LOC122345447 (aldh2.2,aldh2.1,aldh2,LOC107662045,LOC106578507)


Basic Information

Item Value
gene id LOC122345447
gene name aldh2.2,aldh2.1,aldh2,LOC107662045,LOC106578507
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 27457790 ~ 27467414 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239578.1
TGCTCTGAAGTCCGAGTTCATCAACAATCTCCGTGTTGAAGGCTACTGACTAAACATGCTGCGCACTGTTTTCTCCAGAACTTTTCCACAAGTTTTCCGTATTTCAACATGTCAGCATTCAACGATTCCTGCACCGAACGTTCACCCAGACGTTCACTATAACAAGATTTTTATCAACAATGAATGGCATGATGCGGTGAACAAGAAAACCTTTCCAACCATCAATCCTTCGACCGGTGAGGTGATCTGCCACGTCGCAGAGGGAGAAAAGgCAGATGTGGAAAAAGCTGTCAAAGCTGCCAAAGATGCTTTCAAGTTTGGGTCTCCCTGGCGGCGCATGGACGCGTCCCACCGCGGGCTGCTCTTGAGCCGATTAGCAGACTGCATAGAGAGAGACGCTGCCTATTTAGCCgaaCTAGAGACTCTCGACAATGGAAAACCTTACGCAGTCTCCTACACCGTGGACGTGCCCATGGTGGTCAAATGCTTGAGGTATTATGCTGGCTGGGCAGACAAATGGGAGGGCAAGACAATTCCCATTGATGGTGACTACTTCTGCTACACCAGGCATGAGCCCATTGGAGTCTGTGGCCAAATTATCCCTTGGAACTTCCCGCTGCTGATGCAGGCCTGGAAGCTCGGTCCTGCTCTGGCCACAGGAAACACAGTGGTGATGAAGGTTGCAGAGCAGACTCCTCTCACAGCGCTCTATGTGGCCAGTCTGATCAAAGAGGTGGGTTTCCCTGCTGGCGTCGTCAACATCGTCCCAGGATTGGGTCCCACAGCTGGGGCAGCCATCGCATCTCACATGGATGTGGACAAAGTAGCTTTCACTGGCTCCACTGAGGTAGGTCACCTCATCATGAAAGCCTCAAGTACCAGTAATCTGAAGAAGGTCACACTAGAGCTGGGAGGAAAGAGTCCAAACATCATTCTATCAGATGCCAATATGGAGGAGGCAGTGGAGCAGTCCCATTTCGCCCTGTTCTTCAACCAAGGCCAGTGCTGTTGCGCAGGCTCTCGTACGTATGTACAGGAGAGCATCTACGATGAGTTCATTGAGCGAAGTGTAGAGAGAGCTAAGAAGAGGATTGTGGGAGATCCCTTTAACTTCAACACAGAGCAGGGGCCCCAGGTGGATGAGGAGCAGTTCCAGAAGATTCTTGGCTACATCAGCAGTGGGAAGCGTGAGGGCGCTAAGCTCATGTGCGGCGGCGGACCAGCAGCTGACCGCGGCTACTTCATTCAGCCTACTATCTTTGGCGACGTCAAAGATGACATGACAATTGCTCGAGAGGAGATCTTTGGACCCGTGATGCAAATTCTGAAGTTTAAATCTTTAGAGGAAGTGATCGAGAGAGCCAATGACAGCAAATACGGCCTTGCAGCTGCTGTATTTACCAAAAACATTGATAAGGCCCATTACATATCCAACGGTCTGCGCGCCGGCACAGTGTGGATTAACTGTTATGACGTGTTCGGAGTTCAGGCTCCATTTGGAGGATACAAGGCTTCAGGAATTGGTCGTGAGTTAGGGGAGTACGGACTGGACAACTACACAGAGGTCAAAACGGTTACAATTAAGGTCCCTCAGAAAAATTCGTAAATGGATGCATTCGCTTAAGGAAGCTGTTTCCGAATTATAAGAGCCATGCCAGCCGTTACTAAAATGTACTATGATTACTTTAATTCTCGTGCATTAATGTGTTCGTTTCTACTGAAAAGAAATACGCGTTTgttctgtcaaataaataaagctctAGCTGTGATGATTAGTTAACCACATGCTGAactgttaattttaaaaagatgtttgaTTATGCACCAGACAAAAGGAGGGACAATGTGTATTGGGCTGACTTCATTCTGTTTAATTTGAGCATTATATAGAGCACATAATAACTAcaattatttacatgcatatgctgatttgtgaaataaatgcttcagttttggtttta

