ankra2 (ankra2,LOC107757524,LOC107655931,LOC107596806,LOC107718646,LOC107700928,LOC107596181)


Basic Information

Item Value
gene id ankra2
gene name ankra2,LOC107757524,LOC107655931,LOC107596806,LOC107718646,LOC107700928,LOC107596181
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 6096157 ~ 6099701 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239783.1
CTCTGCCTTcgaaaaaactttatttacacTCTACCTCAAGAACAACCCGTCGTTTCAAAACAAACGATATCAATAACTCGgtacaaaaaaaaaagcttcgtTCTGCATGTGACCTAAACACCGTCCACTTACTGTAAGGGTCTGATCCTATTTAAAGGCTGTAGTAGCTTCTTTTGGAAGATCACGGATCCCAAGCGGCGAATGGCATCGGAGGAGATGGAGGGTTTGTGCCCTTTACCAGAGGTGACGGGCATCAAGGTGGAGCCGTCGGTCAGCATTGGCTCAGGAGAAGATGCCAACTCGCACAACGCCATGGGCATAAAGTTCATACTACCCAACCGCTTCGACATGAACGTGTGTTCGCGCTTTGTGAAGTCGCTGAACGAGGAAGACAGTAAAAACATCCAGGACCAGGTGAACTCCGATCTTGAGGTGGCCTCCGTGTTATTTAAAGCGGAGTGTAATATCCAGACGTCTCCCTCACCTGGTATTCAGGTTAGGCACGTTTACACGCCATCAACCACCAAGCACTTCTCTCCAATAAAGCAGTCCACCACGCTCACCAACAAACACCGTGGAAACGAGGTCTCATCCACACCGCTGCTCGTCCACTCACTGTCTATACATCAGCTGGCAGCGCAAGGAGAGATGGTGTTCTTAGCCAGTCGAATAGAACAAGAGTCTGTGATAAACCTGCAGGATGAAGAGGGATTCACCCCACTGATGTGGGCGGCAGCTCACGGACAGATCGCTGTGGTCGAGTTCCTGTTACAGAGTGGTGCGGATCCTCTCCTCTTGGCCAAGGGAAGGGAAAGCGCACTGTCCCTGGCCTGCAGTAAAGGGTACACGGATATCGTCAGAATGCTTATCGACTGTGGAGTTGACGTTAACGAGTATGATTGGAATGGCGGAGCACCGCTGCTCTATGCGGTGCATGGTAATCACGTTCGCTGTGTGGAAATCCTCTTAGAGAGTGGGGCCGACCCAACCATGGAGTCAGACTCTGGCTTCAATGCTATGGATATGGCTGTGGCGATGGGACACCGAAACGTCCAACAGGTATTAGAGGGTCATCTCCTGAAGCTTCTGCAAGGCATCAAAGAATAACCATAGCAACAAGAAGAATCTGAGTGAATATTTGAGTGTTGATTATGATGAAGGGAATGCCATTTAACGTTTGCTGAATActttatatgaatttttttttttttaaatctatcttTAAAGAAGCCAATGCACAGAGCAACATGACAATTGACGAGATCAGAACTTCAGCGTTTTGAAcctactgatttttttttttttattcaatgtgAAGTGTGTTATTAGGTCACTGATTTCTACCTAGTTACAATGTGTATTtgaaaagatatttattttgccatttaaagcaaaaaaaataagctgTTTCACATTAAACTTGACTGGCGTTATGGtttataaattaagtaaatcTAAATCTGGGCACTTTAGAATTAATCACGTGGAAAAGAacaggatgaaaaaaaatcagtacCAGTTCAGCTGTCACACTTATTGCCATTTTGTCCAGTTGTGCTACAACACTGTAAATAAACCTTAATTTATACTGAA
>XM_043239784.1
CATTCACCAAACATAGACACAGCTGACTCCACCCTCTCTGCCTTcgaaaaaactttatttacacTCTACCTCAAGAACAACCCGTCGTTTCAAAACAAACGATATCAATAACTCGGCTGTAGTAGCTTCTTTTGGAAGATCACGGATCCCAAGCGGCGAATGGCATCGGAGGAGATGGAGGGTTTGTGCCCTTTACCAGAGGTGACGGGCATCAAGGTGGAGCCGTCGGTCAGCATTGGCTCAGGAGAAGATGCCAACTCGCACAACGCCATGGGCATAAAGTTCATACTACCCAACCGCTTCGACATGAACGTGTGTTCGCGCTTTGTGAAGTCGCTGAACGAGGAAGACAGTAAAAACATCCAGGACCAGGTGAACTCCGATCTTGAGGTGGCCTCCGTGTTATTTAAAGCGGAGTGTAATATCCAGACGTCTCCCTCACCTGGTATTCAGGTTAGGCACGTTTACACGCCATCAACCACCAAGCACTTCTCTCCAATAAAGCAGTCCACCACGCTCACCAACAAACACCGTGGAAACGAGGTCTCATCCACACCGCTGCTCGTCCACTCACTGTCTATACATCAGCTGGCAGCGCAAGGAGAGATGGTGTTCTTAGCCAGTCGAATAGAACAAGAGTCTGTGATAAACCTGCAGGATGAAGAGGGATTCACCCCACTGATGTGGGCGGCAGCTCACGGACAGATCGCTGTGGTCGAGTTCCTGTTACAGAGTGGTGCGGATCCTCTCCTCTTGGCCAAGGGAAGGGAAAGCGCACTGTCCCTGGCCTGCAGTAAAGGGTACACGGATATCGTCAGAATGCTTATCGACTGTGGAGTTGACGTTAACGAGTATGATTGGAATGGCGGAGCACCGCTGCTCTATGCGGTGCATGGTAATCACGTTCGCTGTGTGGAAATCCTCTTAGAGAGTGGGGCCGACCCAACCATGGAGTCAGACTCTGGCTTCAATGCTATGGATATGGCTGTGGCGATGGGACACCGAAACGTCCAACAGGTATTAGAGGGTCATCTCCTGAAGCTTCTGCAAGGCATCAAAGAATAACCATAGCAACAAGAAGAATCTGAGTGAATATTTGAGTGTTGATTATGATGAAGGGAATGCCATTTAACGTTTGCTGAATActttatatgaatttttttttttttaaatctatcttTAAAGAAGCCAATGCACAGAGCAACATGACAATTGACGAGATCAGAACTTCAGCGTTTTGAAcctactgatttttttttttttattcaatgtgAAGTGTGTTATTAGGTCACTGATTTCTACCTAGTTACAATGTGTATTtgaaaagatatttattttgccatttaaagcaaaaaaaataagctgTTTCACATTAAACTTGACTGGCGTTATGGtttataaattaagtaaatcTAAATCTGGGCACTTTAGAATTAATCACGTGGAAAAGAacaggatgaaaaaaaatcagtacCAGTTCAGCTGTCACACTTATTGCCATTTTGTCCAGTTGTGCTACAACACTGTAAATAAACCTTAATTTATACTGAA

