golph3a (golph3,LOC107681169,LOC107552603,LOC107746803,LOC107602021)


Basic Information

Item Value
gene id golph3a
gene name golph3,LOC107681169,LOC107552603,LOC107746803,LOC107602021
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 15268676 ~ 15279272 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239676.1
CACTGCTGTTCTCGTCACGGCTGGTCGCCATATTAAACCTGACGGAATCGGCAACGCTCCGCGGTAGGGATCGCGAGGGGCCCCTCTCCAAAACAAATCCCGATTTACACTTTCATTCCCCCTAATTCACCCAGGGAATTATTTATGCATCGGACCGAATAAGTCAGTCTTTTCTCAGACGGGAGTTGTCTGGGAAGGAGGTTTAGTTTTAGTGTTGAGATGAGTACTTTGACCCAGCGAAGCTCCGGCCTGGTGCAAAGACGCACCGAGGCTTCGCGCAGCGCTGCGGCCGCAGACAGAGACCGCGGATCCGGCGACGAGGACTACGAGCCCCGGCGTGCAGACGAGCAGGACGACGATGACAGCGGCGATTCCAAGGAAACCAGACTGACCCTGATGGAAGAAGTGCTGCTGTTGGGCTTGAAAGACCGCGAGGGATACACCTCCTTCTGGAATGACTGCATTTCATCAGGCCTGCGGGGCTGCATGCTCATTGAGCTGGCCTTACGAGGGAGACTGCAGCTGGAGGCCTGTGGCATGAGGAGGAAAAGCCTGCTTGCCCGGAAGgttatttGTAAGTCTGATGCTCCGACGGGGGATGTGTTGTTGGATGAGGCTCTGAAACACATAAAAGACACTCAACCGCCCGAAACCGTGCAGAGCTGGATAGAGTTACTGAGCGGTGAGACATGGAACCCGTTGAAGCTTCACTATCAGCTGCGTAACGTCCGAGAGCGCCTGGCTAAGAACCTCGTAGAGAAGGGCGTCCTCACCACCGAGAAACAAAACTTTCTTCTGTTCGACATGACTACACACCCCCTcaccaataataatattaagcagcgcCTTATTAAGAAGGTGCAGGAGGCCGTACTGGACAAGTGGGTGAACGACCCCCACCGAATGGACAAGCGTCTTCTGGCCCTTATATTCCTCGCCCATTCCTCTGACGTACTAGAGAACGCGTTCGCCCCGCTGCTGGATGACCAGTACGATCTGGCCATGAAGAGAGTACGACAGCTGCTGGACCTGGAGCCCGAGGGCGAGAGCATGAAGAACAACACCAATGAGCTGCTGTGGGCTGTGGTGGCCGCCTTCACCAAATGAAGCGGCTTCTGTGCGATGAAATGTAAAACGGTCAGACTGGCAAAATCCGCTTTTGAGAATTGGTTGACCTGGTGTGTCAAAACGGGAGTCTCAAGTTTTCTTTCCTTGTAGATATTCCTTCCTCGCTAATCTCTCTGCAAGATCTATGATTGGGTTtctcgttgtttttttttttttttgataaggGGACCGCTTTATTTTGTCCTCGTCGAATGCAACTGGGTACCTTCCCACCGTGGACCGTTGGAACGTTTACCATTTGCATCGCCACGCgaaatggcttttttaaaattcttttctCGTCTAGACAGCTGCGTCGGGTGCCTAATAGATTTTTTGCAATTGGAGAACTAAGCAAGCCCCTTGTTATCCGTTTTGTGCGTTTAATTAAAACTGATCAATCTGCGTGTGGTACGACTCAACAGATGCTAAAGAAATAAAGTACACTGCAGtgcatcatcattattattattatttttttgccttcATGCTAATAATGAAGCctgaaaagaaaccaaaaaggATAATATCCTGGTATGATAACAGATTAGTAGTTTATGGCAAAAGGTAGTGCTAACAGTGCGTCACAttcaaacattattaaaacacaactaaatgctaaatttagGGATGAGTTCAGGCTGTTAGAGGACCTGTCCAGTATTTGCTGGATCtattatacgttttttttttttttattatcattccCTCCGATTCCCTCGATTCTTTCCGTTCTGTCCATAACACCCCACAACTTCAATTTCTACCTCTTCACACATTTATTGTGGCGATTTCTCATGAGAgttctgatttatttaaatgtactttaatgtGCCTGAGATTGGTTACAGGACGTGTAGCTCTCAAGGTGCAGTAGCTCTTCGTGACGTGGCATTAATGGAGCTAGATTCAGAAATTGGTTGTAACTCATTTCCTCAGAGGCCTCATAACCTTTGTATATGCTACCAAACACTAAATTGGAGGACCACGAGAGTTTCATTCTAAGAAGTCTGCTCTCTGAAAATAAAGATACGTATGGCGTACAGCTTCACTTTCTTTAGATATTTTTCCGCTGATATATAAAAGTACTCACGGTCAAAAGGGAAGTTTTATGGCGGAGTTTTGAATGTCATACACTTTTCACTTCATGTACTCATCAAAAAACATCATAACCTTTCAAAATTTGACTTTTATATGTAAGAACAGATTCCTCCATTTTCTCAAGTCAGTATATTTTTGAtagtatgttattataattagcTGATTGGACCTAGTATGGTAGGATGGATTGGCATTCTGTCACAATCTAGTTTAATCTGTATAGTTTATGTATTCATACTGCATACCATATGAGCAAACTCTGTATCAATCTTCATTTTGCCTGGCATGTAAAAGCTAGCTCGAGCATgtcttaattgttttttttttgtttgttttttttacactatgAAGATGTTGAAAAAGCCTTTGTTCAATGATCATATTTCAATGTttagttgtcatttttattcttttttttttatagcaataatttcaaaaatcaacatgcttttgttttgctgttcatttctttcaaaatgatGGTAAAATGCTTGCCTCACAATAGTTAATTGTATGTAGCGATGGTCTGGGAAATCCACCAATTGTTTGGAAGAGTCGACTTGAGACATGGGGAATTTTTGAAGCGTCTGAAAGTGTCTCAGagtgaaagaaaattaaaatcgTGTGTAGCTTTAGAACTCACTATAAAGGGACCCCAATGTATATACTTTCTTATTACCATGAAATAAACTATGGTCTTGAAAGTGCCTCAAACATcagctgttatttattttgtgaagaaGCAAGTGCTGCTTTTGATGCATCAGGTTTgttaaatcacttttaatacTGTTAATATAACAAATTCAGACAAATGCCATAAATGAACACATCCGTAAATACTGTAAGTTATGTTTTTGTACTAAAACGATAATTGGTCGTTttagaatgtaatgtaaatttaaatttgtttaattgcaCACTAAGTCTGAATCTTTtgcatgtgaaaaaataaatacaaccacGCATTGCTTCAATCAAATTTATACACAGCCTCCAAAACTTTCatctgtcattaaaaaaattggatCGGATTTGATTGTCTGTGTTTTAAAGTAGCAAGCATTTTGATGGGAAAGGATGGCAAAt