Function

symbol description
aldh2.1 Enables 3-chloroallyl aldehyde dehydrogenase activity. Predicted to act upstream of or within cellular aldehyde metabolic process. Is expressed in several structures, including fin; heart; liver; musculature system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including alcohol use disorder; artery disease (multiple); diabetes mellitus (multiple); diabetic neuropathy; and liver disease (multiple). Orthologous to human ALDH2 (aldehyde dehydrogenase 2 family member).
aldh2.2 Predicted to enable aldehyde dehydrogenase (NAD+) activity. Acts upstream of or within regulation of cellular response to drug. Is expressed in several structures, including digestive system; fin; immature eye; nervous system; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in several diseases, including alcohol use disorder; artery disease (multiple); diabetes mellitus (multiple); diabetic neuropathy; and liver disease (multiple). Orthologous to human ALDH2 (aldehyde dehydrogenase 2 family member).
aldh2 Enables aldehyde dehydrogenase (NAD+) activity. Predicted to be involved in alcohol metabolic process and carbohydrate metabolic process. Located in extracellular exosome. Implicated in several diseases, including alcohol use disorder; artery disease (multiple); diabetes mellitus (multiple); diabetic neuropathy; and liver disease (multiple). Biomarker of hepatocellular carcinoma.

NR:

description
PREDICTED: aldehyde dehydrogenase, mitochondrial-like

GO:

id name namespace
GO:0006081 cellular aldehyde metabolic process biological_process
GO:2001038 regulation of cellular response to drug biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0004028 3-chloroallyl aldehyde dehydrogenase activity molecular_function

KEGG:

id description
K00128 ALDH; aldehyde dehydrogenase (NAD+)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239578.1 True 1961 mRNA 0.47 13 27457790 27467414

Neighbor

gene id symbol gene type direction distance location
mapkapk5 mapkapk5,LOC107702970,LOC107662046,LOC107548527,LOC107556043 coding downstream 687 27445539 ~ 27457103 (-)
kiss1rb kiss1rb,LOC107728362,LOC107702921 coding downstream 12320 27439081 ~ 27445470 (-)
zgc:153044 NA coding downstream 21340 27434577 ~ 27436450 (-)
tmem116 si:ch211-157p22.10,LOC107740032,LOC107548513,LOC107556047,LOC107728188,LOC107662092,LOC107702969 coding downstream 26174 27421756 ~ 27431616 (-)
psat1 psat1,LOC107548526,LOC107556046 coding downstream 36786 27415308 ~ 27421004 (-)
eif2b1 eif2b1,LOC107675950,LOC107728130,LOC107702972 coding upstream 43459 27510873 ~ 27514550 (-)
dguok LOC107675955,LOC107740006 coding upstream 51351 27518765 ~ 27522039 (-)
mob1a LOC107739988,LOC107675956,LOC107702973,LOC101160416,LOC103363194,LOC107087288,LOC103031464,LOC101481896 coding upstream 54651 27522065 ~ 27525414 (-)
rilpl2 rilpl2,LOC107728107,LOC107702927 coding upstream 75006 27542420 ~ 27545250 (-)
ythdc1 ythdc1,LOC107693408,LOC107702977,LOC107728241 coding upstream 108324 27575738 ~ 27589910 (-)
G39893 NA non-coding downstream 171596 27285182 ~ 27286194 (-)
G39888 NA non-coding downstream 190561 27265289 ~ 27267229 (-)
G39872 NA non-coding downstream 223628 27232658 ~ 27234162 (-)
G39870 NA non-coding downstream 232228 27224887 ~ 27225562 (-)
G39857 NA non-coding downstream 268568 27188850 ~ 27189222 (-)
G39935 NA non-coding upstream 71074 27538488 ~ 27538861 (-)
G39936 NA non-coding upstream 71526 27538940 ~ 27539327 (-)
G39951 rgs3a,LOC107702900,LOC107728018,LOC107556028,LOC107558862,LOC107693410 non-coding upstream 183036 27650450 ~ 27650827 (-)
G39964 NA non-coding upstream 281046 27748460 ~ 27789829 (-)
G40021 NA non-coding upstream 428229 27895643 ~ 27895961 (-)
isca1 isca1,LOC107702919,LOC107662049 other downstream 59049 27382921 ~ 27398741 (-)
LOC122345426 smpx,LOC107705278,LOC107671350,LOC107590224,LOC107663668,LOC107586736,LOC107721880 other downstream 350405 27099815 ~ 27107385 (-)
LOC122344921 NA other downstream 1889104 25561974 ~ 25568686 (-)
G39413 LOC102215562 other downstream 2175504 25281886 ~ 25282286 (-)
LOC122345923 NA other downstream 2699122 24754202 ~ 24758668 (-)
LOC122344874 NA other upstream 418627 27886041 ~ 27895454 (-)
G40080 pappaa,pappa,LOC107556005,LOC107558864,LOC107739977,LOC107675511,LOC107728218 other upstream 788414 28255828 ~ 28264704 (-)
LOC122345120 LOC107728794,LOC107696375,LOC107590009,LOC107739482 other upstream 1856568 29323982 ~ 29326115 (-)
G40182 brinp1,LOC107715673,LOC107674904 other upstream 1993171 29460585 ~ 29490204 (-)
eng LOC107562335,LOC107704777,LOC107741503 other upstream 2147305 29614719 ~ 29655061 (-)

Expression


Co-expression Network