arhgap25 (LOC107741203,LOC107557123,LOC107663229,LOC107654642,LOC107743332,LOC107597266)


Basic Information

Item Value
gene id arhgap25
gene name LOC107741203,LOC107557123,LOC107663229,LOC107654642,LOC107743332,LOC107597266
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 12381364 ~ 12394042 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239594.1
aacacaccaTGGTTAGTTTTACATTCACAAATACGAAGAAACCATGGCGCGTGTCTTCAAGAAAATGACCATTTCTGAGAAGGAGTTGTCCCTATTGGTTAATGTGCATCCTGCACCATTGTAGACTGCATTTTTGCCTGTGTAGAAATTCATCAcctctgttatttttttctgtgtcttGACTTTGCCACTCACTTCCTCAGCTCATGAAGATTGCGGGTACGAGGAGTCACGGTGCTGCTCTGCTGCCTATGACAAACATGCTGGATGTAGAAACTTCATAGTAACTTTTGGTTTgctcacacaaacactgcagGCGAGCCGAAGGGCAAGATCGAACGTGTTtggaagtgtaaaaaaaaagaagaagaatcaGATCAGCAGAGGAAGGAGGAAGTAAAGAGAAGAAGAGGGGCTGACTGGAAAGAATGTACACTTAGAGTtgactgtgtgttttgtgattgtttttgtgtgtgcgtgtgagcgagagagagaatgtgtggtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaccttTTGGTCCGATTTTGAAGAAATGTCTCTGAGACTACCTCATAACTGGGACTTCAGCACTTTCAGAGCTGAAACAGCTAAGATAGCTCGCTCCAAGAGTGTTATGCCAGGGAAGAGCCCTGGATCCACTCACACCGGTTTTAAGAGATCCATGGAGAAACCTCTGAAAACAGGCTGGCTGAAGAAGCAGAGATCCATCGTAAAGAACTGGCAGCTGCGCTTCTTTGTGCTGAGAGGCAACGTCTTAACATACCACAAAGATGACAGAGAAAATGCTGTCCAAGGAACCATCCCTTTATTCTCATGCCAAGTTAACGAGCTGCCATCTAATGCGGATGATAAATTTCTGTTTGAGATTATCCCAGGTAGCAGTACAGACCGGGAGCGGGAAGCCTATGTTCTCATGGCAACCAGTCAGAGCGAGATGGAAGAGTGGGTGCGCTCCATTCGCAAAGCCATCGGATCACGGTCCAATGGAGTATTTGGAAAGAGCCTTTCGGATATGATGGTGTATGAGAAGAAATTTGGACCACGTCTGGTGCCCATCCTGGTGGAGAAGTGTGCTGAATTCATCAGAGAGCACGGTCTGAGTGAGGAGGGCATCTTTCGCCTGCCAGGACAGGACAACCAGGTCAAACAGTTCAGAGAGGCCTTTGATGCCGGAGAGAGGCCGTCATTCCCCAGTGACACCGATGTCCACACGGTGGGGTCCTTACTTAAGCTGTACCTCAGAGAGCTTCCTGAACCTGTTGTGCCTTGGACGCAGTATCAGGCCTTCCTTGACAGCACTCTGACGCTGGATGCCGCCACTGCAGCGGGCAAAGAAAAGCTGGAGGTACAAATCAGCCATCTGCCGAAAGTGAACTACAACCTCCTGAGTTACATCTGCAGGTTCCTTTTTGAGGTCCAACAAAACTCAAAGGTGAATAAAATGAGCGTTGAGAATCTGGCCACGGTGATGGGAGTGAACCTGTTCAAGCCACAAGTGGAGGACGCCATCAGTATGATGAAGGGAACACCCATGATACAGAAGGTAATGACTGTGATGATCAGACACCATGAGCTGCTTTTCCCACCCTCTAAAGACGCGCAGCCATCTCCTCTACCGAGcaagaaaagcaaaagcaagAAGAGCAGTAATCCTCGCAGTTTTGTGGGCTGGGAGTCTGCAGAGTGTGAAGTGTCCTCCCTTTCTGAGTCTCCGGAGGAAGAGGAAATGGACACACCTGAGGAAGAGAGGAAGGACCTGTGTTCATCTGACACAGGATCAGAAGGCACGCCTCTTTCTCCTTCCTCGCCATTTTCATCCGCAACCGACACATGGCCCGACAGCCCCAGAAAAAGAACACAAACTCTACCCAGCTTAGGCTGTCTGCCAGCGGGAAAAGGCCGTGAGCCTTCTTGGGAACGCTGGAGCAGGTTCCAGGAGAGCTTTAAcgagaatgaagaaaaaacattctcaGAGGACATCTTTAAATTACTCGACCTGCAGAAAGTGACACTATTTTCTGGAGGGCAGAAAAGTGAAAAGGAAAATGTTGAAGGACAGAAGGACACAGACTTGAATAAGACAGGTAGTGATGTCGTGGACAAACAGATAGATGCTGTAAAAACACAGGCACAGAGCACAACCCTTCCCAAACCTCGGGTAAGGAACGATGTGACTGCACCAGCTGTGAGCCAAGAGAAGCCAGCGGAACCTTCAACAGAACCTGCTCTAAAGAAAAGCAATGCAGCACCACTAGAAAACACAGACTCAACAAACATCATCAACAGTCTCCAGCAGAAGAACAAAGAGCTGAGCGCTACAGTGACGGAGCTGCAGGCAGCACTAGAGGCAGAGAAACGCTGCAAAGCTGCATTAGAGATCCTACTACGCAATGCAGAGCGCAGCAGGGATGAAGCACTTGTGCGCAATGAGCAGCTGAACCGAGAGATTCAAGAGTTCCTCAACAGACCGACTGCTGGACCGTCATAGTCACGCCATCACGCgaacatatttcaaatgaagTCCTGTGTAGCCCCTCAGGAGTACACCACAAGCTGGACAACTCCATCTGGTTTTACACCATGAACTGTTCAGCAGAATGCCTTCAGAGTAAGACTATTGATAATGTCCATCTCCCAGGACTTCGATACAGTATATGACACCTTATGTAAAGAAATGACAGATTTGATTTACTTAGACGTAAGACAAGATGTGAATTTTGAAGCAATGCAGTATTTTACTAAACAGTTGAGAGTATTTAATGACCTTTTTATTGAAACGTTATCGTATTTTATAATGAATCTCAAAGAAATAACTCcccaacaaaaactaaaatggtcagatttgtttttaaagagcctTTTTATCGACAAGGAGAAGTCTTTTCCTccgttaattattaattataaattaaaacaaaatctgttGTGGCAAAGGTTTAACATAGTTATTGTTTATGTTCTCACCGGACTGTGTTAGTCTCCATTAGAGTTTGTGAACAATTTGATGAAAAGggcaaaaagcacaaaatgtgGATTACTGTCAGTAAATAAACCGTTTTTATCTGG

