zdhhc15a (zdhhc15a,LOC107733221,LOC107672497,LOC107597239)


Basic Information

Item Value
gene id zdhhc15a
gene name zdhhc15a,LOC107733221,LOC107672497,LOC107597239
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056703.1
NCBI id CM032072.1
chromosome length 32833783
location 11403003 ~ 11412347 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239807.1
GATAGAGAGGTTTGTGACGGTCATCGTGATGCTTCTGACCGCGTGCCTCCGGCGCTGCGCGCGGCTTCTTTACTGGATCCCGGTTACGATCGTTATTATGGTTGTGATGTGGTCATACTACGCATATGTCGTTCACTTCTGTTGGATCTTGCTTTCCTGTTCAACACAGAGAGTGGTGTTCCTTTGCCTGTTCCACATCTGTTTTGGAATGTTCTCATGGTCATTGTGGAAAACGTTATCCACTCCGCCATCTTCTCCATCCGTGGAGTTTCAGCTCTCCTCTTCAGACTCGCTGCTCTATGAGCAGGAGCCCGGCGGTGTGGAGAAGAGTCAGATCCTTCTGGAAATCTCCCAGAAGCTTTCAGTTCACACACGTACAGCAGCCGGAGCTATCAGGTTCTGTCATCACTGCCAATTGATAAAACCAGATCGCTGCCATCACTGTTCCATCTGCCAAATgtGTGTACTGAAGATGGATCATCATTGCCCATGGCTGAATAACTGTATTGGATTCTCCAACTATAAGTTCTTCATGCTCTTCCTGCTCTACTCACTTCTGTATTGCCTGCTTATCGTCGCAACAGTTACACCAACCTTCATCCAACTGTGGCTGggcAAACTATTTGATAGTTGCGTTAAACTGCATGTTTTGTTCCTGACATTGGTGTCGGCCATGTTTGCCGTCACCCTCTGTTTTTTGCTGTTCTTCCACATCTGGCTTCTGGCCAGCAACAAAACTACTCTTGAGTGGCTGTCAGTACCGTTTTTTGTGGATGGACCAGCAAGTGAGGCATTTGATGTGGGTGTCCAGGCAAACTTCATACAGGTGTTTGGAAAGAACAAGAGTCTCTGGCCATTGCCAGTATTCAGCAGTCAAGGGGATGGACAGTCTTTTCCCTTGAGATGCCACATGTCATCTCACAGCCCTTCAGAGATGAATGGAAATGGACATTGTGCCATAGAAGGAAGTGTGGTCTCACCTGAGGGGGTCTCTGTTACCATAGCAGTGGATGACTAGCAGTAATGAAATAAGGTTGACCGAACGGGTCATGTGACGGTGTCACGGAGAGTCTCTCAACTTGGGCGATTTCAGAAAGATCTCAGTCACAGGTTAAGGCGAGCGGCCCTCAGAGAGACGAGAGTGAGGGTGAACACCTGCCCGCATGCTCAGTTTTCACCTGGAACACTTCCTGCAGGAGCGATCAGGTCTCCGAAACCTCTCCTTTACTGATCAGGGTGTGAGAGAGCTTTATCAGGTGTCCCTGCTGAGTgatgatgtttttaattcattattttgtaGTGAAGTGAAGTTTGGTGTTTTTCTGTTGTGGGAATAGATTCTTGCCTTATGATGAGATGCTATTGAATAGCATCTTGTATGACATTAATAACAGATttgataaaaaagtaaacaaatacagtttatttaatacaaaatattttatttgtatttttctgttttgcatcACTGTTTAGGAACGGTTCGTTTCAATCCTGGTGGTGTCATAGATGAGCACGTGTATTTCAAAGATTATAATACATTTGCTCACATTAAGAATGgataaatatataacaacaaccccaaaaaaaaaatacagaggcCAGCCCCGATGTACCAAtcacacatacagagacactTGCTGTGGGCTGGTCAGGCTTTACCaggtggataaaaaaaaaaacgaatcaaAAACCAA

Function

symbol description
zdhhc15a Predicted to enable protein-cysteine S-palmitoyltransferase activity and zinc ion binding activity. Predicted to be involved in peptidyl-L-cysteine S-palmitoylation; protein targeting; and synaptic vesicle maturation. Predicted to be integral component of Golgi membrane. Predicted to be active in Golgi apparatus and endoplasmic reticulum. Human ortholog(s) of this gene implicated in non-syndromic X-linked intellectual disability 91. Orthologous to human ZDHHC15 (zinc finger DHHC-type palmitoyltransferase 15).

