAGACACTACACGCAGAACGAGGCATCATAGCCAGGAAGACGAACACTTGGAGAGGAGGACTGGGTCTGAACGATACTCACCCCCTTTGTTTTCCTTCTCTTCCCGTAGTGACGTAACCAACTTTTCTGTCAGGGGATTTAGAGAAAGCGTATGCCGGTTCTTTAAGAAATCCCCCCAAACCGATGAACCTTCAGGTGGTTGCCCAAGGGACGATTCGATCAAAGGGGGGCCCTCGGCAACCATTGAATGCACCTCTCAAACACCGACCCAGACTGTGCAGGTACCCGCCCATCGCGTCTCAcagaagggtgcgcgatgggaACGATGGAATCTGTTGAAAACTGTGAGACGGAGGCAAGACACAGGAAGTGTTTGTAAAGAGGGGCAACTGCTGTACCTGGAGGTGGATGACACTATCTCAGACACTCCCCCACAATGGCTGCGCTGCCGCCTGCAGGTCAGGAGGACCAACGAGCACACCGCTAGTGAGAGGTACCAGCTGGAGCTCTATGACCTACGCAAGGACAACAAAACGCCAAAGCTCACCGTACCCTGTTCGGACATCCAAGAGATTCGACGCTGTAATCGCCTAGAGATGCCAGACAACATGAACACATTTGTCTTAAAGgttACTGGTCATTCGGGTAGTTTTATATTTGAGGCTGATAATGAGCAGCAGGTGAGCTCTTGGACCACCGAGCTCAGAGAATGCATCACAAGCAGGTCAGATAGTGTGGATGGAGAAGCGTTTCCTGTTAGTGACTCGCTCAACGCAGCTCGCAGAGGGAGCACGGAGCCCAGCAGCCAGGgCTCTCTAGGTTTTGGACTAACAGAGCATGCCTACAATAAAACGGATCACTTCCTGTCCTCTTACCCATGGTTCCATGGGCCCATATCACGTGTGCGGGCTGCCTACCTTGTACAGCATGCTGGGCTCAGCGGCCATGGGAACTTCCTCGTGAGACAGAGCGAGACGCGGAGGGGAGACTACGTCCTCACGTTTAACTACCAGGGCAGAGCAAAGCATTTGCGTCTATCTTTAACTGAATGGGGTCAGTGTCGTGTGCAGCACCTGCGTTTCCCATCAGTCATGGACATGCTGAGTCACTTCCGCAACTGTCCGATCCCGCTGGAGTGCGGCGCCGCATGCGAAGTTATGCTGGCCAATTACGTGCGGGTAAACCCCACTCACACAGGTCAGAGTTCGGCCGTCGGCTCTCCGGTATTGGTGCCCTTCTCTCGCTGGAGCTCAGAGCCGAGTCTGGCTCACTGCAGTCCGGATTCGTGTCCTCACTCCAGCCCCTTCACGGCCCAGTCGTCCGGATTATCCGTGCTCCCGCATCGCACGGGCGCTTCGTTTCCAGACCGCCCCGTTCCCGTCCCCCTGCGCCGGAGCGAGTCGGTGGGCCGCAGAAACCTGCTCCGCCACCCCAACCCGCTGCCGCCCCTACTGGCCAACCGGGACTCTGACTACGAACTGGAGCCGCCCGACAGGGGGCGCAAGAGAGCCATCGACAACCAGTACATGTTCTTCTGACAGAGACAGAGGAGGAAAAAGAAGAGAACAAGCCGCGGATGAAAAGTGCTCCGGAATTCCCGGTCGGATGGAGAGCGTCTGGCAACCAAACGGAAGAAAGGAGTTGGAGTCGTGCAAGATTGCGCACGAGACTCGGGGCAGAGGCACCTGTGCGCTAACAATACCGCCGTACACCGGACACCCAGCCCTGGCAGCTGTCTACCTTGTGAATGTATTATACGGATGTTTCGCTATCAAATCAGAGTGTATCGTAAAATAGCTCGGAGGAGTTGTTGGATGGGAACGTTGCGAGACGGCTGGTCAGCAAGCCGAACACAAACCAAGGGTCCATTCACATTCAAACACTTTCGTGTCTACACTGGAAGCGGACATCGCAACAGCTCGAGGCCGTCTACACTGGATACATTCATTCAGCTGTATGCTAGAGGCTAGACTTTAGTAATCGACGATTACTAAAACGACGATAACATTTGTTTGTcgatcagacaaaaaaaatcgtTATATTCGacagaaatgcattacaaaatagATTTTGCATGCGATTTTAGTTTGATCTACATCTACAACTGCATATGCTTATAgtagaaatgacaaaatgattCAAGTTAGCTCATCAGACCAGGAGGCTAGAATTTAGCGATTATTAAAATCGTGTCAAAATCATTcgaaataatctttattttccACAGCAATcctttataaaattaatttagcatgCGATTAACTTTAGCATTAATTTTGCATATGTTCATATCCCTACAACTGCATATGCGTATTGTTAAGggaaaaaataagtcaaattaGTTCGCCAGACCAGGAGGCGAAAACGTGATGGATTGGGAAAAATCATCAGAATTTGCAATTTCAAAATTGATTTTGCATGtgatcattttataattatgttttattattagtactCCTACGACTGCATACGCATATGGTtagaaaccaaaaatgtttaaagtggaAGGCTAAGCTTCAGCAGTTAAGAAACATTACAATGTAATCAGtcgaaaaaaagttatttttccatgtgaatacttttataattgattttaattatgtCGGTGTTCCTACAACTGCGTATGCATATGGATAAAAATCGAAAAATGATTAACCAGTCAGACCAGAACACCTCGAGCTGGCTTTGATATAACGGTCAGAAGTTATTTAAACCTGTAAAGTATGCAAtttataagaaaacaaaaatattttaataaaaccgCCTTATTTTAGATGTGTCTGAAGTCAGAAATGGAGAAATGGGGGCCGTCCACGTCAGGCGCCCACGATGTAGACAGCTCCGGTGTGATTTAGGTGTCTGGTGTAAATACGGTGGTAAACATCTAATAGTTTTTAGTCTGgctgaatacacacacacacacactttcagattgtttatttcatcttcACTTGTAGTAATACACAGGTTTCTTGATGTTtgcgtattaaaaaaaacaaataatataaatcgTAGAACCACGGATTTATGTTGACGCGAGTCTTGAGGTTTATCTGACCAAAGAGTAAAATTAACCAAACCAGATTAGCCAAACACATTTTGTTATGCctgtttatcatattttataatgaattgtTTTACCCTGTGAATTCATTCTTTCTATctgttttaacacattttagCCTGTGTTTCACGGCTTCATTAGCTGTGTTTCACTACTTTTAAACTAACCGCTACCAAATATCACACCATAAATAGTTGATTTGAAGCTATTTGTCCATTGTTTTCAGTAAGtgtattacaaaaacaaaacaaaaaaaaaacattgcttgaTGTTTTCGGAGCTTGTTCtcctttttgtctctttttgagTCATTGTGAATGTCTATGTTTGTGGCTTAACACTACCACAATAATCTAATCTGTATCAAGCACAGATACCCAACTTTATATCTTATTCATAGATAATTTGGCAAATCTCACATTTCACCCTTAAGTCATTACAATAATttgtcatttgaataatttggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcgcgcgcgcacTTGATAAATctgatcaaagaaggctgtgaaaatgaatattaatccttttgatctttcatttaaaagaaaaacacatctaACCATTCATTGGATAATAAGAACTTAAATTGTGGGGAAATATCCTTATGAAAAATAGTGAATATGAATGGGAATACACTTCAGAAAGGAAATTTCTAGTGCAACAACTGTTATTATCCAatgaaagattacatttttgtgaattaaaaaaaaaagatcaaaaggattagGTGCTAATAATAGTGAGTGCCACTgtctgtatacacacacacacacatatatatatatatatatatatatacatacatacatacatacacacacacacatacagatatacacacacttcatttcatttaggaccataaatatatatgtatttctaatatttcactattcattgttatttccgtgttttactgtaatacagtaattttatacaatgtattttttaaatttgctgtAATGCagtacttttatataaaaatcagcATACAATCAGTACAGCAGAACAATttgacttcacacacacacacacacaaacatacatatatttatatattattatatttttaattatggttGGAGAGAATTACTGGGGGGattataatgctaaataaataaggtCCTAAAATGGACTTCATtcaatataataacatttttttcttctggttaTAGGGTGACAAGTTTTGTGAGTTTTAATTAATGATCAAAAGCAAGAAAGCTTCCTATACTTTCTCCTCTTCTGCTTCACTGCAGAATCTGGCCTGTGTTAGAGTATATACTGTTCTTGCTTTTCTGATTTTTATCAGCCGTTCGAAACTCTacaaatatctatatttttttaacatgataTGAAAGTGTGAACTGTACCTGTGTGTCACTACCTCGCATTGCATTGTGGACTGCGTGTTCCAGGTggagtgttgttttttttgaaaatgattttacgGTGTGAGAGCAGCATCGAGCGGATGGAGTCAGACCATTCGACTTCTCAATGACCTGTCGTTGAGCGCACGTCCACTAATAAGTGATGTGCTCAGTTCGATCAGCAAAGTATTGTTTAAATGACTACGCTGCTTTGCAAATGaccctgaatgttttttttgttttttttttgtagttattaAACACTCGTTTTATGCAAA