Function

NR:

description
PREDICTED: rho GTPase-activating protein 25

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0005096 GTPase activator activity molecular_function

KEGG:

id description
K20642 ARHGAP22_24_25; Rho GTPase-activating protein 22/24/25

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239594.1 True 3101 mRNA 0.46 15 12381364 12394042

Neighbor

gene id symbol gene type direction distance location
LOC122345273 NA coding downstream 17649 12356836 ~ 12363715 (-)
LOC122344659 NA coding downstream 107726 12272217 ~ 12273638 (-)
LOC122345275 LOC107597264,LOC107672815,LOC107742671 coding downstream 184987 12190702 ~ 12196377 (-)
LOC122344646 NA coding downstream 204149 12173037 ~ 12177215 (-)
LOC122345274 NA coding downstream 208362 12169594 ~ 12173002 (-)
cds2 cds2,LOC107597267,LOC107654641,LOC107741205,LOC107663217 coding upstream 2240 12396282 ~ 12409668 (-)
hs3st1l2 hs3st1l2,LOC107557106,LOC107741295,LOC107743333,LOC107654638,LOC107663220,LOC107578102 coding upstream 18299 12412341 ~ 12428382 (-)
si:dkey-174n20.1 si:dkey-174n20.1,LOC107696056,LOC107741298,LOC108255501,LOC108444311,LOC105893868 coding upstream 116524 12510566 ~ 12513965 (-)
limk2 limk2,LOC107743341,LOC107654635,LOC107696070,LOC107741211 coding upstream 146242 12540284 ~ 12560679 (-)
LOC122345379 NA coding upstream 246335 12640377 ~ 12642522 (-)
G35812 arhgap25,LOC107597266,LOC107743332,LOC107654642 non-coding downstream 124552 12255480 ~ 12256812 (-)
G35805 NA non-coding downstream 132656 12226918 ~ 12248708 (-)
G35804 NA non-coding downstream 133855 12228582 ~ 12247509 (-)
G35797 NA non-coding downstream 198385 12181487 ~ 12182979 (-)
LOC122345280 NA non-coding downstream 201614 12179051 ~ 12179750 (-)
G35922 LOC107696053,LOC107654639,LOC107743336,LOC107595973 non-coding upstream 49745 12443787 ~ 12445220 (-)
G35923 NA non-coding upstream 54172 12448214 ~ 12450765 (-)
G35928 NA non-coding upstream 69864 12463906 ~ 12515550 (-)
G35949 NA non-coding upstream 138348 12532390 ~ 12537802 (-)
LOC122345380 NA non-coding upstream 208174 12602216 ~ 12606938 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other downstream 61679 12317803 ~ 12319685 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other downstream 211954 12165403 ~ 12169410 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other downstream 565420 11795656 ~ 11815944 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other downstream 728737 11583780 ~ 11652627 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other downstream 914242 11419955 ~ 11467122 (-)
G35936 NA other upstream 107872 12501914 ~ 12505958 (-)
G36047 NA other upstream 659802 13053844 ~ 13054857 (-)
h3f3c h3f3b,H3F3A,LOC101073377,LOC105909691,LOC107388308,LOC105888650 other upstream 1185019 13579061 ~ 13582290 (-)
lrch2 lrch2,LOC107700248,LOC107746375,LOC107710563 other upstream 1260252 13654294 ~ 13699226 (-)
G36298 NA other upstream 1323082 13717124 ~ 13718543 (-)

Expression


Co-expression Network