LOC122345546 (LOC107699749,LOC107587493,LOC107756319,LOC107703272,LOC107567144,LOC107720200)


Basic Information

Item Value
gene id LOC122345546
gene name LOC107699749,LOC107587493,LOC107756319,LOC107703272,LOC107567144,LOC107720200
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 17354929 ~ 17359741 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239777.1
TGAGTCAAgttcacagaaaaaaactgatGCAGTTGGATCCAACAagaataaaatgacattaaaccTCACCTCACATAGTCAATGAAAAGTCAGTAAATAACCTTAATGTATTATCACAaacattacacacaaaaaaaatgtatatatgtatatattaaatgacttaATCTTCTTATGAAATACTAATCAGTTTCCTTTCATTGTCCTTACAGGTCAAAGATCAGCTGCCACATTTGAAGGCTATTGTTCAGTACAAAGGTGAACTGGAGCAGAAAGTACCAAACGTTTATACGTGGGCTGAATTTATGAAGCTAGGAGCGGACGTCCCTGATTCTGAGCTGGATGTGTTGATAGACAGTCAAAAGGCCAACGAGTGCTGCACATTAATCTACACATCAGGCACCACAGGAAATCCCAAAGGGGTCATGCTCAGCCACGATAATATCACTTGGACAGCCGGTGTTGGAGGACGCATGCTCAATCTGAAGATGGCTGAGGAACAACTTGTGAGCTACTTGCCCTTGAGTCACGTGGCAGCCCAGATCATAGACATTTGGCTCTGCATGATGTTTGCAGGCGTAACCAGTTTCGCCGAGCCAGATGCTCTGAAGGGCTCTCTGGCCAACACTCTGAGAGAGGTTCGTCCCACAAGCTTTTTGGGAGTTCCTCGAGTGTGGGAAAAAATGCAGGAAGCAATGAAAGCCGTTGGTGCGAAGTCGTCCATCGCAAAGAGGAAAATTGCAGACTGGGCCAAGGGGATCGGACTTCAAGCTAGCTATAATGCCATGAATGGTGATTCCTCAGTGCCGTGGGGCTTCACGTTGGCCAATGCCCTGGTTTTCAAGAACGTCAGAAAAGCTCTGGGTCTTGACCGCTGTAAGGCTTGTTTCACAGGCGCAGCTCCGATCACCAAAGACACACTGGAGTACTTCATGAGCCTTTACATACCTCTCTTTGAGTTGTACGGCATGAGCGAGAGCACTGGACCTCATACCATCTCCTGGGCTGGGGGATATCGCATTATGAGTTGTGGTAAGGTGTTGTCTGGCTGCAAAACTAAGTTAGACAAGCCAGAAACTGATGGGACCGGTGAGATCTGTTTCTGGGGGAGACATGTGTTTATGGGATACCTGAACATGCCAGAAAAGACAGAGGAGGCATTGGATACAGATGGGTGGCTTCACTCGGGAGACCTGGGCAAACATGATAAAGATGACTTCCTGTTCATCACTGGCAGAATAAAAGAATTGATCATTACTGCTGGTGGAGAAAATATTCCACCTGTCCCTATTgaggatgcattaaaagaaGAGGTGTCAATCATCAGCAATGTCATGCTGGTTGGAGATAAAAAGAAGTTTCTGTCTATGCTACTTACACTCAAGtgtAACGTTGATGACAATGGAGACCCCACAGATGAACTGACCCCGTTAGCTGTGGAGTTTTGTCGGCGGCATGGTGTAATTGCCAGCAAAGTCTCAGAAATCATTAACAAAAAAGAACCAGCCATTTACAAAGCCATCCAGGAGGGCATAGACTGCATAAATGCCAAAGCTACTTCCAATGCCCAGAGAGTCCAAAAGTGGACCATCCTTCAACGAGACTTCTCCATATCCGGTGGAGAACTTGgtCCAACCATGAAGCTCAAAAGACCTGTCGTCAGTAAAATGTACGAAGAAGATATAAACAAATTTTATGGTGAATAACAGAAGAACTCCAATATTTGATCAGTAATCTATTTCGCTCACTCCAGGGCTTCCATTGGACCTCACTATTATAACactttacttattattttacacaaacTTTGCATCATTTTCTACCAATAGATTTATTACCTTTGCTGccattttatattaagtggtcttaaatactatatatacttACATCAATATATAAGTCcagtgtacttattgtgttcatattgtattgcaaaacacttctgctgctattgagaAGGTTAGAGACAGAGTGGTAGTATGGGTaagtttaagggtgggttaaggtatAAGGGAAGGGTAAACAAGTGTAATTATCAGTGTAATTAAAGAAactaattacagatgtaattaatgtacacaataaatgcattgtaccaacttattaatttattaaatgtaagcacatagtggttaaggccacctaatataaaacatatcttTATCTTTTACAAAGTGCCAATTAATCAGTTTTATATCTCTCTGTTTGCCATTATATCTGGTTCTGTATATTCTGTacaatatatgaaaatgaagtTTATTGTATGTAAGTGGTATCACTGTGCAATTACTGTGCATATTACTGTTAAGAAGTAAATGTGTCTAAATATAAATAGGCTTAGATTGAGTGTGATGCTGTCTGTACAGATCAGTGCTGTTGCTTGCACACAGAGTATTGTTGGTCCTTTAAACAGTTACAGCCGAACTGTTAAGAAGCATGTGACAATTGTTCGTTCTCTTGCTGTTGAAATTTCACCCAGCACATTGAATATTTATAA

