LOC122345512 (LOC107752366,LOC107661220,LOC107663395,LOC107599216,LOC107663363,LOC107746851)


Basic Information

Item Value
gene id LOC122345512
gene name LOC107752366,LOC107661220,LOC107663395,LOC107599216,LOC107663363,LOC107746851
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 14455417 ~ 14458914 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239706.1
AAGAATGCATTCCTTTTGAGATGGTGGCATCACGCCCTGGAAAAGCAGGTGAGAAGTTAAACTGGACAGAGGACAACGTCGTCTATAACCTCGCGAAGGTACAAGAGCGTAAAGAAGAGaATACTCCAATTCAGAAATGTCAGACTTGTGgGATGACTTGGAGAATTTTGCTCGCGCTCCCTGTTCTTTCACAGCAGCGCCAGGGGAGAGAGGTACTATTAAAGCCAAAGCGAACTTTAACGTCGGTGAAGATGTTGCAGCGCTTCGTAAAGCAATTGAAGGCATAgGTACAACTGAGAAGACACTGATAGACATACTGACTCACCGGAGCAGCAGTCAGAAGCAGGCTATTTCAAAGGCGTATGAAGAAACCACAAAGAGGATTCTTGTTAATGACCTAAAAGGCGACACACGTGGCAGTTTAGAGGACGTGCTTGTTGCTCTCGCAAGAACGCCTGCAGTTAATGACgctaaatggataaataaagcAATCAAAGGGGCTGGAACGGACACCAACGTCCTGATAGAAATACTTGCCTCACGgacaaacaaacagatcaaGGAGCTGTCTGCAGCATTTGCTGAGGaaacaaagaaaactcTAATGCAAAAGCTAAAGACAGAGGTTTCAGGAGATTTTGGAAAAGCCATCCTTCTGCTGGCTGAGGGTGCAAGGGATGAAAGCACCAATGTGAATGCAGACAAGGCTAGAGAGGATGCAAAGGCCCTCTATCAAGCAGGCGAGAAAAGACTGGGAACTGATGAGTCCAAGTTCATTGAGATCCTCTGTAAAAGGAGCATCCCTCACCTGAGACAAACAATACTGGAGTACAAAAACATCAGTGGCAAGACTTTGCAGAAGAGCATTGAGAAGGAAATATCTGGTGATCTGGAGAAACTGCTTGTTGCCATCGTGAAGTGTGTGATGAGTACTCCTGCATACTTTGCTGAAAAACTCCACAAAAGCATGAAGGGAGTAGGTACAGATGAAACCACTCTGACCAGAGTAATGGTCAGCCGTGGAGAGGTTGACATGCTGGACATCAGAGCTGAATTCAAGAAGCTCTACAAGCATTCACTCTACAAGGAAATAGGTtcAGATGCGTCTGGCAGCTACGGTGACAGCTTGAAGATGATTTGTGGAGCAGAAGACTAGCCTAACCCTCGCGATACTttataaaatggttttattaataGAATTTTTAGGAACACATCTTAGGAAATGTAGCccttatatttacagttttctttttggtAGTGATTGGTGCCTCACAACAGCAGGCGTGACTGTAATAGATACTTAAAAacttgaaacattaaaattgtgctgatgaaatatgcatgttaaaattTGTAAACACAAAACCGTGGAATGTTAGAGATACGTTACGGTACTACCTGTCATTTCAGTGCGTTCACCCAAAGATAAAATTAATACAGAAAACCttttcattacattaaaaatatcattacatgCTCACAAGGCTCCCACTCTTTGCTTTTTGATACTGCCTTCAAACCTCTTGCAATCTTATGTAAAACAGATGGGTTTCCTGGTATACTCAGGGATAAGCATAAGCTTCTGCTTTTTGTGTCTTCTTCTGTCTAATCCTGATTCCTCTATACCAAAGGTCCTTACAATTACCTCTGTAATTGTGTACAGTTCTGGAAATGCTTTGgaatacaaaattaatttagcatatAGTCTTCTTTTTCCTACTATTTAATAAGCACAAGTGTCTTTTCAATCCATTCTCAGTAAGCAAATCTTCTGTGTGAGTGTAACATGCAGATATCAGGATCCACCCCCTCTCTTATCTTTGGCTGGGAAGGtcaattcatattaaaatgacaatgttGCTGAA