NR:

description
PREDICTED: palmitoyltransferase ZDHHC15-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component
GO:0016746 transferase activity, transferring acyl groups molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239807.1 True 1697 mRNA 0.45 12 11403003 11412347

Neighbor

gene id symbol gene type direction distance location
nexmifa si:dkey-114c15.7,LOC107597238,LOC107672487,LOC107733230,LOC107592265,LOC107748635 coding downstream 3396 11389320 ~ 11399607 (-)
prps1a prps1a,LOC107733231,LOC107672505,LOC103031347,LOC108443767,LOC105023901 coding downstream 14108 11382680 ~ 11388895 (-)
tbx5b tbx5b,LOC107733219,LOC107592384,LOC107672879,LOC107748638,LOC107680353,LOC107597309 coding downstream 21220 11373802 ~ 11381783 (-)
cfap73 LOC107680393,LOC107732615,LOC107592352,LOC107592387,LOC107578638 coding downstream 34389 11365078 ~ 11368614 (-)
tpcn1 tpcn1,LOC107732611,LOC107733226,LOC107672457,LOC107680394 coding downstream 41068 11348628 ~ 11361935 (-)
LOC122345557 LOC107733220,LOC107672464,LOC107680363,LOC107597312 coding upstream 69 11412416 ~ 11431060 (-)
cnga2b LOC107672575,LOC107733223,LOC107597245,LOC103911065,LOC108443773,LOC105893178 coding upstream 19513 11431860 ~ 11436272 (-)
chmp1b chmp1b,LOC107672547,LOC104940072,LOC101476317 coding upstream 26762 11439109 ~ 11442421 (-)
brwd3 brwd3,LOC107672566,LOC107680390 coding upstream 30275 11442622 ~ 11462761 (-)
radx LOC107672617,LOC107756553,LOC107680386,LOC107597314,LOC107680354 coding upstream 107228 11519575 ~ 11526037 (-)
G35434 NA non-coding downstream 72637 11304281 ~ 11330366 (-)
G35522 NA non-coding downstream 90173 11311549 ~ 11312830 (-)
G35450 NA non-coding downstream 152997 11249199 ~ 11250006 (-)
G35499 NA non-coding downstream 182112 11219968 ~ 11220891 (-)
G35501 fam76b,LOC107680374,LOC107592275,LOC107687655,LOC107597227 non-coding downstream 189266 11212039 ~ 11213737 (-)
G35592 LOC107741189,LOC107680392,LOC107565414,LOC107733362,LOC107597318 non-coding upstream 258610 11670957 ~ 11674817 (-)
G35594 NA non-coding upstream 280203 11692550 ~ 11694947 (-)
G35597 NA non-coding upstream 283844 11696191 ~ 11697674 (-)
G35599 NA non-coding upstream 285601 11697948 ~ 11699666 (-)
G35601 NA non-coding upstream 288886 11701233 ~ 11703708 (-)
slc25a15b slc25a15b,LOC107744499,LOC107687678,LOC107599942,LOC107726376,LOC107672737 other downstream 433885 10960311 ~ 10969118 (-)
G35384 NA other downstream 476840 10923927 ~ 10926163 (-)
G35371 znf703,LOC107599934,LOC107672788,LOC107744445,LOC107687685,LOC107726392,LOC107592299 other downstream 528939 10868364 ~ 10874064 (-)
G35122 NA other downstream 941294 10461208 ~ 10461709 (-)
si:dkey-96l17.6 si:dkey-96l17.6,LOC107672751,LOC107738297,LOC107592400,LOC107744487,LOC108434467,LOC105902719 other downstream 1067660 10324959 ~ 10335343 (-)
hmgn7 hmgn7,LOC107672554,LOC107756557,LOC107680402,LOC107565427,LOC107748629,LOC107597243,LOC108260037,LOC108442050 other upstream 7608 11419955 ~ 11467122 (-)
G35554 LOC100304549,LOC100219516,LOC106514001,LOC103353280 other upstream 171433 11583780 ~ 11652627 (-)
msna msna,msn,moes,LOC107746233,LOC107597256,LOC107672695,LOC107663223,LOC107741191 other upstream 383309 11795656 ~ 11815944 (-)
sh2d1aa sh2d1aa,LOC107713049,LOC107741293,LOC107663232,LOC107557102 other upstream 753056 12165403 ~ 12169410 (-)
G35825 tenm1,LOC107557119,LOC107713050,LOC107597323,LOC107741271 other upstream 905456 12317803 ~ 12319685 (-)

Expression


Co-expression Network