Function

NR:

description
PREDICTED: long-chain-fatty-acid--CoA ligase ACSBG2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239777.1 True 2497 mRNA 0.41 9 17354929 17359741

Neighbor

gene id symbol gene type direction distance location
LOC122344736 apba1,apba1a,LOC107587500,LOC107720269,LOC107756314,LOC107567151 coding downstream 9314 17329196 ~ 17345615 (-)
LOC122345238 cfap157,LOC107587652,LOC107672550,LOC107731015 coding downstream 33871 17316381 ~ 17321058 (-)
LOC122344899 LOC107663257,LOC107742022,LOC107570120 coding downstream 94982 17258466 ~ 17259947 (-)
LOC122344715 vps37b,LOC107673398,LOC107594993,LOC107656485,LOC107587312,LOC107709855,LOC107721558 coding downstream 938924 16413057 ~ 16416005 (-)
si:ch211-204c21.1 LOC107746847,LOC107561610,LOC107680600,LOC107719926,LOC107660265,LOC107553608 coding downstream 1216766 16115390 ~ 16138163 (-)
LOC122344712 ckmt2b,ckmt2,LOC107720280 coding upstream 22290 17382031 ~ 17384148 (-)
ccnh ccnh,LOC107753181,LOC107553924,LOC107720191,LOC107660965 coding upstream 227082 17586823 ~ 17592357 (-)
tmem161b tmem161b,LOC107720188,LOC107660970,LOC107669514,LOC107753179,LOC107553926 coding upstream 256472 17616213 ~ 17632162 (-)
mef2cb mef2cb,mef2c,LOC107720185 coding upstream 326760 17686501 ~ 17755766 (-)
mblac2 mblac2,LOC107669518,LOC107720183,LOC107753186 coding upstream 533767 17893508 ~ 17895933 (-)
G37363 NA non-coding downstream 2519 17351315 ~ 17352410 (-)
G37340 NA non-coding downstream 189777 17162677 ~ 17165152 (-)
G37310 NA non-coding downstream 463739 16890704 ~ 16891190 (-)
G37309 NA non-coding downstream 464611 16889042 ~ 16890318 (-)
LOC122345772 NA non-coding downstream 495953 16858600 ~ 16858976 (-)
LOC122345155 NA non-coding upstream 286355 17646096 ~ 17686024 (-)
G37427 NA non-coding upstream 308518 17668259 ~ 17692145 (-)
G37439 NA non-coding upstream 532216 17891957 ~ 17893318 (-)
G37453 adgrv1,LOC107669515,LOC107660972 non-coding upstream 586806 17946547 ~ 17946764 (-)
G37455 adgrv1,LOC107660972,LOC107669515 non-coding upstream 594759 17954500 ~ 17954747 (-)
LOC122344738 acsl1b,LOC107571490,LOC107678619,LOC107758469,LOC107552354,LOC108274927 other downstream 4549 17346469 ~ 17350380 (-)
LOC122345693 NA other downstream 494998 16787809 ~ 16859931 (-)
G37277 ncam1a,LOC107681081,LOC107548183,LOC107756101 other downstream 641762 16687260 ~ 16713167 (-)
G37258 ncor2,LOC107687981,LOC107684513,LOC107753125 other downstream 721808 16596855 ~ 16633121 (-)
LOC122344728 uprt,LOC107733222,LOC107672530,LOC107680369,LOC107748634 other downstream 976414 16376266 ~ 16378515 (-)
mtx3 cmya5,mtx3,LOC107699728,LOC107703257,LOC107720274,LOC107756304,LOC107555495,LOC107756305,LOC107720223,LOC107703259 other upstream 1815722 19175463 ~ 19183978 (-)
kcnt1b LOC107720246,LOC107699766,LOC107672542 other upstream 2505278 19865019 ~ 19935576 (-)
G38058 NA other upstream 2691918 20051659 ~ 20055798 (-)
G38140 si:ch211-236k19.4,LOC107552622,LOC107740829,LOC107699705,LOC107731026,LOC107672535,LOC107587659 other upstream 2765848 20125589 ~ 20127390 (-)
LOC122345844 ppil3 other upstream 3034990 20394731 ~ 20396734 (-)

Expression


Co-expression Network