mrps31


Basic Information

Item Value
gene id mrps31
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 10969502 ~ 10972314 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239664.1
tcccctggaccAGTTTATGAACTGTTTCCTTTTTATGTTGCAGTCCGATTTAATTATCCTAAAGTAATGTATGTGATACAGACAGACTAACATAAATAACATTACTGAATGTTCAAACACAGTTACAAACGAGACGTAAGTTGTCTTTTAGTCGTTGAAATAGGCGCCCGGAACCTTAATAGGTCTCAAGCAGGCGCCTGCCGGATGGTTGATTGAGCTGCACAGGGAAACGCGCATGGACGACATTGAGATCTTCTGAGAGGGGCAATCATGTATAGAAGattgttaaaaaacatttatcagattCGTAATGGATTAGTGCATGCGCAGAATGCACGATTACCTTTCACAAAATGTAAAGATGGGGACGGTTTTGCTCCTGTTATCTGgaCCCCATGTACAGCAAGGCCATTAGGAACCAGTAGCACCTCTTTTAGTGAAAATAATGAGAACTCCACATCCCTGTCAaaagacaaaggaaaaaaatcagaAGAGAATGAGGCGAAAGCAGAGGATAACACTGATGGAGAGAAGAGCACCGAAATTTCAACTAAAACATTGACCTCACAGGTAGAGACCGAACCAGAGGTTAAACCTGAGGACAGCAAACtggttaaaaagacaaaaagtggCAAGGAGAATCTTTTGGAGCTACTTGGGGCAATGAAGGTAGAGGTCACAACAGTACGCAAAGACAGATCCTCAACCGcttcacaaataaataagaagccCAAACATGAGCCCATGGAAAGTGCACACAGTATGTTCCAGCGTGCCACAGCTGAAGGGTTACAACAACATGGGACGTTGAATCCAGGGCTGGTTGCTGCAGTCTCTGCCGCTGCTTCCACACTGCCCAACAGACATCAGGCAGAGTCAGAGCTTCTCAAGCAGCTGAGGAAACACGAAGCCGTGCCTGACACCCAGAAGAGAGCAGATGGACAGAACATATTAAACACAATTGCCAAAATGAAGGTCAAAAAGAGGTCAAATGCCAGATCAAACCTTCAACCTACAAGCCAGATTTGTTTTGATGATGATGGAAAGGGATATACTGAAGACAGAGACATTAGCACTGAATTTGCAGTCAGcagagggaaaagtCTCGTCACTGGTAAGAGGTTGAACATCTTTACTGTAGGCATGGAGCAGGCATCAGAGCTGGGCCCTACTCTTTGGGACATTGAACTAGCTCATCAGATTGTTCAGGCAACAAATCAAGCGCCTCGAAATGGCTTTGAGGAGATGATCCAGTGGACCAAAGACGGCAAACTTTGGCAATATCCAATCAACAACGAGGCTGgCCTGGAGGAAGAGGCGAGTGTGCCTTTCCATGAGCATGTGTTCCTGGAGAAGCACCTTGAATCATTTCCCCAGCAGGGTCCAGTCAGGCACTTCATGGAGCTTGTAATCACAGGACTCTCTAAGAATCACCACCTCACCgttcaacagaaaaaagaacATATCGACTGGTTCAGAGACTACTTCCAACAGAAAGATGATGTCCTGCAAGAAGCAGAGGCATAACGATCACACAAAGACAGAAGAAGCTTTCGGAGTTCACTGTACTGAATACCCTACAGCCAACTAGTTCAGATCTTGACAGCAGTAGTAATTAGCAAACTCCATTAAGCACCTGGAAGTAATAATTGCATCAATTACCAGATTAAGAGGGTTCATCATTGATCTTGTTTAATGGTCCGCTGCGTCATAGTAATATTCAACCTGCTTCAAATTTTCAGGTTTTTGTTGCTTACTAAAACTTATTGTAACAGATGTTCAATAAAATCTGGATGTTGTGAATGCTGCTCATAATTCACTTTACTTGTTGCTTTTTCCACAAtacatgttgttccaaagcagTGTAAATAAAGAATAACTCCAATTTGCAA

Function

NR:

description
28S ribosomal protein S31, mitochondrial isoform X1

GO:

id name namespace
GO:0005763 mitochondrial small ribosomal subunit cellular_component
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K17410 MRPS31; small subunit ribosomal protein S31

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239664.1 True 1892 mRNA 0.43 7 10969502 10972314