Function

symbol description
golph3 Enables enzyme binding activity and phosphatidylinositol-4-phosphate binding activity. Involved in several processes, including Golgi vesicle transport; cell adhesion molecule production; and cellular response to rapamycin. Located in Golgi apparatus subcompartment; cytosol; and mitochondrion.

NR:

description
PREDICTED: Golgi phosphoprotein 3

GO: NA

KEGG:

id description
K15620 GOLPH3, GPP34; golgi phosphoprotein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239676.1 True 3297 mRNA 0.42 4 15268676 15279272

Neighbor

gene id symbol gene type direction distance location
parp8 parp8,LOC107746800,LOC107661236,LOC107708633 coding downstream 68839 15174388 ~ 15199837 (-)
isl1a isl1,LOC107661270,LOC107708623,LOC107599171,LOC107602011 coding downstream 140504 15121996 ~ 15128172 (-)
fsta fst,fsta,LOC107746798,LOC107599173,LOC107708632,LOC107602023,LOC107661233 coding downstream 245220 15016899 ~ 15023456 (-)
hspb3 hspb3,LOC107746796,LOC107599178,LOC107744878,LOC107602000 coding downstream 348737 14918926 ~ 14919939 (-)
snx18a snx18,snx18a,LOC107599175,LOC107661231,LOC107746794,LOC107744868,LOC107602026 coding downstream 350912 14906584 ~ 14917764 (-)
mtmr12 mtmr12,LOC107746804,LOC107552602,LOC107708634,LOC107602020 coding upstream 942 15280214 ~ 15292882 (-)
eef2l2 eef2l2,LOC107681082,LOC107746808,LOC107552597,LOC107676651,LOC108414462,LOC107708638,LOC108255789 coding upstream 171752 15451024 ~ 15457371 (-)
akr1a1a akr1a1a,LOC107602015,LOC107708643,LOC107676648,LOC105901177,LOC108414433 coding upstream 192820 15472092 ~ 15477073 (-)
dnajb5 dnajb5,LOC107746810,LOC107681063,LOC107708641 coding upstream 200908 15480180 ~ 15493670 (-)
epg5 epg5,LOC107746812,LOC107681055,LOC107676662,LOC107708644 coding upstream 226694 15505966 ~ 15529346 (-)
G36811 NA non-coding downstream 99318 15169047 ~ 15169358 (-)
G36714 NA non-coding downstream 363055 14905385 ~ 14905621 (-)
G36708 NA non-coding downstream 387611 14880865 ~ 14881065 (-)
G36696 NA non-coding downstream 569723 14698736 ~ 14698953 (-)
G36631 NA non-coding downstream 616283 14652095 ~ 14652393 (-)
G36967 NA non-coding upstream 282450 15561722 ~ 15562078 (-)
G36968 NA non-coding upstream 282876 15562148 ~ 15562363 (-)
G36969 NA non-coding upstream 284826 15564098 ~ 15565262 (-)
G36986 NA non-coding upstream 434403 15713675 ~ 15713975 (-)
G37067 NA non-coding upstream 449931 15729203 ~ 15729893 (-)
pdzd2 pdzd2,LOC107746802,LOC107681406,LOC107661237 other downstream 3731 15205951 ~ 15264945 (-)
LOC122345141 LOC107752369,LOC107661250,LOC107567461 other downstream 966295 14292063 ~ 14302381 (-)
znhit1 znhit1,LOC107752359,LOC107661214,LOC106567874 other downstream 986056 14279674 ~ 14282620 (-)
rnf214 LOC107663407,LOC107746393,LOC107599207,LOC107596114,LOC107734124,LOC107661199,LOC107599223 other downstream 1211971 14040982 ~ 14056705 (-)
tmprss13b LOC107746439,LOC107663381,LOC107599230 other downstream 1259140 14001934 ~ 14009536 (-)
zfr zfr,LOC107746805,LOC107681158,LOC107552600,LOC107602019 other upstream 14584 15293856 ~ 15308440 (-)
npr3 LOC107681138,LOC107746807,LOC107552598,LOC107602007,LOC107708637,LOC107661273 other upstream 70744 15350016 ~ 15367413 (-)
alkbh2 alkbh2,LOC107746816,LOC107552593,LOC107676640 other upstream 288747 15568019 ~ 15578967 (-)
cenpv cenpv,LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other upstream 424261 15703533 ~ 15709430 (-)
emc6 emc6,LOC107680863,LOC107746824,LOC107552584,LOC107553592,LOC107552561 other upstream 445755 15725027 ~ 15728108 (-)

Expression


Co-expression Network