Function

NR:

description
PREDICTED: annexin A3-like isoform X2

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function
GO:0005544 calcium-dependent phospholipid binding molecular_function
GO:0004859 phospholipase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239706.1 True 1865 mRNA 0.42 14 14455417 14458914

Neighbor

gene id symbol gene type direction distance location
fras1 fras1,LOC107663364,LOC107661219,LOC107752371,LOC107746850 coding upstream 133 14385667 ~ 14455284 (+)
LOC122344908 LOC107599196,LOC107663386 coding upstream 128650 14324343 ~ 14326767 (+)
cxcl11.8 NA coding upstream 132720 14321528 ~ 14322697 (+)
LOC122345144 NA coding upstream 134494 14315699 ~ 14320923 (+)
LOC122345143 NA coding upstream 140816 14311644 ~ 14314601 (+)
LOC122345511 LOC107663395,LOC107599216,LOC107567471,LOC107752366,LOC107752365,LOC107661220 coding downstream 540 14459454 ~ 14463721 (+)
bmp2k bmp2k,LOC107752364,LOC107746780,LOC107599185,LOC107661221 coding downstream 7594 14466508 ~ 14493471 (+)
prdm8b prdm8,prdm8b,LOC107744860,LOC107746783,LOC107661225,LOC107663390 coding downstream 172008 14630922 ~ 14635776 (+)
cfap299 si:ch211-57h10.1,LOC107602013,LOC107599193,LOC107746788,LOC107663380,LOC107661266 coding downstream 195687 14654601 ~ 14699071 (+)
bmp3 LOC107663379,LOC107599191,LOC107746787,LOC107744876 coding downstream 241990 14700904 ~ 14706295 (+)
G36510 NA non-coding upstream 108582 14345884 ~ 14346835 (+)
G36509 LOC107567468,LOC107752360,LOC107661217 non-coding upstream 111648 14343164 ~ 14343769 (+)
G36507 LOC107663397,LOC107567468,LOC107599188,LOC107746779 non-coding upstream 112910 14341923 ~ 14342507 (+)
G36503 LOC107599196,LOC107663386 non-coding upstream 128663 14321556 ~ 14326754 (+)
G36420 LOC107663407,LOC107599223,LOC107746393,LOC107661199 non-coding upstream 407923 14046777 ~ 14047494 (+)
G36573 NA non-coding downstream 6985 14465899 ~ 14466241 (+)
G36570 NA non-coding downstream 34634 14493548 ~ 14528933 (+)
G36644 NA non-coding downstream 268315 14727229 ~ 14727743 (+)
G36653 NA non-coding downstream 319047 14777961 ~ 14778375 (+)
G36651 wdfy3,LOC107681281,LOC107661255,LOC107744871,LOC107599213 non-coding downstream 353559 14812473 ~ 14815463 (+)
mrpl1 LOC107663378,LOC107746869,LOC107752362,LOC107599195 other upstream 105426 14347562 ~ 14349991 (+)
LOC122345214 NA other upstream 117652 14333023 ~ 14337765 (+)
LOC122345142 NA other upstream 150113 14300043 ~ 14305304 (+)
G36495 NA other upstream 162917 14290420 ~ 14292500 (+)
ins ins,LOC107596207 other upstream 469711 13984097 ~ 13985706 (+)
fgf5 fgf5,LOC107599194,LOC107746784,LOC107663393,LOC107661278,LOC107602014,LOC107744874 other downstream 187031 14645945 ~ 14652911 (+)
G36640 NA other downstream 259618 14718532 ~ 14720487 (+)
LOC122345998 LOC107718355,LOC107676655,LOC107746825,LOC107680877,LOC107553589,LOC107552586 other downstream 1932883 16391797 ~ 16395562 (+)
G37227 NA other downstream 2015794 16474708 ~ 16560732 (+)
G37228 ncor2,LOC107742750 other downstream 2027706 16486620 ~ 16561741 (+)

Expression


Co-expression Network