Neighbor

gene id symbol gene type direction distance location
tm4sf21a si:ch211-137i24.10,LOC107687679,LOC107744498,LOC107672738,LOC107726377,LOC107599980 coding upstream 5898 10960340 ~ 10963604 (+)
sox19a sox19a,LOC107687705,LOC107744453,LOC107726363,LOC107672743,LOC107599979,LOC107592398 coding upstream 21087 10946115 ~ 10948415 (+)
eif4a1b eif4a1b,if4a1,LOC107599941,LOC107592294,LOC107726387,LOC107687701,LOC108443969,LOC106560692 coding upstream 27859 10934545 ~ 10941643 (+)
plscr3a plscr3a,LOC107744496,LOC107599978,LOC107687706,LOC107592298,LOC107726366 coding upstream 43472 10922870 ~ 10926030 (+)
phf23a phf23a,LOC107599938,LOC107744450,LOC107687682,LOC107726379,LOC107592297,LOC107672758 coding upstream 46720 10918773 ~ 10922782 (+)
capga capga,LOC107599981,LOC107687675,LOC107744500,LOC107726365,LOC107592395,LOC107672725 coding downstream 9273 10981587 ~ 10986048 (+)
si:ch211-114c12.5 LOC107592362,LOC107726358,LOC107744476,LOC107599968,LOC107672711 coding downstream 14591 10986905 ~ 10992885 (+)
pdha1a pdha1a,LOC107599948,LOC107672749,LOC107592287,LOC107726384 coding downstream 48007 11020321 ~ 11028005 (+)
rps6ka3a rps6ka3a,LOC107687667,LOC107599949,LOC107726369,LOC107672778,LOC107592284 coding downstream 56773 11029087 ~ 11041122 (+)
eif1axa eif1axb,EIF1AX,eif1ax,LOC102359197,LOC107726370 coding downstream 68826 11041140 ~ 11044571 (+)
G35202 NA non-coding upstream 131135 10838012 ~ 10838367 (+)
G35197 NA non-coding upstream 153201 10813457 ~ 10816301 (+)
G35081 NA non-coding upstream 421877 10547221 ~ 10547625 (+)
G35043 NA non-coding upstream 635694 10333219 ~ 10333808 (+)
G35042 NA non-coding upstream 639180 10329889 ~ 10330322 (+)
G35267 NA non-coding downstream 214940 11187254 ~ 11187694 (+)
G35274 kat5,LOC106563454,LOC107597226 non-coding downstream 232186 11204500 ~ 11209405 (+)
G35304 prps1a,LOC103031347,LOC107733231,LOC107597240,LOC107672505 non-coding downstream 410356 11382670 ~ 11387170 (+)
G35309 NA non-coding downstream 433214 11405528 ~ 11405761 (+)
G35311 NA non-coding downstream 441727 11414041 ~ 11414688 (+)
senp3a senp3a,LOC107744451,LOC107687680,LOC107599939,LOC107672741,LOC107592295,LOC107726393 other upstream 35749 10926823 ~ 10933753 (+)
osbp2b si:ch211-106a19.1,LOC107687692,LOC107744438,LOC107726355,LOC107672777,LOC107592367 other upstream 233443 10717531 ~ 10736059 (+)
fam219ab fam219ab,LOC107744421,LOC107595023,LOC107673386,LOC107752501,LOC107672754,LOC107592322,LOC107673387,LOC107595025,LOC107744422,LOC107592323 other upstream 829769 10064217 ~ 10139733 (+)
si:ch211-102c2.4 NA other upstream 1170144 9796381 ~ 9799358 (+)
man1b1b man1b1b,man1b1,LOC107709694,LOC107681241,LOC107560236,LOC107757969,LOC107690671,LOC107587425 other upstream 2097984 8864202 ~ 8871518 (+)
map7d2a LOC107687666,LOC107592282,LOC107599951,LOC107754729,LOC107726367,LOC107672739 other downstream 74165 11046479 ~ 11064446 (+)
LOC122346180 LOC107597222,LOC107680408,LOC107732624,LOC107592391,LOC107732598,LOC107687664,LOC107747817,LOC107687696 other downstream 163909 11136223 ~ 11150225 (+)
gria3a gria3a,LOC107597231,LOC107672342,LOC107732609,LOC107680378,LOC107733225,LOC107592272 other downstream 294328 11266642 ~ 11303431 (+)
glra4b glra4b,LOC107741187,LOC107565418,LOC107680382,LOC108442052,LOC108259905 other downstream 666202 11638516 ~ 11652683 (+)
smarca1 smarca1,LOC107597262,LOC107672796,LOC107741199,LOC107663213,LOC103034185,LOC105028962,LOC105893234,LOC106603320 other downstream 951914 11924228 ~ 11943110 (+)

Expression


Co-expression Network