Function

symbol description
ankra2 Predicted to be involved in regulation of gene expression. Predicted to be active in nucleus. Orthologous to human ANKRA2 (ankyrin repeat family A member 2).

NR:

description
unnamed protein product

GO: NA

KEGG:

id description
K21486 ANKRA2; ankyrin repeat family A protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239783.1 True 1593 mRNA 0.44 9 6096157 6099666
XM_043239784.1 False 1551 mRNA 0.45 9 6096157 6099701

Neighbor

gene id symbol gene type direction distance location
foxd1 foxd1,LOC107598200,LOC107718663,LOC107700903,LOC107596217,LOC107757501 coding downstream 6601 6086801 ~ 6089556 (-)
trnak-uuu_104 NA coding downstream 139786 5956299 ~ 5956371 (-)
slc6a4b slc6a4b,LOC107654599,LOC107597334,LOC107595929,LOC107672619,LOC107741230,LOC108434249,LOC106580268 coding downstream 186166 5898895 ~ 5909991 (-)
git2a git2,git2a,LOC107595928,LOC107752141,LOC107597287 coding downstream 211993 5859279 ~ 5884164 (-)
gltpa gltpa,gltp,LOC107752155,LOC107654619,LOC107741237,LOC107597288,LOC107595968 coding downstream 246518 5843678 ~ 5849639 (-)
enc1 enc1,LOC107655934,LOC107757521,LOC107570861,LOC107700930,LOC107596864 coding upstream 132565 6232266 ~ 6243818 (-)
gfm2 gfm2 coding upstream 155717 6255418 ~ 6263302 (-)
aif1l aif1l,LOC107718642,LOC107570864,LOC107757519,LOC107596876 coding upstream 166036 6265737 ~ 6281395 (-)
lamc3 lamc3,LOC107596886,LOC107718641,LOC107700933,LOC107757520,LOC107570860 coding upstream 183073 6282774 ~ 6343615 (-)
ttll11 ttll11,LOC107700937,LOC107596909,LOC100002237,LOC107693816 coding upstream 663435 6763136 ~ 6792026 (-)
G33549 NA non-coding downstream 113354 5969242 ~ 5982803 (-)
G33544 NA non-coding downstream 136944 5953276 ~ 5959213 (-)
G33542 NA non-coding downstream 149283 5945989 ~ 5946874 (-)
G33533 NA non-coding downstream 198804 5896128 ~ 5897353 (-)
G33446 NA non-coding downstream 411873 5679683 ~ 5684284 (-)
G33610 NA non-coding upstream 72443 6172144 ~ 6172412 (-)
G33612 NA non-coding upstream 74146 6173847 ~ 6174113 (-)
G33615 NA non-coding upstream 78471 6178172 ~ 6178671 (-)
G33681 NA non-coding upstream 509748 6609449 ~ 6611492 (-)
G33683 LOC107588773 non-coding upstream 512039 6611740 ~ 6613055 (-)
G33175 NA other downstream 1473099 4622490 ~ 4623058 (-)
LOC122346168 srrm4,LOC107720865,LOC107702227,LOC107561260,LOC107656798 other downstream 1903076 4144856 ~ 4193081 (-)
piwil2 piwil2,LOC107560971,LOC107707823,LOC107702219 other downstream 2197579 3878650 ~ 3898578 (-)
coq5 coq5,LOC107560969,LOC107707852,LOC107656810,LOC107561264,LOC107702223,LOC107707851,LOC107560965,LOC101158254,LOC107755815,LOC107561265 other downstream 2343393 3744675 ~ 3752764 (-)
G32908 sema4c,LOC107697240,LOC107708238,LOC107699920 other downstream 3135980 2951462 ~ 2960177 (-)
G33758 LOC107596916,LOC107710760,LOC107700938,LOC107587412,LOC107693817 other upstream 724470 6824171 ~ 6826182 (-)
usp20 usp20,LOC107691016,LOC107693839,LOC107710745 other upstream 823145 6922846 ~ 6943203 (-)
G33998 LOC108444092 other upstream 1282645 7382346 ~ 7397153 (-)
LOC122345606 LOC107712378 other upstream 1607269 7706970 ~ 7711824 (-)
si:dkey-220k22.3 NA other upstream 1618864 7718565 ~ 7721758 (-)

Expression


Co-expression Network