Function

symbol description
sh2b3 Predicted to enable transmembrane receptor protein tyrosine kinase adaptor activity. Predicted to be involved in intracellular signal transduction. Predicted to act upstream of or within hemopoiesis and signal transduction. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in essential thrombocythemia; familial erythrocytosis 1; and myelofibrosis. Orthologous to human SH2B3 (SH2B adaptor protein 3).

NR:

description
PREDICTED: SH2B adapter protein 3-like

GO: NA

KEGG:

id description
K12459 SH2B1_3; SH2B adaptor protein 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239576.1 True 5335 mRNA 0.44 8 513432 549044

Neighbor

gene id symbol gene type direction distance location
gak gak,LOC107704343,LOC107667379 coding downstream 1553 487044 ~ 511879 (-)
lrp13 LOC107725159,LOC107594583,LOC107704910 coding downstream 102339 399992 ~ 411093 (-)
si:ch211-12e13.10 NA coding downstream 113749 398419 ~ 399683 (-)
LOC122345880 NA coding downstream 140614 371671 ~ 372818 (-)
adamts12 LOC107725168,LOC107704241,LOC107594580,LOC107750303,LOC107658289,LOC107567650 coding downstream 173701 316841 ~ 339731 (-)
pheta1 LOC107653115,LOC107725116,LOC107594559,LOC107550295,LOC107723306,LOC107687307 coding upstream 757 549801 ~ 555622 (-)
ier3 LOC107723299,LOC107667686,LOC107653130,LOC107567455,LOC107751423,LOC107550277 coding upstream 44459 593503 ~ 594649 (-)
tor4ab LOC107653139,LOC107751425,LOC107723309,LOC107550278,LOC107567459,LOC107667676 coding upstream 57326 606370 ~ 613827 (-)
LOC122346115 LOC107751416,LOC107579531,LOC107653145,LOC107550279,LOC107667655,LOC107723311 coding upstream 67736 616780 ~ 622514 (-)
chek2 chek2,LOC107653214,LOC107667648,LOC107567453,LOC107550275 coding upstream 101029 650073 ~ 658193 (-)
G32201 NA non-coding downstream 27662 484962 ~ 485770 (-)
G32193 LOC107594561,LOC107725071,LOC107725113,LOC107704326,LOC107723313,LOC107667397 non-coding downstream 30023 477761 ~ 483409 (-)
G32187 ugt2b3,ugt2b1,LOC107667397,LOC107725113,LOC107667542,LOC107723313 non-coding downstream 33551 458480 ~ 479881 (-)
G32230 NA non-coding upstream 142374 691418 ~ 691700 (-)
G32239 NA non-coding upstream 155190 704234 ~ 704604 (-)
G32245 NA non-coding upstream 169093 718137 ~ 718410 (-)
LOC122344906 LOC107676118 non-coding upstream 271146 820190 ~ 822829 (-)
G32275 NA non-coding upstream 328866 877910 ~ 879142 (-)
kcnv2b atp5ib,atp5i,atp5ia,kcnv2b,LOC107703581,LOC107725101,LOC107704252,LOC107594594,LOC107723293 other downstream 125554 382052 ~ 387878 (-)
rictora rictora,LOC107704198,LOC107658248,LOC107567655,LOC107750288,LOC107594576,LOC107725140 other downstream 251761 239951 ~ 261671 (-)
G32104 LOC107725162,LOC107594575 other downstream 477084 35777 ~ 36348 (-)
G32103 LOC107725162,LOC107704185,LOC107594575 other downstream 478715 33779 ~ 34717 (-)
G32101 LOC107594575,LOC107725162,LOC107704185 other downstream 489483 20139 ~ 23949 (-)
ddr2l ddr2l,LOC107704361,LOC107725118,LOC107550294,LOC107723312,LOC107667359,LOC108444179 other upstream 7610 556654 ~ 583095 (-)
wdr31 wdr31,si:ch73-266o15.4,LOC107653158,LOC107667323,LOC107751417 other upstream 73470 622514 ~ 631126 (-)
castor1 gatsl3,LOC107755828,LOC107726730,LOC107704487 other upstream 763560 1312604 ~ 1336187 (-)
lrrc74b lrrc74b,LOC107755819,LOC107667596,LOC107599620 other upstream 793562 1342606 ~ 1354414 (-)
ypel1 ypel1,YPEL1,ypelc,ypel2b,LOC103374080,LOC106586007 other upstream 1123980 1673024 ~ 1694286 (-)

Expression


Co-expression Network